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Sequence Information

Primary Database Link P77626
Original Database ID ref NP_415951.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation recname: full=hth-type transcriptional
regulator sutr {eco:0000305};altname:
ful l=sulfur utilization regulator
{eco:0000303|pubmed:25406449};
Sequence Length 178

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region4-177
Protein Length178
Template PDB Code1y9qA
Template Region8-181
Sequence Identity41%
E-Value2.2e-9
GA3411
MPQS1.55793
z-DOPE-0.96
TSVMod MethodMSALL
TSVMod RMSD2.228
TSVMod NO350.897
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1y9qcrystal structure of hth_3 family transcriptional regulator from vibrio cholerae
DBALI1y9qA 
CATH1.10.260.40 Domain: 1y9qA01 lambda repressor-like DNA-binding domains (95%)
CATH2.60.120.10 Domain: 1y9qA02 Jelly Rolls (100%)
JenaImageLibrary1y9q 
Target Sequence
UniProtKBG2B8G6SubName: Full=Helix-turn-helix family protein;
InterProG2B8G6 
PFAMG2B8G6 
ProdomG2B8G6 
UniProtKBA0A069YRL1SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KDU49919.1};
InterProA0A069YRL1 
PFAMA0A069YRL1 
ProdomA0A069YRL1 
UniProtKBA0A070D2P6SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:KDV34612.1};
InterProA0A070D2P6 
PFAMA0A070D2P6 
ProdomA0A070D2P6 
UniProtKBA0A070TY35SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KDX34515.1};
InterProA0A070TY35 
PFAMA0A070TY35 
ProdomA0A070TY35 
UniProtKBA0A070UXX4SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KDX47172.1};
InterProA0A070UXX4 
PFAMA0A070UXX4 
ProdomA0A070UXX4 
UniProtKBA0A071AET3SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KDY57323.1};
InterProA0A071AET3 
PFAMA0A071AET3 
ProdomA0A071AET3 
UniProtKBA0A071C3X7SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KDY84658.1};
InterProA0A071C3X7 
PFAMA0A071C3X7 
ProdomA0A071C3X7 
UniProtKBA0A073T6M1SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KEL21721.1};
InterProA0A073T6M1 
PFAMA0A073T6M1 
ProdomA0A073T6M1 
UniProtKBA0A073VX59SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KEL78754.1};
InterProA0A073VX59 
PFAMA0A073VX59 
ProdomA0A073VX59 
UniProtKBA0A074I3A6SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KEO01977.1};
InterProA0A074I3A6 
PFAMA0A074I3A6 
ProdomA0A074I3A6 
UniProtKBA0A074J4Q4SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KEO12703.1};
InterProA0A074J4Q4 
PFAMA0A074J4Q4 
ProdomA0A074J4Q4 
UniProtKBA0A069WXM6SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KDU22412.1};
InterProA0A069WXM6 
PFAMA0A069WXM6 
ProdomA0A069WXM6 
UniProtKBA0A037Y292SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CDP71562.1};SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:KLX05892.1};SubName: Full=Transcriptional regulator
InterProA0A037Y292 
PFAMA0A037Y292 
ProdomA0A037Y292 
UniProtKBB3XAJ5SubName: Full=DNA-binding protein;
InterProB3XAJ5 
PFAMB3XAJ5 
ProdomB3XAJ5 
UniProtKBG1Z446SubName: Full=Helix-turn-helix family protein;
InterProG1Z446 
PFAMG1Z446 
ProdomG1Z446 
UniProtKBH4UIS3SubName: Full=Transcriptional regulator, HTH_3 family {ECO:0000313|EMBL:EHV59473.1};
InterProH4UIS3 
PFAMH4UIS3 
ProdomH4UIS3 
UniProtKBH4UZY6SubName: Full=Transcriptional regulator, HTH_3 family {ECO:0000313|EMBL:EHV61049.1};
InterProH4UZY6 
PFAMH4UZY6 
ProdomH4UZY6 
UniProtKBA7ZZZ2SubName: Full=DNA-binding protein;
InterProA7ZZZ2 
PFAMA7ZZZ2 
ProdomA7ZZZ2 
UniProtKBC4ZVH3SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC4ZVH3 
PFAMC4ZVH3 
