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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P77779.1
Original Database ID UP P77779
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation ybfo_ecoli recname: full=putative
uncharacterized protein ybfo
Sequence Length 477

Dataset Information:

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Model Information

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Target Region222-289
Protein Length477
Template PDB Code3f8hA
Template Region50-121
Sequence Identity35%
E-Value0.82
GA3410.09
MPQS0.338858
z-DOPE1.05
TSVMod MethodMSALL
TSVMod RMSD12.601
TSVMod NO350.042
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3f8hcrystal structure of putative polyketide cyclase (yp_611791.1) from silicibacter sp. tm1040 at 2.00 a resolution
DBALI3f8hA 
JenaImageLibrary3f8h 
Target Sequence
UniProtKBA0A071D2B9SubName: Full=RHS repeat-associated core domain protein {ECO:0000313|EMBL:KDZ31407.1};
InterProA0A071D2B9 
PFAMA0A071D2B9 
ProdomA0A071D2B9 
UniProtKBC9R0R7SubName: Full=RHS protein;SubName: Full=Uncharacterized protein;Flags: Precursor;
InterProC9R0R7 
PFAMC9R0R7 
ProdomC9R0R7 
UniProtKBA0A071BUJ0SubName: Full=RHS repeat-associated core domain protein {ECO:0000313|EMBL:KDY86375.1};
InterProA0A071BUJ0 
PFAMA0A071BUJ0 
ProdomA0A071BUJ0 
UniProtKBF4M922SubName: Full=Core protein RhsC;
InterProF4M922 
PFAMF4M922 
ProdomF4M922 
UniProtKBG0FEY6SubName: Full=Uncharacterized protein ybfO {ECO:0000313|EMBL:AEJ55324.1};
InterProG0FEY6 
PFAMG0FEY6 
ProdomG0FEY6 
UniProtKBA0A0E0TW79SubName: Full=Core protein RhsC {ECO:0000313|EMBL:AEE55374.1};
InterProA0A0E0TW79 
PFAMA0A0E0TW79 
ProdomA0A0E0TW79 
UniProtKBH4UGT3SubName: Full=RHS family protein {ECO:0000313|EMBL:EHV61924.1};
InterProH4UGT3 
PFAMH4UGT3 
ProdomH4UGT3 
UniProtKBA0A0A0GT41SubName: Full=Protein RhsA {ECO:0000313|EMBL:KLX77696.1};SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KGM78044.1};
InterProA0A0A0GT41 
PFAMA0A0A0GT41 
ProdomA0A0A0GT41 
UniProtKBA0A070Y365SubName: Full=RHS repeat-associated core domain protein {ECO:0000313|EMBL:KDX85415.1};
InterProA0A070Y365 
PFAMA0A070Y365 
ProdomA0A070Y365 
UniProtKBA0A080GQK4SubName: Full=RHS repeat-associated core domain protein {ECO:0000313|EMBL:KEN92043.1};
InterProA0A080GQK4 
PFAMA0A080GQK4 
ProdomA0A080GQK4 
UniProtKBP77779RecName: Full=Putative uncharacterized protein YbfO;
InterProP77779 
PFAMP77779 
ProdomP77779 
UniProtKBA0A071AE57SubName: Full=RHS repeat-associated core domain protein {ECO:0000313|EMBL:KDY57903.1};
InterProA0A071AE57 
PFAMA0A071AE57 
ProdomA0A071AE57 
UniProtKBM9H905SubName: Full=RHS repeat-associated core domain protein {ECO:0000313|EMBL:EMX41234.1};
InterProM9H905 
PFAMM9H905 
ProdomM9H905 
UniProtKBM2MZR2SubName: Full=RhsC core protein;
InterProM2MZR2 
PFAMM2MZR2 
ProdomM2MZR2 
UniProtKBH9UPV6SubName: Full=Rhs family protein {ECO:0000313|EMBL:AFG39549.1};
InterProH9UPV6 
PFAMH9UPV6 
ProdomH9UPV6 
UniProtKBB1X6N4SubName: Full=Conserved protein, rhs-like protein;
InterProB1X6N4 
PFAMB1X6N4 
ProdomB1X6N4 
UniProtKBA0A829CML6SubName: Full=RHS repeat-associated core domain protein {ECO:0000313|EMBL:EMX41234.1}
InterProA0A829CML6 
PFAMA0A829CML6 
ProdomA0A829CML6 
UniProtKBB1X6N4SubName: Full=Conserved protein, rhs-like protein;
InterProB1X6N4 
PFAMB1X6N4 
ProdomB1X6N4 
UniProtKBC9R0R7SubName: Full=Putative uncharacterized protein ybfO;SubName: Full=RHS protein;Flags: Precursor;
InterProC9R0R7 
PFAMC9R0R7 
ProdomC9R0R7 
UniProtKBH9UPV6SubName: Full=Rhs family protein;
InterProH9UPV6 
PFAMH9UPV6 
ProdomH9UPV6 
UniProtKBH4UGT3SubName: Full=RHS family protein;
InterProH4UGT3 
PFAMH4UGT3 
ProdomH4UGT3 
UniProtKBG0FEY6SubName: Full=Uncharacterized protein ybfO;
InterProG0FEY6 
PFAMG0FEY6 
ProdomG0FEY6 
UniProtKBF4M922SubName: Full=Core protein RhsC;
InterProF4M922 
PFAMF4M922 
ProdomF4M922 
UniProtKBP77779RecName: Full=Putative uncharacterized protein YbfO;
InterProP77779 
PFAMP77779 
ProdomP77779 
UniProtKBP77779.1YBFO_ECOLI RecName: Full=Putative uncharacterized protein ybfO
InterProP77779.1 
PFAMP77779.1 
ProdomP77779.1 
RefSeqAP_001341.1 conserved hypothetical protein, rhs-like [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_001729690.1 protein, rhs-like protein [Escherichia coli str. K-12 substr. DH10B]
GenPept260450143RHS protein
GenPept89107561 conserved hypothetical protein, rhs-like [Escherichia coli str. K-12 substr. W3110]
GenPept7466118F64805 RhsA protein [imported] - Escherichia coli
GenPept732685360hypothetical protein EO53_14720
GenPept383102040Rhs family protein
GenPept332342040core protein RhsC
GenPept315135359conserved hypothetical protein, rhs-like
GenPept1786921conserved protein, rhs-like
GenPept170080370 protein, rhs-like protein [Escherichia coli str. K-12 substr. DH10B]
GenPept169888205conserved protein, rhs-like protein
GenPept1651310conserved hypothetical protein, rhs-like
GenPept16128678 (NC_000913) orf, hypothetical protein [Escherichia coli K12]
GenPept808699470hypothetical protein SH05_07350
GenPept808703841hypothetical protein SH02_07305
GenPept808708220hypothetical protein SH08_07355
GenPept899730447hypothetical protein ADZ28_03545
GenPept899726073hypothetical protein ADZ27_03545
GenPept899721717hypothetical protein ADS71_03545
GenPept13634057YBFO_ECOLI RecName: Full=Putative uncharacterized protein ybfO
GenPept808734098hypothetical protein SF31_07660
GenPept808729687hypothetical protein SH07_07350
GenPept808721366hypothetical protein SH04_07345
GenPept808716996hypothetical protein SH06_07660
GenPept808712586hypothetical protein SH03_07355
GenBankACB01912.1 conserved protein, rhs-like protein [Escherichia coli str. K-12 substr. DH10B]
GenBankACX40565.1 RHS protein [Escherichia coli DH1]