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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link P77774.1
Original Database ID ref NP_417007.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation yfgl_ecoli recname: full=lipoprotein
yfgl; flags: precursor
Sequence Length 392

Dataset Information:

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Model Information

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Target Region29-392
Protein Length392
Template PDB Code3q7nA
Template Region29-392
Sequence Identity100%
E-Value0
GA3411
MPQS2.08987
z-DOPE-0.92
TSVMod MethodMSALL
TSVMod RMSD1.501
TSVMod NO350.953
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3q7n
DBALI3q7nA 
JenaImageLibrary3q7n 
Target Sequence
UniProtKBC9QPR1RecName: Full=Outer membrane protein assembly factor BamB;Flags: Precursor;
InterProC9QPR1 
PFAMC9QPR1 
ProdomC9QPR1 
UniProtKBF9QVL3RecName: Full=Outer membrane protein assembly factor BamB;Flags: Precursor;
InterProF9QVL3 
PFAMF9QVL3 
ProdomF9QVL3 
UniProtKBG2F0R6RecName: Full=Outer membrane protein assembly factor BamB;Flags: Precursor;
InterProG2F0R6 
PFAMG2F0R6 
ProdomG2F0R6 
UniProtKBC4ZX87RecName: Full=Outer membrane protein assembly factor BamB;Flags: Precursor;
InterProC4ZX87 
PFAMC4ZX87 
ProdomC4ZX87 
UniProtKBH0QB84RecName: Full=Outer membrane protein assembly factor BamB;Flags: Precursor;
InterProH0QB84 
PFAMH0QB84 
ProdomH0QB84 
UniProtKBA0A0J9WZB1SubName: Full=Outer membrane assembly lipoprotein YfgL {ECO:0000313|EMBL:ACX38830.1};SubName: Full=Outer membrane protein assembly complex subunit {ECO:0000313|EMBL:BAJ44295.1};
InterProA0A0J9WZB1 
PFAMA0A0J9WZB1 
ProdomA0A0J9WZB1 
UniProtKBH4FGU6RecName: Full=Outer membrane protein assembly factor BamB;
InterProH4FGU6 
PFAMH4FGU6 
ProdomH4FGU6 
UniProtKBB1XAY7RecName: Full=Outer membrane protein assembly factor BamB;Flags: Precursor;
InterProB1XAY7 
PFAMB1XAY7 
ProdomB1XAY7 
UniProtKBI0ZTQ9RecName: Full=Outer membrane protein assembly factor BamB;Flags: Precursor;
InterProI0ZTQ9 
PFAMI0ZTQ9 
ProdomI0ZTQ9 
UniProtKBA0A094VUX3RecName: Full=Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923};Flags: Precursor;
InterProA0A094VUX3 
PFAMA0A094VUX3 
ProdomA0A094VUX3 
UniProtKBP77774RecName: Full=Outer membrane protein assembly factor BamB;Flags: Precursor;
InterProP77774 
PFAMP77774 
ProdomP77774 
UniProtKBA0A0G3HYL8RecName: Full=Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923};Flags: Precursor;
InterProA0A0G3HYL8 
PFAMA0A0G3HYL8 
ProdomA0A0G3HYL8 
UniProtKBM2NM16RecName: Full=Outer membrane protein assembly factor BamB;Flags: Precursor;
InterProM2NM16 
PFAMM2NM16 
ProdomM2NM16 
UniProtKBB1XAY7SubName: Full=Protein assembly complex, lipoprotein component;
InterProB1XAY7 
PFAMB1XAY7 
ProdomB1XAY7 
UniProtKBC4ZX87SubName: Full=Protein assembly complex, lipoprotein component;
InterProC4ZX87 
PFAMC4ZX87 
ProdomC4ZX87 
UniProtKBC9QPR1SubName: Full=Outer membrane assembly lipoprotein YfgL;SubName: Full=Outer membrane protein assembly complex subunit;Flags: Precursor;
InterProC9QPR1 
PFAMC9QPR1 
ProdomC9QPR1 
UniProtKBA0A6G6HFB4Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}Flags: Precursor
InterProA0A6G6HFB4 
PFAMA0A6G6HFB4 
ProdomA0A6G6HFB4 
UniProtKBA0A8F8DN27SubName: Full=Outer membrane protein assembly factor BamB {ECO:0000313|EMBL:QXZ38062.1}
InterProA0A8F8DN27 
PFAMA0A8F8DN27 
ProdomA0A8F8DN27 
UniProtKBF9QVL3SubName: Full=Outer membrane biogenesis protein BamB;
InterProF9QVL3 
PFAMF9QVL3 
ProdomF9QVL3 
UniProtKBA0A5Q3TCE9Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}Flags: Precursor
InterProA0A5Q3TCE9 
PFAMA0A5Q3TCE9 
ProdomA0A5Q3TCE9 
UniProtKBG2F0R6SubName: Full=Outer membrane biogenesis protein BamB;
InterProG2F0R6 
PFAMG2F0R6 
ProdomG2F0R6 
UniProtKBH0QB84SubName: Full=Protein assembly complex, lipoprotein component;
InterProH0QB84 
PFAMH0QB84 
ProdomH0QB84 
UniProtKBA0A507WQ69SubName: Full=Outer membrane protein assembly factor BamB {ECO:0000313|EMBL:TQD01971.1}
InterProA0A507WQ69 
PFAMA0A507WQ69 
ProdomA0A507WQ69 
UniProtKBH4FGU6SubName: Full=Outer membrane biogenesis protein BamB;
InterProH4FGU6 
PFAMH4FGU6 
ProdomH4FGU6 
UniProtKBI0ZTQ9SubName: Full=Protein assembly complex, lipoprotein component;
