University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q46907
Original Database ID ref NP_417249.4
Organism Escherichia coli, Shigella boydii, etc.
Annotation recname: full=putative electron
transfer flavoprotein subunit
ygcq;
Sequence Length 286

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region2-282
Protein Length286
Template PDB Code1efvA
Template Region50-331
Sequence Identity23%
E-Value0
GA3411
MPQS1.25462
z-DOPE0.5
TSVMod MethodMSALL
TSVMod RMSD6.779
TSVMod NO350.571
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1efvthree-dimensional structure of human electron transfer flavoprotein to 2.1 a resolution ; PFAM: PF00766 PF01012 ; SCOP: 31633 31728
DBALI1efvA 
CATH3.40.50.1220 Domain: 1efvA01 TPP-binding domain (100%)
CATH3.40.50.620 Domain: 1efvA02 Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1 (84%)
JenaImageLibrary1efv 
Target Sequence
UniProtKBB2N0P8SubName: Full=Electron transfer flavoprotein;
InterProB2N0P8 
PFAMB2N0P8 
ProdomB2N0P8 
UniProtKBA0A070FNB2SubName: Full=Electron transfer flavoprotein {ECO:0000313|EMBL:KDV63984.1};
InterProA0A070FNB2 
PFAMA0A070FNB2 
ProdomA0A070FNB2 
UniProtKBA0A070STV6SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KDX20855.1};
InterProA0A070STV6 
PFAMA0A070STV6 
ProdomA0A070STV6 
UniProtKBA0A070Y8G3SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KDX87912.1};
InterProA0A070Y8G3 
PFAMA0A070Y8G3 
ProdomA0A070Y8G3 
UniProtKBA0A071AMV8SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KDY63944.1};
InterProA0A071AMV8 
PFAMA0A071AMV8 
ProdomA0A071AMV8 
UniProtKBA0A073GZS1SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KEJ66572.1};
InterProA0A073GZS1 
PFAMA0A073GZS1 
ProdomA0A073GZS1 
UniProtKBA0A073TBG3SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KEL24193.1};
InterProA0A073TBG3 
PFAMA0A073TBG3 
ProdomA0A073TBG3 
UniProtKBA0A079CUY6SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KDY13813.1};
InterProA0A079CUY6 
PFAMA0A079CUY6 
ProdomA0A079CUY6 
UniProtKBA0A079F8J9SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KDY54279.1};
InterProA0A079F8J9 
PFAMA0A079F8J9 
ProdomA0A079F8J9 
UniProtKBA0A080GIR0SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KEN89063.1};
InterProA0A080GIR0 
PFAMA0A080GIR0 
ProdomA0A080GIR0 
UniProtKBA0A0A0FHH6SubName: Full=Putative electron transfer flavoprotein subunit YgcQ {ECO:0000313|EMBL:KGM62601.1};
InterProA0A0A0FHH6 
PFAMA0A0A0FHH6 
ProdomA0A0A0FHH6 
UniProtKBA0A070CGQ1SubName: Full=Electron transfer flavoprotein {ECO:0000313|EMBL:KDV27953.1};
InterProA0A070CGQ1 
PFAMA0A070CGQ1 
ProdomA0A070CGQ1 
UniProtKBA0A069Z3S0SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KDU51900.1};
InterProA0A069Z3S0 
PFAMA0A069Z3S0 
ProdomA0A069Z3S0 
UniProtKBC6EJA3SubName: Full=Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ACT28026.1};
InterProC6EJA3 
PFAMC6EJA3 
ProdomC6EJA3 
UniProtKBG5VSZ6SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProG5VSZ6 
PFAMG5VSZ6 
ProdomG5VSZ6 
UniProtKBG5YKR3SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProG5YKR3 
