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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link Q46833
Original Database ID UP Q46833
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation recname: full=putative type ii
secretion system l-type protein
yghe;altname: ful l=putative general
secretion pathway l-type protein
yghe;
Sequence Length 286

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region202-286
Protein Length286
Template PDB Code2w7vA
Template Region322-404
Sequence Identity29%
E-Value2.3e-10
GA3411
MPQS0.765503
z-DOPE-1.15
TSVMod MethodMSALL
TSVMod RMSD2.537
TSVMod NO350.876
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2w7vperiplasmic domain of epsl from vibrio parahaemolyticus
DBALI2w7vA 
JenaImageLibrary2w7v 
Target Sequence
UniProtKBF9R417SubName: Full=General secretion pathway protein L;
InterProF9R417 
PFAMF9R417 
ProdomF9R417 
UniProtKBC6EIE1SubName: Full=General secretion pathway protein L {ECO:0000313|EMBL:ACT27838.1};
InterProC6EIE1 
PFAMC6EIE1 
ProdomC6EIE1 
UniProtKBG2F371SubName: Full=General secretion pathway protein L;
InterProG2F371 
PFAMG2F371 
ProdomG2F371 
UniProtKBM2NF43SubName: Full=GspL-like protein;
InterProM2NF43 
PFAMM2NF43 
ProdomM2NF43 
UniProtKBQ46833RecName: Full=Putative type II secretion system L-type protein YghE;AltName: Full=Putative general secretion pathway L-type protein YghE;
InterProQ46833 
PFAMQ46833 
ProdomQ46833 
UniProtKBA0A094Y2M0SubName: Full=General secretion pathway protein L {ECO:0000313|EMBL:CEE07463.1};SubName: Full=Type II secretion system L-type protein YghE {ECO:0000313|EMBL:AKO58895.1};
InterProA0A094Y2M0 
PFAMA0A094Y2M0 
ProdomA0A094Y2M0 
UniProtKBG2F371SubName: Full=General secretion pathway protein L;
InterProG2F371 
PFAMG2F371 
ProdomG2F371 
UniProtKBA0A140N5F1SubName: Full=General secretion pathway protein L {ECO:0000313|EMBL:ACT27838.1}
InterProA0A140N5F1 
PFAMA0A140N5F1 
ProdomA0A140N5F1 
UniProtKBF9R417SubName: Full=General secretion pathway protein L;
InterProF9R417 
PFAMF9R417 
ProdomF9R417 
UniProtKBC6EIE1SubName: Full=General secretion pathway protein L;
InterProC6EIE1 
PFAMC6EIE1 
ProdomC6EIE1 
UniProtKBA0A7H2C768SubName: Full=Putative type II secretion system L-type protein YghE {ECO:0000313|EMBL:QNV50515.1}
InterProA0A7H2C768 
PFAMA0A7H2C768 
ProdomA0A7H2C768 
UniProtKBQ46833RecName: Full=Putative type II secretion system L-type protein YghE;AltName: Full=Putative general secretion pathway L-type protein YghE;
InterProQ46833 
PFAMQ46833 
ProdomQ46833 
UniProtKBQ46833.1YGHE_ECOLI RecName: Full=Putative general secretion pathway protein L-type yghE
InterProQ46833.1 
PFAMQ46833.1 
ProdomQ46833.1 
RefSeqYP_010051197.1putative type II secretion system L-type protein YghE
RefSeqYP_003035023.1 general secretion pathway protein L [Escherichia coli BL21-Gold(DE3)pLysS AG]
GenPept899732692type II secretion system L-type protein YghE
GenPept899729710type II secretion system L-type protein YghE
GenPept899725362type II secretion system L-type protein YghE
GenPept882498ORF_f286
GenPept1789340predicted secretion pathway protein, L-type protein (pseudogene)
GenPept253323236general secretion pathway protein L
GenPept253772192 general secretion pathway protein L [Escherichia coli BL21-Gold(DE3)pLysS AG]
GenPept3025195YGHE_ECOLI RecName: Full=Putative general secretion pathway protein L-type yghE
GenPept664685330type II secretion system L-type protein YghE
GenPept732686887type II secretion system L-type protein YghE
GenPept7466486G65082 hypothetical protein b2969 - Escherichia coli (strain K-12)
GenPept808702488type II secretion system L-type protein YghE
GenPept808706858type II secretion system L-type protein YghE
GenPept808711213type II secretion system L-type protein YghE
GenPept808715579type II secretion system L-type protein YghE
GenPept808720001type II secretion system L-type protein YghE
GenPept808724362type II secretion system L-type protein YghE
GenPept808732683type II secretion system L-type protein YghE
GenPept808737128type II secretion system L-type protein YghE
GenPept16130869 (NC_000913) putative general secretion pathway for protein export (GSP) [Escherichia coli K12]
GenBankACT27838.1 general secretion pathway protein L [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
GenBankAAA69136.1 ORF_f286 [Escherichia coli str. K-12 substr. MG1655]