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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q46841.2
Original Database ID ref YP_026192.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation yghq_ecoli recname: full=inner
membrane protein yghq
Sequence Length 355

Dataset Information:

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Model Information

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Target Region99-202
Protein Length355
Template PDB Code1r1a3
Template Region83-198
Sequence Identity32%
E-Value0.6
GA3410.02
MPQS0.183558
z-DOPE2.75
TSVMod MethodMSALL
TSVMod RMSD17.641
TSVMod NO350.07
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1r1acrystal structure of human rhinovirus serotype 1a (hrv1a)
DBALI1r1a3 
CATH2.60.120.20 Domain: 1r1a300 Jelly Rolls (49%)
JenaImageLibrary1r1a 
Target Sequence
UniProtKBF9R337SubName: Full=Putative uncharacterized protein;
InterProF9R337 
PFAMF9R337 
ProdomF9R337 
UniProtKBG2F745SubName: Full=Putative uncharacterized protein;
InterProG2F745 
PFAMG2F745 
ProdomG2F745 
UniProtKBI0ZVM4SubName: Full=Polysaccharide biosynthesis protein;
InterProI0ZVM4 
PFAMI0ZVM4 
ProdomI0ZVM4 
UniProtKBC6EI09SubName: Full=Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ACT27824.1};
InterProC6EI09 
PFAMC6EI09 
ProdomC6EI09 
UniProtKBC5A0P8SubName: Full=Predicted inner membrane protein;
InterProC5A0P8 
PFAMC5A0P8 
ProdomC5A0P8 
UniProtKBQ2M9L2RecName: Full=Inner membrane protein YghQ;
InterProQ2M9L2 
PFAMQ2M9L2 
ProdomQ2M9L2 
UniProtKBQ46841RecName: Full=Inner membrane protein YghQ;
InterProQ46841 
PFAMQ46841 
ProdomQ46841 
UniProtKBB1XFD9SubName: Full=Predicted inner membrane protein;
InterProB1XFD9 
PFAMB1XFD9 
ProdomB1XFD9 
UniProtKBA0A0G3HPA9SubName: Full=Putative inner membrane protein {ECO:0000313|EMBL:AKK15159.1};
InterProA0A0G3HPA9 
PFAMA0A0G3HPA9 
ProdomA0A0G3HPA9 
UniProtKBA0A090JNR0SubName: Full=Inner membrane protein yghQ;SubName: Full=Membrane protein {ECO:0000313|EMBL:AKO58461.1};
InterProA0A090JNR0 
PFAMA0A090JNR0 
ProdomA0A090JNR0 
UniProtKBC5A0P8SubName: Full=Predicted inner membrane protein;
InterProC5A0P8 
PFAMC5A0P8 
ProdomC5A0P8 
UniProtKBC4VXY3SubName: Full=Polysaccharide biosynthesis protein;
InterProC4VXY3 
PFAMC4VXY3 
ProdomC4VXY3 
UniProtKBC6EI09SubName: Full=Polysaccharide biosynthesis protein;
InterProC6EI09 
PFAMC6EI09 
ProdomC6EI09 
UniProtKBA0A385FVH3SubName: Full=Inner membrane protein YghQ {ECO:0000313|EMBL:AXV45581.1}
InterProA0A385FVH3 
PFAMA0A385FVH3 
ProdomA0A385FVH3 
UniProtKBF9R337SubName: Full=Putative uncharacterized protein;
InterProF9R337 
PFAMF9R337 
ProdomF9R337 
UniProtKBG2F745SubName: Full=Putative uncharacterized protein;
InterProG2F745 
PFAMG2F745 
ProdomG2F745 
UniProtKBI0ZVM4SubName: Full=Polysaccharide biosynthesis protein;
InterProI0ZVM4 
PFAMI0ZVM4 
ProdomI0ZVM4 
UniProtKBQ2M9L2Predicted inner membrane protein
InterProQ2M9L2 
PFAMQ2M9L2 
ProdomQ2M9L2 
UniProtKBA0A2X6I652SubName: Full=Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EAC1717045.1}SubName: Full=Polysaccharide biosynthesis protein {ECO:0000313|EMBL:SVF26730.1}
InterProA0A2X6I652 
PFAMA0A2X6I652 
ProdomA0A2X6I652 
UniProtKBA0A140N657SubName: Full=Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ACT27824.1}
