University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P77795.1
Original Database ID ref NP_415958.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation ydct_ecoli recname: full=uncharacterized
abc transporter atp-binding protein
ydc t
Sequence Length 337

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region4-332
Protein Length337
Template PDB Code1z47A
Template Region14-354
Sequence Identity40%
E-Value0
GA3411
MPQS1.44006
z-DOPE-0.61
TSVMod MethodMTALL
TSVMod RMSD5.586
TSVMod NO350.679
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1z47structure of the atpase subunit cysa of the putative sulfate atp-binding cassette (abc) transporter from alicyclobacillus acidocaldarius
DBALI1z47A 
CATH3.40.50.300 Domain: 1z47A01 P-loop containing nucleotide triphosphate hydrolases (99%)
JenaImageLibrary1z47 
Target Sequence
UniProtKBB7LYS7SubName: Full=Putative spermidine/putrescine transporter subunit ATP-binding component of ABC superfamily tranporter;
InterProB7LYS7 
PFAMB7LYS7 
ProdomB7LYS7 
UniProtKBA0A070V070SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDX47164.1};
InterProA0A070V070 
PFAMA0A070V070 
ProdomA0A070V070 
UniProtKBA0A070Y2G6SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDX85361.1};
InterProA0A070Y2G6 
PFAMA0A070Y2G6 
ProdomA0A070Y2G6 
UniProtKBA0A071CR68SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDZ17170.1};
InterProA0A071CR68 
PFAMA0A071CR68 
ProdomA0A071CR68 
UniProtKBA0A071D227SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDZ35399.1};
InterProA0A071D227 
PFAMA0A071D227 
ProdomA0A071D227 
UniProtKBA0A074IG09SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KEN99489.1};
InterProA0A074IG09 
PFAMA0A074IG09 
ProdomA0A074IG09 
UniProtKBA0A074ILE4SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KEO12711.1};
InterProA0A074ILE4 
PFAMA0A074ILE4 
ProdomA0A074ILE4 
UniProtKBA0A0A8UC91SubName: Full=Putative spermidine/putrescine transporter subunit ATP-binding component of ABC superfamily tranporter {ECO:0000313|EMBL:CEK04680.1};
InterProA0A0A8UC91 
PFAMA0A0A8UC91 
ProdomA0A0A8UC91 
UniProtKBA0A0E1LX68SubName: Full=Putative spermidine/putrescine transporter subunit {ECO:0000313|EMBL:AJF56277.1};
InterProA0A0E1LX68 
PFAMA0A0E1LX68 
ProdomA0A0E1LX68 
UniProtKBA0A0E2TH25SubName: Full=Polyamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYV04087.1};
InterProA0A0E2TH25 
PFAMA0A0E2TH25 
ProdomA0A0E2TH25 
UniProtKBA0A0E2TVL5SubName: Full=Polyamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZE17908.1};
InterProA0A0E2TVL5 
PFAMA0A0E2TVL5 
ProdomA0A0E2TVL5 
UniProtKBA0A069XE06SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDU28280.1};
InterProA0A069XE06 
PFAMA0A069XE06 
ProdomA0A069XE06 
UniProtKBA0A028E142SubName: Full=Polyamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZE53554.1};
InterProA0A028E142 
PFAMA0A028E142 
ProdomA0A028E142 
UniProtKBH5E145SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:EHW71188.1};
InterProH5E145 
PFAMH5E145 
ProdomH5E145 
UniProtKBH9USP9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFG40542.1};
InterProH9USP9 
PFAMH9USP9 
ProdomH9USP9 
UniProtKBC4ZVI0SubName: Full=Predicted spermidine/putrescine transporter subunit;
InterProC4ZVI0 
PFAMC4ZVI0 
ProdomC4ZVI0 
UniProtKBI2S8H1SubName: Full=TOBE domain protein;
InterProI2S8H1 
PFAMI2S8H1 
ProdomI2S8H1 
UniProtKBI2SN79SubName: Full=TOBE domain protein {ECO:0000313|EMBL:EIH22250.1};
