University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P77747.1
Original Database ID ref NP_415895.1
Organism Escherichia coli, Shigella sonnei, etc.
Annotation ompn_ecoli recname: full=outer
membrane protein n; altname: full=porin
ompn; fla gs: precursor
Sequence Length 377

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region22-377
Protein Length377
Template PDB Code5fvnA
Template Region1-342
Sequence Identity70%
E-Value0
GA3411
MPQS1.6518
z-DOPE0.47
TSVMod MethodMSALL
TSVMod RMSD3.317
TSVMod NO350.93
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB5fvn
DBALI5fvnA 
JenaImageLibrary5fvn 
Target Sequence
UniProtKBT9IBN9SubName: Full=Outer membrane porin OmpK36;
InterProT9IBN9 
PFAMT9IBN9 
ProdomT9IBN9 
UniProtKBA0A071C701SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:KDY86517.1};
InterProA0A071C701 
PFAMA0A071C701 
ProdomA0A071C701 
UniProtKBA0A071CA76SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:KDZ15340.1};
InterProA0A071CA76 
PFAMA0A071CA76 
ProdomA0A071CA76 
UniProtKBA0A071DCF7SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:KDZ38852.1};
InterProA0A071DCF7 
PFAMA0A071DCF7 
ProdomA0A071DCF7 
UniProtKBA0A073GWN3SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:KEJ69400.1};
InterProA0A073GWN3 
PFAMA0A073GWN3 
ProdomA0A073GWN3 
UniProtKBA0A073TDY0SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:KEL25188.1};
InterProA0A073TDY0 
PFAMA0A073TDY0 
ProdomA0A073TDY0 
UniProtKBA0A074HUJ2SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:KEN99635.1};
InterProA0A074HUJ2 
PFAMA0A074HUJ2 
ProdomA0A074HUJ2 
UniProtKBA0A079FD53SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:KDY54116.1};
InterProA0A079FD53 
PFAMA0A079FD53 
ProdomA0A079FD53 
UniProtKBA0A079FWX2SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:KDY66524.1};
InterProA0A079FWX2 
PFAMA0A079FWX2 
ProdomA0A079FWX2 
UniProtKBA0A079GTR9SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:KDY94397.1};
InterProA0A079GTR9 
PFAMA0A079GTR9 
ProdomA0A079GTR9 
UniProtKBA0A080GTK0SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:KEN91111.1};
InterProA0A080GTK0 
PFAMA0A080GTK0 
ProdomA0A080GTK0 
UniProtKBA0A071AZQ1SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:KDY62928.1};
InterProA0A071AZQ1 
PFAMA0A071AZQ1 
ProdomA0A071AZQ1 
UniProtKBA0A070XZV8SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:KDX84205.1};
InterProA0A070XZV8 
PFAMA0A070XZV8 
ProdomA0A070XZV8 
UniProtKBA0A069YZB5SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:KDU52545.1};
InterProA0A069YZB5 
PFAMA0A069YZB5 
ProdomA0A069YZB5 
UniProtKBI2YHR7SubName: Full=Outer membrane protein N;
InterProI2YHR7 
PFAMI2YHR7 
ProdomI2YHR7 
UniProtKBT9AYY5SubName: Full=Outer membrane porin OmpK36;
InterProT9AYY5 
PFAMT9AYY5 
ProdomT9AYY5 
UniProtKBI4J9R5SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:EIF85974.1};
InterProI4J9R5 
PFAMI4J9R5 
ProdomI4J9R5 
UniProtKBK5H7U2SubName: Full=Outer membrane protein N;
InterProK5H7U2 
PFAMK5H7U2 
ProdomK5H7U2 
UniProtKBL2ZAT6SubName: Full=Outer membrane protein N;