ProdomC4ZVH3 
UniProtKBB1ISL3SubName: Full=Transcriptional regulator, XRE family;
InterProB1ISL3 
PFAMB1ISL3 
ProdomB1ISL3 
UniProtKBH4W9N3SubName: Full=Transcriptional regulator, HTH_3 family;
InterProH4W9N3 
PFAMH4W9N3 
ProdomH4W9N3 
UniProtKBB3H810SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:AIF60489.1};
InterProB3H810 
PFAMB3H810 
ProdomB3H810 
UniProtKBH4VVP7SubName: Full=Transcriptional regulator, HTH_3 family;
InterProH4VVP7 
PFAMH4VVP7 
ProdomH4VVP7 
UniProtKBH0QCN5SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProH0QCN5 
PFAMH0QCN5 
ProdomH0QCN5 
UniProtKBA0A079FIX4SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KDY58009.1};
InterProA0A079FIX4 
PFAMA0A079FIX4 
ProdomA0A079FIX4 
UniProtKBA0A079GJZ4SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KDY89696.1};
InterProA0A079GJZ4 
PFAMA0A079GJZ4 
ProdomA0A079GJZ4 
UniProtKBE7ISG2SubName: Full=Helix-turn-helix family protein;
InterProE7ISG2 
PFAME7ISG2 
ProdomE7ISG2 
UniProtKBE1HY55SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFK74983.1};
InterProE1HY55 
PFAME1HY55 
ProdomE1HY55 
UniProtKBD6HWM0SubName: Full=HTH-type transcriptional regulator ydcN {ECO:0000313|EMBL:EFE64057.2};
InterProD6HWM0 
PFAMD6HWM0 
ProdomD6HWM0 
UniProtKBC5W3M2SubName: Full=Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACT29237.1};
InterProC5W3M2 
PFAMC5W3M2 
ProdomC5W3M2 
UniProtKBE9WSN1SubName: Full=Helix-turn-helix protein;
InterProE9WSN1 
PFAME9WSN1 
ProdomE9WSN1 
UniProtKBE8YA15SubName: Full=Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADX50990.1};
InterProE8YA15 
PFAME8YA15 
ProdomE8YA15 
UniProtKBF9R2U5SubName: Full=Putative DNA-binding transcriptional regulator;
InterProF9R2U5 
PFAMF9R2U5 
ProdomF9R2U5 
UniProtKBF8XI19SubName: Full=DNA-binding protein {ECO:0000313|EMBL:EGU95600.1};
InterProF8XI19 
PFAMF8XI19 
ProdomF8XI19 
UniProtKBG1Y8P9SubName: Full=Helix-turn-helix family protein;
InterProG1Y8P9 
PFAMG1Y8P9 
ProdomG1Y8P9 
UniProtKBG1ZYQ5SubName: Full=Helix-turn-helix family protein;
InterProG1ZYQ5 
PFAMG1ZYQ5 
ProdomG1ZYQ5 
UniProtKBE1IMI1SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFO59335.1};
InterProE1IMI1 
PFAME1IMI1 
ProdomE1IMI1 
UniProtKBE2WUC7SubName: Full=Helix-turn-helix family protein;
InterProE2WUC7 
PFAME2WUC7 
ProdomE2WUC7 
UniProtKBD7YC53SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFK05135.1};
InterProD7YC53 
PFAMD7YC53 
ProdomD7YC53 
UniProtKBA0A080GQV2SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KEN91069.1};
InterProA0A080GQV2 
PFAMA0A080GQV2 
ProdomA0A080GQV2 
UniProtKBA0A080ICU6SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KEO25610.1};
InterProA0A080ICU6 
PFAMA0A080ICU6 
ProdomA0A080ICU6 
UniProtKBA0A0E1ZQ03SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:EIL30054.1};
InterProA0A0E1ZQ03 
PFAMA0A0E1ZQ03 
ProdomA0A0E1ZQ03 
UniProtKBA0A0E3MWJ0SubName: Full=Putative HTH-type transcriptional regulator YdcN {ECO:0000313|EMBL:AKA90473.1};
InterProA0A0E3MWJ0 
PFAMA0A0E3MWJ0 
ProdomA0A0E3MWJ0 
UniProtKBA0A0G3HHN5SubName: Full=Putative DNA-binding transcriptional regulator protein {ECO:0000313|EMBL:AKK12841.1};
InterProA0A0G3HHN5 
PFAMA0A0G3HHN5 
ProdomA0A0G3HHN5 
UniProtKBA0A0H3X8H9SubName: Full=DNA-binding transcriptional regulator {ECO:0000313|EMBL:AKM34946.1};
InterProA0A0H3X8H9 
PFAMA0A0H3X8H9 
ProdomA0A0H3X8H9 
UniProtKBC8TRG0SubName: Full=Predicted DNA-binding transcriptional regulator {ECO:0000313|EMBL:BAI25310.1};
InterProC8TRG0 
PFAMC8TRG0 
ProdomC8TRG0 