PFAMG5YKR3 
ProdomG5YKR3 
UniProtKBB3ILS6SubName: Full=Electron transfer flavoprotein;
InterProB3ILS6 
PFAMB3ILS6 
ProdomB3ILS6 
UniProtKBB3XHA7SubName: Full=Electron transfer flavoprotein;
InterProB3XHA7 
PFAMB3XHA7 
ProdomB3XHA7 
UniProtKBG5XGF3SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProG5XGF3 
PFAMG5XGF3 
ProdomG5XGF3 
UniProtKBH4V514SubName: Full=Electron transfer flavoFAD-binding domain protein {ECO:0000313|EMBL:EHV54558.1};
InterProH4V514 
PFAMH4V514 
ProdomH4V514 
UniProtKBB7LXI2SubName: Full=Putative flavoprotein;
InterProB7LXI2 
PFAMB7LXI2 
ProdomB7LXI2 
UniProtKBC4ZZS3SubName: Full=Predicted flavoprotein;
InterProC4ZZS3 
PFAMC4ZZS3 
ProdomC4ZZS3 
UniProtKBH4UN26SubName: Full=Electron transfer flavoFAD-binding domain protein {ECO:0000313|EMBL:EHV55854.1};
InterProH4UN26 
PFAMH4UN26 
ProdomH4UN26 
UniProtKBG1YER2SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProG1YER2 
PFAMG1YER2 
ProdomG1YER2 
UniProtKBA0A0E1M0W6SubName: Full=Putative flavoprotein {ECO:0000313|EMBL:AJF57577.1};
InterProA0A0E1M0W6 
PFAMA0A0E1M0W6 
ProdomA0A0E1M0W6 
UniProtKBA0A0E1T8V9SubName: Full=Electron transfer flavoprotein {ECO:0000313|EMBL:EDU65877.1};
InterProA0A0E1T8V9 
PFAMA0A0E1T8V9 
ProdomA0A0E1T8V9 
UniProtKBF9QWX3SubName: Full=Putative flavoprotein;
InterProF9QWX3 
PFAMF9QWX3 
ProdomF9QWX3 
UniProtKBE9Y3K8SubName: Full=Electron transfer flavoprotein FAD-binding protein;
InterProE9Y3K8 
PFAME9Y3K8 
ProdomE9Y3K8 
UniProtKBE2WZ95SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProE2WZ95 
PFAME2WZ95 
ProdomE2WZ95 
UniProtKBC8U9K1SubName: Full=Predicted flavoprotein {ECO:0000313|EMBL:BAI32060.1};
InterProC8U9K1 
PFAMC8U9K1 
ProdomC8U9K1 
UniProtKBG2AYG7SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProG2AYG7 
PFAMG2AYG7 
ProdomG2AYG7 
UniProtKBG1ZMT7SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProG1ZMT7 
PFAMG1ZMT7 
ProdomG1ZMT7 
UniProtKBG5UBX7SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProG5UBX7 
PFAMG5UBX7 
ProdomG5UBX7 
UniProtKBG5U1Y2SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProG5U1Y2 
PFAMG5U1Y2 
ProdomG5U1Y2 
UniProtKBG5VD82SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProG5VD82 
PFAMG5VD82 
ProdomG5VD82 
UniProtKBG5WX68SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProG5WX68 
PFAMG5WX68 
ProdomG5WX68 
UniProtKBF4MB46SubName: Full=Putative uncharacterized protein;
InterProF4MB46 
PFAMF4MB46 
ProdomF4MB46 
UniProtKBF8YJC5SubName: Full=Putative flavoprotein;
InterProF8YJC5 
PFAMF8YJC5 
ProdomF8YJC5 
UniProtKBE6BAV6SubName: Full=Putative electron transfer flavoprotein subunit ygcQ {ECO:0000313|EMBL:EFU95790.1};
InterProE6BAV6 
PFAME6BAV6 
ProdomE6BAV6 
UniProtKBA0A0E2U2L4SubName: Full=Electron transfer flavoprotein {ECO:0000313|EMBL:EZE22638.1};
InterProA0A0E2U2L4 
PFAMA0A0E2U2L4 
ProdomA0A0E2U2L4 
UniProtKBA0A0E3MX13SubName: Full=Putative electron transfer flavoprotein subunit YgcQ {ECO:0000313|EMBL:AKA91820.1};
InterProA0A0E3MX13 
PFAMA0A0E3MX13 
ProdomA0A0E3MX13 