InterProA0A140N657 
PFAMA0A140N657 
ProdomA0A140N657 
UniProtKBB1XFD9SubName: Full=Predicted inner membrane protein;
InterProB1XFD9 
PFAMB1XFD9 
ProdomB1XFD9 
UniProtKBQ2M9L2RecName: Full=Inner membrane protein YghQ;
InterProQ2M9L2 
PFAMQ2M9L2 
ProdomQ2M9L2 
UniProtKBQ46841RecName: Full=Inner membrane protein YghQ;
InterProQ46841 
PFAMQ46841 
ProdomQ46841 
UniProtKBQ46841.2YGHQ_ECOLI RecName: Full=Inner membrane protein yghQ
InterProQ46841.2 
PFAMQ46841.2 
ProdomQ46841.2 
RefSeqAP_003538.1 predicted inner membrane protein [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_026192.1 predicted inner membrane protein [Escherichia coli str. K-12 substr. MG1655]
RefSeqYP_001731851.1 inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
RefSeqYP_002927897.1 putative inner membrane protein [Escherichia coli BW2952]
RefSeqYP_003035009.1 polysaccharide biosynthesis protein [Escherichia coli BL21-Gold(DE3)pLysS AG]
GenPept49176296 predicted inner membrane protein [Escherichia coli str. K-12 substr. MG1655]
GenPept932861064Inner membrane protein YghQ, probably involved in polysaccharide biosynthesis, partial
GenPept89109758 predicted inner membrane protein [Escherichia coli str. K-12 substr. W3110]
GenPept85675791predicted inner membrane protein
GenPept827623051putative inner membrane protein
GenPept732683185membrane protein
GenPept731471897putative inner membrane protein
GenPept730584168putative inner membrane protein
GenPept687678092predicted inner membrane protein
GenPept687673803predicted inner membrane protein
GenPept682120413putative inner membrane polysaccharide flippase
GenPept664685344membrane protein
GenPept557273794putative inner membrane protein
GenPept549814354putative inner membrane protein
GenPept48994915putative inner membrane polysaccharide flippase
GenPept253772178 polysaccharide biosynthesis protein [Escherichia coli BL21-Gold(DE3)pLysS AG]
GenPept253323222polysaccharide biosynthesis protein
GenPept238902101 putative inner membrane protein [Escherichia coli BW2952]
GenPept238862519predicted inner membrane protein
GenPept170082531 inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
GenPept169890366predicted inner membrane protein
GenPept808701645membrane protein
GenPept808706019membrane protein
GenPept827619176putative inner membrane protein
GenPept817592747putative inner membrane polysaccharide flippase
GenPept817588607putative inner membrane polysaccharide flippase
GenPept817584466putative inner membrane polysaccharide flippase
GenPept817580327putative inner membrane polysaccharide flippase
GenPept817576185putative inner membrane polysaccharide flippase
GenPept808736270membrane protein
GenPept14917096YGHQ_ECOLI RecName: Full=Inner membrane protein yghQ
GenPept808731839membrane protein
GenPept808723522membrane protein
GenPept808719152membrane protein
GenPept808714741membrane protein
GenPept808710376membrane protein
GenBankACB04073.1 predicted inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
GenBankACR64517.1 predicted inner membrane protein [Escherichia coli BW2952]
GenBankACT27824.1 polysaccharide biosynthesis protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
GenBankAAT48159.1 predicted inner membrane protein [Escherichia coli str. K-12 substr. MG1655]