UniProtKBC6UH61SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC6UH61 
PFAMC6UH61 
ProdomC6UH61 
UniProtKBD8B7Q9SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFJ64892.1};
InterProD8B7Q9 
PFAMD8B7Q9 
ProdomD8B7Q9 
UniProtKBD7ZRE9SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFK26543.1};
InterProD7ZRE9 
PFAMD7ZRE9 
ProdomD7ZRE9 
UniProtKBG2AUD5SubName: Full=Helix-turn-helix family protein;
InterProG2AUD5 
PFAMG2AUD5 
ProdomG2AUD5 
UniProtKBG1ZIF3SubName: Full=Helix-turn-helix family protein;
InterProG1ZIF3 
PFAMG1ZIF3 
ProdomG1ZIF3 
UniProtKBA0A025GCX7SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:EYV62692.1};
InterProA0A025GCX7 
PFAMA0A025GCX7 
ProdomA0A025GCX7 
UniProtKBB1XDE5SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProB1XDE5 
PFAMB1XDE5 
ProdomB1XDE5 
UniProtKBA0A028C208SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:EZE29354.1};
InterProA0A028C208 
PFAMA0A028C208 
ProdomA0A028C208 
UniProtKBA0A070DIF1SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:KDV38019.1};
InterProA0A070DIF1 
PFAMA0A070DIF1 
ProdomA0A070DIF1 
UniProtKBA0A073FW70SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KEJ48757.1};
InterProA0A073FW70 
PFAMA0A073FW70 
ProdomA0A073FW70 
UniProtKBA0A079D0M8SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KDY15768.1};
InterProA0A079D0M8 
PFAMA0A079D0M8 
ProdomA0A079D0M8 
UniProtKBA0A0E0TXW9SubName: Full=Helix-turn-helix family protein YdcN {ECO:0000313|EMBL:AEE56433.1};
InterProA0A0E0TXW9 
PFAMA0A0E0TXW9 
ProdomA0A0E0TXW9 
UniProtKBC9QW31SubName: Full=Putative DNA-binding transcriptional regulator;SubName: Full=Transcriptional regulator, XRE family;
InterProC9QW31 
PFAMC9QW31 
ProdomC9QW31 
UniProtKBE1HLQ6SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFK91135.1};
InterProE1HLQ6 
PFAME1HLQ6 
ProdomE1HLQ6 
UniProtKBE7J1V0SubName: Full=Helix-turn-helix family protein;
InterProE7J1V0 
PFAME7J1V0 
ProdomE7J1V0 
UniProtKBF4M7D7SubName: Full=Helix-turn-helix family protein YdcN;
InterProF4M7D7 
PFAMF4M7D7 
ProdomF4M7D7 
UniProtKBA7ZLM7SubName: Full=DNA-binding protein {ECO:0000313|EMBL:ABV18782.1};
InterProA7ZLM7 
PFAMA7ZLM7 
ProdomA7ZLM7 
UniProtKBG2CLV5SubName: Full=Helix-turn-helix family protein;
InterProG2CLV5 
PFAMG2CLV5 
ProdomG2CLV5 
UniProtKBE9Y9S7SubName: Full=Helix-turn-helix protein {ECO:0000313|EMBL:EGB68830.1};
InterProE9Y9S7 
PFAME9Y9S7 
ProdomE9Y9S7 
UniProtKBA0A026GUY0SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:EYY73344.1};
InterProA0A026GUY0 
PFAMA0A026GUY0 
ProdomA0A026GUY0 
UniProtKBE9X429SubName: Full=Helix-turn-helix protein;
InterProE9X429 
PFAME9X429 
ProdomE9X429 
UniProtKBA0A027TKJ7SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:EZD25567.1};
InterProA0A027TKJ7 
PFAMA0A027TKJ7 
ProdomA0A027TKJ7 
UniProtKBA0A0A0F9C2SubName: Full=YcfA family protein {ECO:0000313|EMBL:KGM58963.1};
InterProA0A0A0F9C2 
PFAMA0A0A0F9C2 
ProdomA0A0A0F9C2 
UniProtKBE9W4G0SubName: Full=Helix-turn-helix protein;
InterProE9W4G0 
PFAME9W4G0 
ProdomE9W4G0 
UniProtKBH1F4J9SubName: Full=Putative uncharacterized protein;
InterProH1F4J9 
PFAMH1F4J9 
ProdomH1F4J9 
UniProtKBA0A027ZMW3SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:EZD99892.1};
InterProA0A027ZMW3 
PFAMA0A027ZMW3 
ProdomA0A027ZMW3 
UniProtKBA0A071CED2SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KDZ17178.1};
InterProA0A071CED2 
PFAMA0A071CED2 
ProdomA0A071CED2 
UniProtKBA0A0A8UC88SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CEK04675.1};
InterProA0A0A8UC88 