InterProL2ZAT6 
PFAML2ZAT6 
ProdomL2ZAT6 
UniProtKBL3LJ13SubName: Full=Outer membrane protein N;
InterProL3LJ13 
PFAML3LJ13 
ProdomL3LJ13 
UniProtKBL3RM93SubName: Full=Outer membrane protein N;
InterProL3RM93 
PFAML3RM93 
ProdomL3RM93 
UniProtKBL3WZ96SubName: Full=Outer membrane protein N;
InterProL3WZ96 
PFAML3WZ96 
ProdomL3WZ96 
UniProtKBA0A024L431SubName: Full=Outer membrane pore protein N, non-specific {ECO:0000313|EMBL:CDP71624.1};SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:CEE05861.1};SubName: Full=Porin {ECO:0000313|EMBL:AJB51
InterProA0A024L431 
PFAMA0A024L431 
ProdomA0A024L431 
UniProtKBA0A069XKM1SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:KDU30671.1};
InterProA0A069XKM1 
PFAMA0A069XKM1 
ProdomA0A069XKM1 
UniProtKBA0A080ICP2SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:KEO25550.1};
InterProA0A080ICP2 
PFAMA0A080ICP2 
ProdomA0A080ICP2 
UniProtKBA0A0E1M1F5SubName: Full=Outer membrane pore protein N, non-specific {ECO:0000313|EMBL:AJF56219.1};
InterProA0A0E1M1F5 
PFAMA0A0E1M1F5 
ProdomA0A0E1M1F5 
UniProtKBS1I7A2SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:EOW15749.1};
InterProS1I7A2 
PFAMS1I7A2 
ProdomS1I7A2 
UniProtKBS1K8H6SubName: Full=Outer membrane protein N;
InterProS1K8H6 
PFAMS1K8H6 
ProdomS1K8H6 
UniProtKBN2JCV7SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:ENA33776.1};
InterProN2JCV7 
PFAMN2JCV7 
ProdomN2JCV7 
UniProtKBC9QWX9SubName: Full=Outer membrane pore protein N, non-specific;SubName: Full=Porin Gram-negative type;Flags: Precursor;
InterProC9QWX9 
PFAMC9QWX9 
ProdomC9QWX9 
UniProtKBD8AMF5SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:EFK15668.1};
InterProD8AMF5 
PFAMD8AMF5 
ProdomD8AMF5 
UniProtKBM2PQ85SubName: Full=Outer membrane pore protein N, non-specific;
InterProM2PQ85 
PFAMM2PQ85 
ProdomM2PQ85 
UniProtKBL4P4N1SubName: Full=Outer membrane protein N;
InterProL4P4N1 
PFAML4P4N1 
ProdomL4P4N1 
UniProtKBT7KCL7SubName: Full=Outer membrane porin OmpK36;
InterProT7KCL7 
PFAMT7KCL7 
ProdomT7KCL7 
UniProtKBB1XCK4SubName: Full=Outer membrane pore protein N, non-specific;
InterProB1XCK4 
PFAMB1XCK4 
ProdomB1XCK4 
UniProtKBT8YZK9SubName: Full=Outer membrane porin OmpK36;
InterProT8YZK9 
PFAMT8YZK9 
ProdomT8YZK9 
UniProtKBS1D2T8SubName: Full=Outer membrane protein N;
InterProS1D2T8 
PFAMS1D2T8 
ProdomS1D2T8 
UniProtKBS0ZL47SubName: Full=Outer membrane protein N;
InterProS0ZL47 
PFAMS0ZL47 
ProdomS0ZL47 
UniProtKBS0YD59SubName: Full=Outer membrane protein N;
InterProS0YD59 
PFAMS0YD59 
ProdomS0YD59 
UniProtKBA0A0E3MWH7SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:AKA90420.1};
InterProA0A0E3MWH7 
PFAMA0A0E3MWH7 
ProdomA0A0E3MWH7 
UniProtKBA0A0G3HLN4SubName: Full=Outer membrane pore protein N, non-specific protein {ECO:0000313|EMBL:AKK12888.1};
InterProA0A0G3HLN4 
PFAMA0A0G3HLN4 
ProdomA0A0G3HLN4 
UniProtKBN2N3F5SubName: Full=Outer membrane protein N;
InterProN2N3F5 
PFAMN2N3F5 
ProdomN2N3F5 
UniProtKBN2N7L0SubName: Full=Outer membrane protein N;
InterProN2N7L0 
PFAMN2N7L0 
ProdomN2N7L0 