InterProI2SN79 
PFAMI2SN79 
ProdomI2SN79 
UniProtKBC6UH67SubName: Full=Predicted spermidine/putrescine transporter subunit;
InterProC6UH67 
PFAMC6UH67 
ProdomC6UH67 
UniProtKBC8TRG5SubName: Full=Predicted spermidine/putrescine transporter subunit {ECO:0000313|EMBL:BAI25315.1};
InterProC8TRG5 
PFAMC8TRG5 
ProdomC8TRG5 
UniProtKBI2U707SubName: Full=TOBE domain protein;
InterProI2U707 
PFAMI2U707 
ProdomI2U707 
UniProtKBC9QW24SubName: Full=ABC transporter related protein;SubName: Full=Putative spermidine/putrescine transporter subunit;
InterProC9QW24 
PFAMC9QW24 
ProdomC9QW24 
UniProtKBI2TSW1SubName: Full=TOBE domain protein;
InterProI2TSW1 
PFAMI2TSW1 
ProdomI2TSW1 
UniProtKBD7ZRE1SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFK26535.1};
InterProD7ZRE1 
PFAMD7ZRE1 
ProdomD7ZRE1 
UniProtKBA0A0H4RXG6SubName: Full=ABC transporter ATP-binding protein {ECO:0000313|EMBL:AKP84151.1};
InterProA0A0H4RXG6 
PFAMA0A0H4RXG6 
ProdomA0A0H4RXG6 
UniProtKBD8E9A9SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFK45265.1};
InterProD8E9A9 
PFAMD8E9A9 
ProdomD8E9A9 
UniProtKBH5D238SubName: Full=ABC transporter family protein;
InterProH5D238 
PFAMH5D238 
ProdomH5D238 
UniProtKBH5ATF6SubName: Full=ABC transporter family protein;
InterProH5ATF6 
PFAMH5ATF6 
ProdomH5ATF6 
UniProtKBG2F6U5SubName: Full=Putative spermidine/putrescine transporter subunit;
InterProG2F6U5 
PFAMG2F6U5 
ProdomG2F6U5 
UniProtKBD8B7Q1SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFJ64884.1};
InterProD8B7Q1 
PFAMD8B7Q1 
ProdomD8B7Q1 
UniProtKBH5FW01SubName: Full=ABC transporter family protein;
InterProH5FW01 
PFAMH5FW01 
ProdomH5FW01 
UniProtKBH5EYH6SubName: Full=ABC transporter family protein;
InterProH5EYH6 
PFAMH5EYH6 
ProdomH5EYH6 
UniProtKBH5LL52SubName: Full=ABC transporter family protein;
InterProH5LL52 
PFAMH5LL52 
ProdomH5LL52 
UniProtKBH5I3A9SubName: Full=ABC transporter family protein;
InterProH5I3A9 
PFAMH5I3A9 
ProdomH5I3A9 
UniProtKBD8ALK9SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFK15968.1};
InterProD8ALK9 
PFAMD8ALK9 
ProdomD8ALK9 
UniProtKBI2P7U6SubName: Full=Uncharacterized protein;
InterProI2P7U6 
PFAMI2P7U6 
ProdomI2P7U6 
UniProtKBH5B930SubName: Full=ABC transporter family protein;
InterProH5B930 
PFAMH5B930 
ProdomH5B930 
UniProtKBH5BPI3SubName: Full=ABC transporter family protein;
InterProH5BPI3 
PFAMH5BPI3 
ProdomH5BPI3 
UniProtKBH0QCP2SubName: Full=Predicted spermidine/putrescine transporter subunit;
InterProH0QCP2 
PFAMH0QCP2 
ProdomH0QCP2 
UniProtKBE8YA08SubName: Full=ABC transporter related protein {ECO:0000313|EMBL:ADX50983.1};
InterProE8YA08 
PFAME8YA08 
ProdomE8YA08 
UniProtKBE9WSN7SubName: Full=ABC transporter;
InterProE9WSN7 
PFAME9WSN7 
ProdomE9WSN7 
UniProtKBE1HLR3SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFK91142.1};
InterProE1HLR3 
PFAME1HLR3 
ProdomE1HLR3 
UniProtKBF8XI26SubName: Full=Polyamine ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGU95607.1};
InterProF8XI26 
PFAMF8XI26 
ProdomF8XI26 
UniProtKBF4VDX1SubName: Full=Putative ATP-binding component of a transport system {ECO:0000313|EMBL:EGI46451.1};
InterProF4VDX1 
PFAMF4VDX1 
ProdomF4VDX1 
UniProtKBG2BN89SubName: Full=ABC transporter family protein;EC=3.6.3.31;
InterProG2BN89 
PFAMG2BN89 
ProdomG2BN89 
UniProtKBF4UMD0SubName: Full=Putative ATP-binding component of a transport system;
InterProF4UMD0 
PFAMF4UMD0 
ProdomF4UMD0 
