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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q2EEP9.1
Original Database ID Custom ID
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation yaff_ecoli recname: full=putative
uncharacterized protein yaff
Sequence Length 62

Dataset Information:

The newest dataset for this sequence was created on 2019-07-26. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region2-61
Protein Length62
Template PDB Code6hmqA
Template Region36-95
Sequence Identity35%
E-Value0.41
GA3410.28
MPQS1.02224
z-DOPE1.3
TSVMod MethodMSALL
TSVMod RMSD10.32
TSVMod NO350.129
DatasetMW-update_D8642
ModPipe VersionSVN.r1623
Model Date2019-07-26

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB6hmq
DBALI6hmqA 
JenaImageLibrary6hmq 
Target Sequence
UniProtKBQ47678RecName: Full=Putative uncharacterized protein YafF;
InterProQ47678 
PFAMQ47678 
ProdomQ47678 
UniProtKBE9WP89SubName: Full=Transposase;
InterProE9WP89 
PFAME9WP89 
ProdomE9WP89 
UniProtKBG2B563SubName: Full=H repeat-associated protein yhhI domain protein;
InterProG2B563 
PFAMG2B563 
ProdomG2B563 
UniProtKBG2F7B2SubName: Full=Putative transposase;
InterProG2F7B2 
PFAMG2F7B2 
ProdomG2F7B2 
UniProtKBE6NWI6SubName: Full=Transposase IS4 family protein;
InterProE6NWI6 
PFAME6NWI6 
ProdomE6NWI6 
UniProtKBH0Q6K1SubName: Full=Conserved protein;
InterProH0Q6K1 
PFAMH0Q6K1 
ProdomH0Q6K1 
UniProtKBM2NB00SubName: Full=Transposase;
InterProM2NB00 
PFAMM2NB00 
ProdomM2NB00 
UniProtKBN2VDP7SubName: Full=H repeat-associated yhhI domain protein;
InterProN2VDP7 
PFAMN2VDP7 
ProdomN2VDP7 
UniProtKBN2WRI1SubName: Full=H repeat-associated yhhI domain protein;
InterProN2WRI1 
PFAMN2WRI1 
ProdomN2WRI1 
UniProtKBQ2EEP9RecName: Full=Putative uncharacterized protein YafF;
InterProQ2EEP9 
PFAMQ2EEP9 
ProdomQ2EEP9 
UniProtKBE6NWI6SubName: Full=Transposase IS4 family protein;
InterProE6NWI6 
PFAME6NWI6 
ProdomE6NWI6 
UniProtKBE9WP89SubName: Full=Transposase;
InterProE9WP89 
PFAME9WP89 
ProdomE9WP89 
UniProtKBQ47678Hypothetical protein yafF
InterProQ47678 
PFAMQ47678 
ProdomQ47678 
UniProtKBG2B563SubName: Full=H repeat-associated protein yhhI domain protein;
InterProG2B563 
PFAMG2B563 
ProdomG2B563 
UniProtKBG2F7B2SubName: Full=Putative transposase;
InterProG2F7B2 
PFAMG2F7B2 
ProdomG2F7B2 
UniProtKBQ2EEP9Conserved protein
InterProQ2EEP9 
PFAMQ2EEP9 
ProdomQ2EEP9 
UniProtKBH0Q6K1SubName: Full=Conserved protein;
InterProH0Q6K1 
PFAMH0Q6K1 
ProdomH0Q6K1 
UniProtKBA0A4D1JXY5SubName: Full=Transposase {ECO:0000313|EMBL:GCR94030.1}
InterProA0A4D1JXY5 
PFAMA0A4D1JXY5 
ProdomA0A4D1JXY5 
UniProtKBQ47678RecName: Full=Putative uncharacterized protein YafF;
InterProQ47678 
PFAMQ47678 
ProdomQ47678 
UniProtKBQ2EEP9.1YAFF_ECOLI RecName: Full=Putative uncharacterized protein yafF
InterProQ2EEP9.1 
PFAMQ2EEP9.1 
ProdomQ2EEP9.1 
UniProtKBQ2EEP9RecName: Full=Putative uncharacterized protein YafF;
InterProQ2EEP9 
PFAMQ2EEP9 
ProdomQ2EEP9 
RefSeqAP_000873.1 hypothetical protein [Escherichia coli str. K-12 substr. W3110]
GenPept732685820hypothetical protein EO53_17225
GenPept664682656hypothetical protein HQ24_01075
GenPept4902954conserved hypothetical protein
GenPept359331071conserved protein
GenPept315134903transposase IS4 family protein
GenPept808699009hypothetical protein SH05_04855
GenPept808703380hypothetical protein SH02_04810
GenPept89107093 hypothetical protein [Escherichia coli str. K-12 substr. W3110]
GenPept87081701conserved protein
GenPept808733634hypothetical protein SF31_05155
GenPept808729222hypothetical protein SH07_04840
GenPept808720901hypothetical protein SH04_04835
GenPept808716532hypothetical protein SH06_05155
GenPept808712119hypothetical protein SH03_04845
GenPept808707760hypothetical protein SH08_04855
GenPept115502906YAFF_ECOLI RecName: Full=Putative uncharacterized protein YafF