PFAMA0A0A8UC88 
ProdomA0A0A8UC88 
UniProtKBE0IVM9SubName: Full=Predicted DNA-binding transcriptional regulator {ECO:0000313|EMBL:ADT75039.1};SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:AFH11192.1};
InterProE0IVM9 
PFAME0IVM9 
ProdomE0IVM9 
UniProtKBF4SIB3SubName: Full=Putative oxidoreductase/putative repressor {ECO:0000313|EMBL:EGI11028.1};
InterProF4SIB3 
PFAMF4SIB3 
ProdomF4SIB3 
UniProtKBG2F6V2SubName: Full=Putative DNA-binding transcriptional regulator;
InterProG2F6V2 
PFAMG2F6V2 
ProdomG2F6V2 
UniProtKBA0A0E1LX21SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:AJF56270.1};
InterProA0A0E1LX21 
PFAMA0A0E1LX21 
ProdomA0A0E1LX21 
UniProtKBA0A0G2XEA1SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:AKI66749.1};
InterProA0A0G2XEA1 
PFAMA0A0G2XEA1 
ProdomA0A0G2XEA1 
UniProtKBC8UPM9SubName: Full=Predicted DNA-binding transcriptional regulator {ECO:0000313|EMBL:BAI35729.1};
InterProC8UPM9 
PFAMC8UPM9 
ProdomC8UPM9 
UniProtKBD8ALL7SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFK15976.1};
InterProD8ALL7 
PFAMD8ALL7 
ProdomD8ALL7 
UniProtKBD8BT89SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFI90115.1};
InterProD8BT89 
PFAMD8BT89 
ProdomD8BT89 
UniProtKBE6AYC9SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:EFV00138.1};
InterProE6AYC9 
PFAME6AYC9 
ProdomE6AYC9 
UniProtKBE7H8T7SubName: Full=Helix-turn-helix family protein;
InterProE7H8T7 
PFAME7H8T7 
ProdomE7H8T7 
UniProtKBC6EES9SubName: Full=Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACT29237.1};
InterProC6EES9 
PFAMC6EES9 
ProdomC6EES9 
UniProtKBE9XYT4SubName: Full=Helix-turn-helix protein;
InterProE9XYT4 
PFAME9XYT4 
ProdomE9XYT4 
UniProtKBG0FFA6SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:AEJ56480.1};
InterProG0FFA6 
PFAMG0FFA6 
ProdomG0FFA6 
UniProtKBA0A080G0B9SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KEN70500.1};
InterProA0A080G0B9 
PFAMA0A080G0B9 
ProdomA0A080G0B9 
UniProtKBA0A079EYK0SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KDY50359.1};
InterProA0A079EYK0 
PFAMA0A079EYK0 
ProdomA0A079EYK0 
UniProtKBA0A074HWI9SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KEN99481.1};
InterProA0A074HWI9 
PFAMA0A074HWI9 
ProdomA0A074HWI9 
UniProtKBE7T7E9SubName: Full=Transcriptional regulator yidN, Cro/CI family {ECO:0000313|EMBL:EFW62064.1};
InterProE7T7E9 
PFAME7T7E9 
ProdomE7T7E9 
UniProtKBH4VFE6SubName: Full=Transcriptional regulator, HTH_3 family;
InterProH4VFE6 
PFAMH4VFE6 
ProdomH4VFE6 
UniProtKBH4X504SubName: Full=Transcriptional regulator, HTH_3 family;
InterProH4X504 
PFAMH4X504 
ProdomH4X504 
UniProtKBB3IER6SubName: Full=DNA-binding protein;
InterProB3IER6 
PFAMB3IER6 
ProdomB3IER6 
UniProtKBA0A028E137SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:EZE53549.1};
InterProA0A028E137 
PFAMA0A028E137 
ProdomA0A028E137 
UniProtKBA0A069XEZ1SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KDU28272.1};
InterProA0A069XEZ1 
PFAMA0A069XEZ1 
ProdomA0A069XEZ1 
UniProtKBA0A070SL97SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KDX18561.1};
InterProA0A070SL97 
PFAMA0A070SL97 
ProdomA0A070SL97 
UniProtKBA0A070Y4G1SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KDX85354.1};
InterProA0A070Y4G1 
PFAMA0A070Y4G1 
ProdomA0A070Y4G1 
UniProtKBA0A073GF73SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:KEJ63415.1};
InterProA0A073GF73 
PFAMA0A073GF73 
ProdomA0A073GF73 
UniProtKBE7UMI2SubName: Full=Transcriptional regulator yidN, Cro/CI family;
InterProE7UMI2 
PFAME7UMI2 
ProdomE7UMI2