UniProtKBN2S412SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:ENB28817.1};
InterProN2S412 
PFAMN2S412 
ProdomN2S412 
UniProtKBN2SVC3SubName: Full=Outer membrane protein N;
InterProN2SVC3 
PFAMN2SVC3 
ProdomN2SVC3 
UniProtKBN3KKA1SubName: Full=Outer membrane protein N;
InterProN3KKA1 
PFAMN3KKA1 
ProdomN3KKA1 
UniProtKBN3P2A2SubName: Full=Outer membrane protein N;
InterProN3P2A2 
PFAMN3P2A2 
ProdomN3P2A2 
UniProtKBP77747RecName: Full=Outer membrane protein N;AltName: Full=Porin OmpN;Flags: Precursor;
InterProP77747 
PFAMP77747 
ProdomP77747 
UniProtKBS0UGG3SubName: Full=Outer membrane protein N;
InterProS0UGG3 
PFAMS0UGG3 
ProdomS0UGG3 
UniProtKBC4ZVB9SubName: Full=Outer membrane pore protein N, non-specific;
InterProC4ZVB9 
PFAMC4ZVB9 
ProdomC4ZVB9 
UniProtKBS1KX71SubName: Full=Outer membrane protein N;
InterProS1KX71 
PFAMS1KX71 
ProdomS1KX71 
UniProtKBL3VGR4SubName: Full=Outer membrane protein N;
InterProL3VGR4 
PFAML3VGR4 
ProdomL3VGR4 
UniProtKBE1HRG1SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:EFK89547.1};
InterProE1HRG1 
PFAME1HRG1 
ProdomE1HRG1 
UniProtKBM8RVN7SubName: Full=Outer membrane protein N;
InterProM8RVN7 
PFAMM8RVN7 
ProdomM8RVN7 
UniProtKBE9WSH8SubName: Full=Gram-negative porin;
InterProE9WSH8 
PFAME9WSH8 
ProdomE9WSH8 
UniProtKBL8BUQ8SubName: Full=Outer membrane protein N;
InterProL8BUQ8 
PFAML8BUQ8 
ProdomL8BUQ8 
UniProtKBP76854RecName: Full=Outer membrane protein N;AltName: Full=Porin OmpN;Flags: Precursor;
InterProP76854 
PFAMP76854 
ProdomP76854 
UniProtKBG2CLP4SubName: Full=Outer membrane protein N;
InterProG2CLP4 
PFAMG2CLP4 
ProdomG2CLP4 
UniProtKBH4UZT6SubName: Full=Outer membrane protein C {ECO:0000313|EMBL:EHV61147.1};
InterProH4UZT6 
PFAMH4UZT6 
ProdomH4UZT6 
UniProtKBH4VVJ5SubName: Full=Outer membrane protein N;
InterProH4VVJ5 
PFAMH4VVJ5 
ProdomH4VVJ5 
UniProtKBI2I472SubName: Full=Outer membrane pore protein N, non-specific;
InterProI2I472 
PFAMI2I472 
ProdomI2I472 
UniProtKBK3JKV7SubName: Full=Outer membrane protein N;
InterProK3JKV7 
PFAMK3JKV7 
ProdomK3JKV7 
UniProtKBI2Y2Y3SubName: Full=Outer membrane protein N;
InterProI2Y2Y3 
PFAMI2Y2Y3 
ProdomI2Y2Y3 
UniProtKBT8TFJ0SubName: Full=Outer membrane porin OmpK36;
InterProT8TFJ0 
PFAMT8TFJ0 
ProdomT8TFJ0 
UniProtKBS1LD30SubName: Full=Outer membrane protein N;
InterProS1LD30 
PFAMS1LD30 
ProdomS1LD30 
UniProtKBT2N5S2SubName: Full=Outer membrane protein N;
InterProT2N5S2 
PFAMT2N5S2 
ProdomT2N5S2 
UniProtKBD8BSD1SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:EFI90433.1};
InterProD8BSD1 
PFAMD8BSD1 
ProdomD8BSD1 
UniProtKBH4WAB9SubName: Full=Outer membrane protein C;
InterProH4WAB9 
PFAMH4WAB9 
ProdomH4WAB9 
UniProtKBI0ZRH2SubName: Full=Outer membrane protein;
InterProI0ZRH2 
PFAMI0ZRH2 
ProdomI0ZRH2 
UniProtKBK3I543SubName: Full=Outer membrane protein N;
InterProK3I543 
PFAMK3I543 
ProdomK3I543 
UniProtKBM7VVK7SubName: Full=Outer membrane pore protein N, non-specific;
InterProM7VVK7 
PFAMM7VVK7 
ProdomM7VVK7 
UniProtKBM8YYN1SubName: Full=Outer membrane protein N;
InterProM8YYN1 
PFAMM8YYN1 