UniProtKBE0IVM2SubName: Full=Predicted spermidine/putrescine transporter subunit {ECO:0000313|EMBL:ADT75046.1};SubName: Full=Putative spermidine/putrescine transporter subunit {ECO:0000313|EMBL:AFH11199.1};
InterProE0IVM2 
PFAME0IVM2 
ProdomE0IVM2 
UniProtKBH4VVQ4SubName: Full=ABC transporter family protein;
InterProH4VVQ4 
PFAMH4VVQ4 
ProdomH4VVQ4 
UniProtKBH4FHQ3SubName: Full=Spermidine/putrescine transporter subunit;
InterProH4FHQ3 
PFAMH4FHQ3 
ProdomH4FHQ3 
UniProtKBB3I224SubName: Full=ABC transporter, ATP-binding protein;
InterProB3I224 
PFAMB3I224 
ProdomB3I224 
UniProtKBI2HZG9SubName: Full=ABC transporter;
InterProI2HZG9 
PFAMI2HZG9 
ProdomI2HZG9 
UniProtKBA0A025GCY2SubName: Full=Polyamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYV62697.1};
InterProA0A025GCY2 
PFAMA0A025GCY2 
ProdomA0A025GCY2 
UniProtKBC8U8B7SubName: Full=Predicted spermidine/putrescine transporter subunit {ECO:0000313|EMBL:BAI30395.1};
InterProC8U8B7 
PFAMC8U8B7 
ProdomC8U8B7 
UniProtKBA0A027ZMW7SubName: Full=Polyamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZD99897.1};
InterProA0A027ZMW7 
PFAMA0A027ZMW7 
ProdomA0A027ZMW7 
UniProtKBA0A071ARL1SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDY57315.1};
InterProA0A071ARL1 
PFAMA0A071ARL1 
ProdomA0A071ARL1 
UniProtKBA0A079GFQ4SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDY89703.1};
InterProA0A079GFQ4 
PFAMA0A079GFQ4 
ProdomA0A079GFQ4 
UniProtKBA0A0E3H2Y6SubName: Full=Putative ABC transporter ATP-binding protein YdcT {ECO:0000313|EMBL:AKA90481.1};
InterProA0A0E3H2Y6 
PFAMA0A0E3H2Y6 
ProdomA0A0E3H2Y6 
UniProtKBF4SIM5SubName: Full=Putative ATP-binding component of a transport system {ECO:0000313|EMBL:EGI11036.1};
InterProF4SIM5 
PFAMF4SIM5 
ProdomF4SIM5 
UniProtKBG2CLW3SubName: Full=ABC transporter family protein;EC=3.6.3.31;
InterProG2CLW3 
PFAMG2CLW3 
ProdomG2CLW3 
UniProtKBH5ACU3SubName: Full=ABC transporter family protein;
InterProH5ACU3 
PFAMH5ACU3 
ProdomH5ACU3 
UniProtKBH5DIJ4SubName: Full=ABC transporter family protein;
InterProH5DIJ4 
PFAMH5DIJ4 
ProdomH5DIJ4 
UniProtKBH5HN69SubName: Full=ABC transporter family protein;
InterProH5HN69 
PFAMH5HN69 
ProdomH5HN69 
UniProtKBI2TAQ3SubName: Full=TOBE domain protein;
InterProI2TAQ3 
PFAMI2TAQ3 
ProdomI2TAQ3 
UniProtKBB3IEQ9SubName: Full=ABC transporter, ATP-binding protein;
InterProB3IEQ9 
PFAMB3IEQ9 
ProdomB3IEQ9 
UniProtKBH5H6N2SubName: Full=ABC transporter family protein;
InterProH5H6N2 
PFAMH5H6N2 
ProdomH5H6N2 
UniProtKBA0A026GUY5SubName: Full=Polyamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYY73349.1};
InterProA0A026GUY5 
PFAMA0A026GUY5 
ProdomA0A026GUY5 
UniProtKBH5GBD9SubName: Full=ABC transporter family protein;
InterProH5GBD9 
PFAMH5GBD9 
ProdomH5GBD9 
UniProtKBA0A026V2L1SubName: Full=Polyamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZA36284.1};
InterProA0A026V2L1 
PFAMA0A026V2L1 
ProdomA0A026V2L1 
UniProtKBE7UMJ1SubName: Full=Putrescine transport ATP-binding protein PotA;
InterProE7UMJ1 
PFAME7UMJ1 
ProdomE7UMJ1 
UniProtKBH5FDQ1SubName: Full=ABC transporter family protein;
InterProH5FDQ1 
PFAMH5FDQ1 
ProdomH5FDQ1 
UniProtKBC5W3M9SubName: Full=ABC transporter related {ECO:0000313|EMBL:ACT29230.1};
InterProC5W3M9 
PFAMC5W3M9 
ProdomC5W3M9 
UniProtKBA0A027TJM9SubName: Full=Polyamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZD25561.1};
InterProA0A027TJM9 
PFAMA0A027TJM9 
ProdomA0A027TJM9 
UniProtKBA0A079FJJ5SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDY58017.1};