InterProI0ZTQ9 
PFAMI0ZTQ9 
ProdomI0ZTQ9 
UniProtKBA0A8F9HCX1SubName: Full=Outer membrane protein assembly factor BamB {ECO:0000313|EMBL:QYE26841.1}
InterProA0A8F9HCX1 
PFAMA0A8F9HCX1 
ProdomA0A8F9HCX1 
UniProtKBP77774RecName: Full=Outer membrane protein assembly factor BamB {ECO:0000255|HAMAP-Rule:MF_00923};Flags: Precursor;
InterProP77774 
PFAMP77774 
ProdomP77774 
UniProtKBP77774.1YFGL_ECOLI RecName: Full=Lipoprotein yfgL; Flags: Precursor
InterProP77774.1 
PFAMP77774.1 
ProdomP77774.1 
RefSeqNP_417007.1 lipoprotein required for OM biogenesis, in BamABCD complex [Escherichia coli str. K-12 substr. MG1655]
RefSeqAP_003098.1 protein assembly complex, lipoprotein component [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_002927473.1 protein assembly complex, lipoprotein component [Escherichia coli BW2952]
RefSeqYP_001731442.1 protein assembly complex, lipoprotein component [Escherichia coli str. K-12 substr. DH10B]
PDB6V05BOuter membrane protein assembly factor BamB
PDB5D0OBOuter Membrane Protein Assembly Factor Bamb
GenPept899727811membrane biogenesis protein
GenPept899732253membrane biogenesis protein
GenPept932860583Outer membrane protein YfgL, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and NlpB)
GenPept808731411membrane biogenesis protein
GenPept359332821protein assembly complex, lipoprotein component
GenPept899723456membrane biogenesis protein
GenPept89109318 protein assembly complex, lipoprotein component [Escherichia coli str. K-12 substr. W3110]
GenPept557272787outer membrane protein assembly complex subunit YfgL
GenPept664684811membrane biogenesis protein
GenPept682119987BamABCDE complex OM biogenesis lipoprotein
GenPept687673360BamB, subunit of Outer Membrane Protein Assembly Complex
GenPept687677645BamB, subunit of Outer Membrane Protein Assembly Complex
GenPept730583718lipoprotein required for OM biogenesis, in BamABCDE complex
GenPept731471447lipoprotein required for OM biogenesis, in BamABCDE complex
GenPept732683615membrane biogenesis protein
GenPept549813931lipoprotein required for OM biogenesis, in BamABCDE complex
GenPept3183438YFGL_ECOLI RecName: Full=Lipoprotein yfgL; Flags: Precursor
GenPept169889957protein assembly complex, lipoprotein component
GenPept170082122 protein assembly complex, lipoprotein component [Escherichia coli str. K-12 substr. DH10B]
GenPept1788859BamABCDE complex OM biogenesis lipoprotein
GenPept1805571protein assembly complex, lipoprotein component
GenPept238863292protein assembly complex, lipoprotein component
GenPept238901677 protein assembly complex, lipoprotein component [Escherichia coli BW2952]
GenPept260448408outer membrane assembly lipoprotein YfgL
GenPept315137136outer membrane protein assembly complex subunit
GenPept7466388G65027 hypothetical protein b2512 - Escherichia coli (strain K-12)
GenPept802135897lipoprotein required for OM biogenesis, in BamABCDE complex
GenPept808735840membrane biogenesis protein
GenPept817575760BamABCDE complex OM biogenesis lipoprotein
GenPept817579902BamABCDE complex OM biogenesis lipoprotein
GenPept817584041BamABCDE complex OM biogenesis lipoprotein
GenPept817588182BamABCDE complex OM biogenesis lipoprotein
GenPept817592322BamABCDE complex OM biogenesis lipoprotein
GenPept827619543lipoprotein required for OM biogenesis, in BamABCDE complex protein
GenPept827622685lipoprotein required for OM biogenesis, in BamABCDE complex protein
GenPept808723095membrane biogenesis protein
GenPept808718723membrane biogenesis protein
GenPept808701217membrane biogenesis protein
GenPept808705591membrane biogenesis protein
GenPept808709951membrane biogenesis protein
GenPept16130437 lipoprotein required for OM biogenesis, in BamABCD complex [Escherichia coli str. K-12 substr. MG1655]
GenPept808714313membrane biogenesis protein
GenBankACR65290.1 protein assembly complex, lipoprotein component [Escherichia coli BW2952]
GenBankACB03664.1 protein assembly complex, lipoprotein component [Escherichia coli str. K-12 substr. DH10B]
GenBankAAC75565.1 lipoprotein required for OM biogenesis, in BamABCD complex [Escherichia coli str. K-12 substr. MG1655]
GenBankACX38830.1 outer membrane assembly lipoprotein YfgL [Escherichia coli DH1]