ProdomM8YYN1 
UniProtKBG2AU77SubName: Full=Outer membrane protein N;
InterProG2AU77 
PFAMG2AU77 
ProdomG2AU77 
UniProtKBH9USV7SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:AFG40600.1};
InterProH9USV7 
PFAMH9USV7 
ProdomH9USV7 
UniProtKBT9J9U8SubName: Full=Outer membrane porin OmpK36;
InterProT9J9U8 
PFAMT9J9U8 
ProdomT9J9U8 
UniProtKBT9KJP5SubName: Full=Outer membrane porin OmpK36;
InterProT9KJP5 
PFAMT9KJP5 
ProdomT9KJP5 
UniProtKBI2ZXS6SubName: Full=Outer membrane protein N;
InterProI2ZXS6 
PFAMI2ZXS6 
ProdomI2ZXS6 
UniProtKBG2B900SubName: Full=Outer membrane protein N;
InterProG2B900 
PFAMG2B900 
ProdomG2B900 
UniProtKBM9G076SubName: Full=Outer membrane protein N;
InterProM9G076 
PFAMM9G076 
ProdomM9G076 
UniProtKBS1A1Y2SubName: Full=Outer membrane protein N;
InterProS1A1Y2 
PFAMS1A1Y2 
ProdomS1A1Y2 
UniProtKBH4UIM1SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:EHV59421.1};
InterProH4UIM1 
PFAMH4UIM1 
ProdomH4UIM1 
UniProtKBS1PIJ5SubName: Full=Outer membrane protein N;
InterProS1PIJ5 
PFAMS1PIJ5 
ProdomS1PIJ5 
UniProtKBH4VF84SubName: Full=Outer membrane protein N;
InterProH4VF84 
PFAMH4VF84 
ProdomH4VF84 
UniProtKBS0VJV1SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:EOU67740.1};
InterProS0VJV1 
PFAMS0VJV1 
ProdomS0VJV1 
UniProtKBL4WP10SubName: Full=Outer membrane protein N;
InterProL4WP10 
PFAML4WP10 
ProdomL4WP10 
UniProtKBT7ZSM9SubName: Full=Outer membrane porin OmpK36;
InterProT7ZSM9 
PFAMT7ZSM9 
ProdomT7ZSM9 
UniProtKBI2R3D2SubName: Full=Outer membrane protein N;
InterProI2R3D2 
PFAMI2R3D2 
ProdomI2R3D2 
UniProtKBN2ECJ7SubName: Full=Outer membrane protein N;
InterProN2ECJ7 
PFAMN2ECJ7 
ProdomN2ECJ7 
UniProtKBG0FEN9SubName: Full=Outer membrane protein N (Porin ompN) {ECO:0000313|EMBL:AEJ56416.1};
InterProG0FEN9 
PFAMG0FEN9 
ProdomG0FEN9 
UniProtKBK5H5B0SubName: Full=Outer membrane protein N;
InterProK5H5B0 
PFAMK5H5B0 
ProdomK5H5B0 
UniProtKBL3KQN2SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:ELE01248.1};
InterProL3KQN2 
PFAML3KQN2 
ProdomL3KQN2 
UniProtKBL3VUW8SubName: Full=Outer membrane protein N;
InterProL3VUW8 
PFAML3VUW8 
ProdomL3VUW8 
UniProtKBL4A088SubName: Full=Outer membrane protein N;
InterProL4A088 
PFAML4A088 
ProdomL4A088 
UniProtKBM7UK72SubName: Full=Outer membrane pore protein N, non-specific;
InterProM7UK72 
PFAMM7UK72 
ProdomM7UK72 
UniProtKBE3PLA7SubName: Full=Outer membrane protein N (Porin) {ECO:0000313|EMBL:CBJ00954.1};
InterProE3PLA7 
PFAME3PLA7 
ProdomE3PLA7 
UniProtKBM8SX42SubName: Full=Outer membrane protein N;
InterProM8SX42 
PFAMM8SX42 
ProdomM8SX42 
UniProtKBE9WE92SubName: Full=Gram-negative porin;
InterProE9WE92 
PFAME9WE92 
ProdomE9WE92 
UniProtKBM8TFC5SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:EMV62342.1};
InterProM8TFC5 
PFAMM8TFC5 
ProdomM8TFC5 
UniProtKBF4SI52SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:EGI10967.1};
InterProF4SI52 
PFAMF4SI52 
ProdomF4SI52 
UniProtKBI2X4X0SubName: Full=Outer membrane protein N {ECO:0000313|EMBL:EII44040.1};
InterProI2X4X0 
PFAMI2X4X0 
ProdomI2X4X0