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Sequence Information

Primary Database Link A0A0G3HVJ5
Original Database ID sp Q46855
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation subname: full=transcriptional
activator of yqhd protein {eco:0000313|embl:akk151
37.1};
Sequence Length 318

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region209-313
Protein Length318
Template PDB Code3mn2A
Template Region218-324
Sequence Identity25%
E-Value7.1e-11
GA3411
MPQS0.782289
z-DOPE-1.2
TSVMod MethodMSALL
TSVMod RMSD2.121
TSVMod NO350.933
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3mn2the crystal structure of a probable arac family transcriptional regulator from rhodopseudomonas palustris cga009
DBALI3mn2A 
JenaImageLibrary3mn2 
Target Sequence
UniProtKBT9SHA4SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EQZ98098.1};
InterProT9SHA4 
PFAMT9SHA4 
ProdomT9SHA4 
UniProtKBA0A0G3HVJ5SubName: Full=Transcriptional activator of yqhD protein {ECO:0000313|EMBL:AKK15137.1};
InterProA0A0G3HVJ5 
PFAMA0A0G3HVJ5 
ProdomA0A0G3HVJ5 
UniProtKBC4ZQT0SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC4ZQT0 
PFAMC4ZQT0 
ProdomC4ZQT0 
UniProtKBC9QYZ9SubName: Full=Predicted DNA-binding transcriptional regulator;SubName: Full=Transcriptional regulator, AraC family;
InterProC9QYZ9 
PFAMC9QYZ9 
ProdomC9QYZ9 
UniProtKBF9R311SubName: Full=Putative DNA-binding transcriptional regulator;
InterProF9R311 
PFAMF9R311 
ProdomF9R311 
UniProtKBB1XFG2SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProB1XFG2 
PFAMB1XFG2 
ProdomB1XFG2 
UniProtKBG2F719SubName: Full=Putative DNA-binding transcriptional regulator;
InterProG2F719 
PFAMG2F719 
ProdomG2F719 
UniProtKBH0QEH1SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProH0QEH1 
PFAMH0QEH1 
ProdomH0QEH1 
UniProtKBM2P5B1SubName: Full=DNA-binding transcriptional regulator;
InterProM2P5B1 
PFAMM2P5B1 
ProdomM2P5B1 
UniProtKBQ2M9I9RecName: Full=Uncharacterized HTH-type transcriptional regulator YqhC;
InterProQ2M9I9 
PFAMQ2M9I9 
ProdomQ2M9I9 
UniProtKBQ46855RecName: Full=Uncharacterized HTH-type transcriptional regulator YqhC;
InterProQ46855 
PFAMQ46855 
ProdomQ46855 
UniProtKBA0A2T3U7Y5SubName: Full=AraC family transcriptional regulator {ECO:0000313|EMBL:PSZ19598.1}SubName: Full=Transcriptional activator of yqhD {ECO:0000313|EMBL:GDJ57252.1}SubName: Full=Transcriptional regulator Yq
InterProA0A2T3U7Y5 
PFAMA0A2T3U7Y5 
ProdomA0A2T3U7Y5 
UniProtKBB1XFG2SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProB1XFG2 
PFAMB1XFG2 
ProdomB1XFG2 
UniProtKBC4ZQT0SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC4ZQT0 
PFAMC4ZQT0 
ProdomC4ZQT0 
UniProtKBC9QYZ9SubName: Full=Predicted DNA-binding transcriptional regulator;SubName: Full=Transcriptional regulator, AraC family;
InterProC9QYZ9 
PFAMC9QYZ9 
ProdomC9QYZ9 
UniProtKBF9R311SubName: Full=Putative DNA-binding transcriptional regulator;
InterProF9R311 
PFAMF9R311 
ProdomF9R311 
UniProtKBQ2M9I9Predicted DNA-binding transcriptional regulator
InterProQ2M9I9 
PFAMQ2M9I9 
ProdomQ2M9I9 
UniProtKBH0QEH1SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProH0QEH1 
PFAMH0QEH1 
ProdomH0QEH1 
UniProtKBG2F719SubName: Full=Putative DNA-binding transcriptional regulator;
InterProG2F719 
PFAMG2F719 
ProdomG2F719 
UniProtKBQ46855RecName: Full=Uncharacterized HTH-type transcriptional regulator YqhC;
InterProQ46855 
PFAMQ46855 
ProdomQ46855 
UniProtKBQ2M9I9RecName: Full=Uncharacterized HTH-type transcriptional regulator YqhC;
InterProQ2M9I9 
PFAMQ2M9I9 
ProdomQ2M9I9 
UniProtKBQ46855.2YQHC_ECOLI RecName: Full=Uncharacterized HTH-type transcriptional regulator yqhC
InterProQ46855.2 
PFAMQ46855.2 
ProdomQ46855.2 
RefSeqYP_002927920.1 putative DNA-binding transcriptional regulator [Escherichia coli BW2952]
RefSeqAP_003561.1 predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. W3110]
RefSeqNP_417483.2 transcriptional activator of yqhD [Escherichia coli str. K-12 substr. MG1655]
RefSeqYP_001731874.1 DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. DH10B]
GenPept170082554 DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. DH10B]
GenPept687678115YqhC DNA-binding transcriptional activator
GenPept687673826YqhC DNA-binding transcriptional activator
GenPept682120436transcriptional activator of yqhD
GenPept6648111YQHC_ECOLI RecName: Full=Uncharacterized HTH-type transcriptional regulator yqhC
GenPept557273771putative DNA-binding transcriptional regulator
GenPept359333223predicted DNA-binding transcriptional regulator
GenPept169890389predicted DNA-binding transcriptional regulator
GenPept315137605predicted DNA-binding transcriptional regulator
GenPept549814376transcriptional activator of yqhD
GenPept260447952transcriptional regulator, AraC family
GenPept238902124 putative DNA-binding transcriptional regulator [Escherichia coli BW2952]
GenPept238862287predicted DNA-binding transcriptional regulator
GenPept730584195transcriptional activator of yqhD
GenPept731471924transcriptional activator of yqhD
GenPept85675814predicted DNA-binding transcriptional regulator
GenPept87082197transcriptional activator of yqhD
GenPept89109781 predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. W3110]
GenPept90111526 transcriptional activator of yqhD [Escherichia coli str. K-12 substr. MG1655]
GenPept817592770transcriptional activator of yqhD
GenPept817588630transcriptional activator of yqhD
GenPept827623073transcriptional activator of yqhD protein
GenPept817584489transcriptional activator of yqhD
GenPept827619154transcriptional activator of yqhD protein
GenPept817580350transcriptional activator of yqhD
GenPept817576208transcriptional activator of yqhD
GenPept802136343transcriptional activator of yqhD
GenBankACR64285.1 predicted DNA-binding transcriptional regulator [Escherichia coli BW2952]
GenBankAAC76046.2 transcriptional activator of yqhD [Escherichia coli str. K-12 substr. MG1655]
GenBankACX38374.1 transcriptional regulator, AraC family [Escherichia coli DH1]
GenBankACB04096.1 predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. DH10B]