InterProA0A079FJJ5 
PFAMA0A079FJJ5 
ProdomA0A079FJJ5 
UniProtKBE9XYU1SubName: Full=ABC transporter;
InterProE9XYU1 
PFAME9XYU1 
ProdomE9XYU1 
UniProtKBH4ZD36SubName: Full=ABC transporter family protein;
InterProH4ZD36 
PFAMH4ZD36 
ProdomH4ZD36 
UniProtKBH5P3Z9SubName: Full=ABC transporter family protein;
InterProH5P3Z9 
PFAMH5P3Z9 
ProdomH5P3Z9 
UniProtKBI2R3J0SubName: Full=Uncharacterized protein;
InterProI2R3J0 
PFAMI2R3J0 
ProdomI2R3J0 
UniProtKBE9X423SubName: Full=ABC transporter;
InterProE9X423 
PFAME9X423 
ProdomE9X423 
UniProtKBF9R2T8SubName: Full=Putative spermidine/putrescine transporter subunit;
InterProF9R2T8 
PFAMF9R2T8 
ProdomF9R2T8 
UniProtKBG0FFB4SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:AEJ56488.1};
InterProG0FFB4 
PFAMG0FFB4 
ProdomG0FFB4 
UniProtKBH4UIT0SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:EHV59480.1};
InterProH4UIT0 
PFAMH4UIT0 
ProdomH4UIT0 
UniProtKBH4W9P1SubName: Full=ABC transporter family protein;
InterProH4W9P1 
PFAMH4W9P1 
ProdomH4W9P1 
UniProtKBH5C5A9SubName: Full=ABC transporter family protein;
InterProH5C5A9 
PFAMH5C5A9 
ProdomH5C5A9 
UniProtKBH5CKT4SubName: Full=ABC transporter family protein;
InterProH5CKT4 
PFAMH5CKT4 
ProdomH5CKT4 
UniProtKBD8EJX3SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFK52083.1};
InterProD8EJX3 
PFAMD8EJX3 
ProdomD8EJX3 
UniProtKBH5GRG0SubName: Full=ABC transporter family protein;
InterProH5GRG0 
PFAMH5GRG0 
ProdomH5GRG0 
UniProtKBH5N957SubName: Full=ABC transporter family protein;
InterProH5N957 
PFAMH5N957 
ProdomH5N957 
UniProtKBD8BT97SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFI90123.1};
InterProD8BT97 
PFAMD8BT97 
ProdomD8BT97 
UniProtKBA0A0G3HXR6SubName: Full=Putative spermidine/putrescine transporter subunit protein {ECO:0000313|EMBL:AKK17570.1};
InterProA0A0G3HXR6 
PFAMA0A0G3HXR6 
ProdomA0A0G3HXR6 
UniProtKBA0A0E1ZZU6SubName: Full=ABC transporter {ECO:0000313|EMBL:EIL30047.1};
InterProA0A0E1ZZU6 
PFAMA0A0E1ZZU6 
ProdomA0A0E1ZZU6 
UniProtKBH5EHV2SubName: Full=ABC transporter family protein;
InterProH5EHV2 
PFAMH5EHV2 
ProdomH5EHV2 
UniProtKBC6EES2SubName: Full=ABC transporter related {ECO:0000313|EMBL:ACT29230.1};
InterProC6EES2 
PFAMC6EES2 
ProdomC6EES2 
UniProtKBI2UG25SubName: Full=TOBE domain protein {ECO:0000313|EMBL:EIH77151.1};
InterProI2UG25 
PFAMI2UG25 
ProdomI2UG25 
UniProtKBD6HWM6SubName: Full=Spermidine Putrescine transport ATP-binding protein potA {ECO:0000313|EMBL:EFE64063.2};
InterProD6HWM6 
PFAMD6HWM6 
ProdomD6HWM6 
UniProtKBA0A028C213SubName: Full=Polyamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZE29359.1};
InterProA0A028C213 
PFAMA0A028C213 
ProdomA0A028C213 
UniProtKBA0A069YY90SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDU49927.1};
InterProA0A069YY90 
PFAMA0A069YY90 
ProdomA0A069YY90 
UniProtKBA0A071BS74SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDY84666.1};
InterProA0A071BS74 
PFAMA0A071BS74 
ProdomA0A071BS74 
UniProtKBA0A073T8F1SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KEL21728.1};
InterProA0A073T8F1 
PFAMA0A073T8F1 
ProdomA0A073T8F1 
UniProtKBA0A080GNG1SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KEN91077.1};
InterProA0A080GNG1 
PFAMA0A080GNG1 
ProdomA0A080GNG1 
UniProtKBB1XDF2SubName: Full=Predicted spermidine/putrescine transporter subunit; ATP-binding component of ABC superfamily;
InterProB1XDF2 
PFAMB1XDF2 
ProdomB1XDF2