UniProtKBD7YBP7SubName: Full=Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EFJ94933.1};
InterProD7YBP7 
PFAMD7YBP7 
ProdomD7YBP7 
UniProtKBD8B7C0SubName: Full=Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EFJ65017.1};
InterProD8B7C0 
PFAMD8B7C0 
ProdomD8B7C0 
UniProtKBD8ASS6SubName: Full=Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EFK13811.1};
InterProD8ASS6 
PFAMD8ASS6 
ProdomD8ASS6 
UniProtKBE1HG78SubName: Full=Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EFK93074.1};
InterProE1HG78 
PFAME1HG78 
ProdomE1HG78 
UniProtKBD7ZXC8SubName: Full=Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EFK24449.1};
InterProD7ZXC8 
PFAMD7ZXC8 
ProdomD7ZXC8 
UniProtKBD6I092SubName: Full=Electron transfer flavoprotein subunit ygcQ {ECO:0000313|EMBL:EFE61614.2};
InterProD6I092 
PFAMD6I092 
ProdomD6I092 
UniProtKBE8Y837SubName: Full=Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ADX49634.1};
InterProE8Y837 
PFAME8Y837 
ProdomE8Y837 
UniProtKBE7HYX5SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProE7HYX5 
PFAME7HYX5 
ProdomE7HYX5 
UniProtKBB1IU72SubName: Full=Electron transfer flavoprotein alpha subunit;
InterProB1IU72 
PFAMB1IU72 
ProdomB1IU72 
UniProtKBG5W9Q4SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProG5W9Q4 
PFAMG5W9Q4 
ProdomG5W9Q4 
UniProtKBA0A026V8V7SubName: Full=Electron transfer flavoprotein {ECO:0000313|EMBL:EZA38489.1};
InterProA0A026V8V7 
PFAMA0A026V8V7 
ProdomA0A026V8V7 
UniProtKBH4W0E1SubName: Full=Electron transfer flavoFAD-binding domain protein;
InterProH4W0E1 
PFAMH4W0E1 
ProdomH4W0E1 
UniProtKBA0A069X4Z7SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KDU24950.1};
InterProA0A069X4Z7 
PFAMA0A069X4Z7 
ProdomA0A069X4Z7 
UniProtKBA0A070T4X1SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KDX24720.1};
InterProA0A070T4X1 
PFAMA0A070T4X1 
ProdomA0A070T4X1 
UniProtKBA0A074I7F4SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KEN96224.1};
InterProA0A074I7F4 
PFAMA0A074I7F4 
ProdomA0A074I7F4 
UniProtKBA0A0E0U2Z3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE57992.1};
InterProA0A0E0U2Z3 
PFAMA0A0E0U2Z3 
ProdomA0A0E0U2Z3 
UniProtKBA0A0I0WY07SubName: Full=Flavoprotein {ECO:0000313|EMBL:CSP02509.1};
InterProA0A0I0WY07 
PFAMA0A0I0WY07 
ProdomA0A0I0WY07 
UniProtKBE1HYK4SubName: Full=Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EFK74791.1};
InterProE1HYK4 
PFAME1HYK4 
ProdomE1HYK4 
UniProtKBE9X7S2SubName: Full=Electron transfer flavoprotein FAD-binding protein;
InterProE9X7S2 
PFAME9X7S2 
ProdomE9X7S2 
UniProtKBG0F3T9SubName: Full=Putative electron transfer flavoprotein subunit ygcQ {ECO:0000313|EMBL:AEJ58092.1};
InterProG0F3T9 
PFAMG0F3T9 
ProdomG0F3T9 
UniProtKBG5TKN9SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProG5TKN9 
PFAMG5TKN9 
ProdomG5TKN9 
UniProtKBB3WM52SubName: Full=Electron transfer flavoprotein;
InterProB3WM52 
PFAMB3WM52 
ProdomB3WM52 
UniProtKBB1XDI1SubName: Full=Predicted flavoprotein;
InterProB1XDI1 
PFAMB1XDI1 
ProdomB1XDI1 
UniProtKBG2F065SubName: Full=Putative flavoprotein;
InterProG2F065 
PFAMG2F065 
ProdomG2F065 
UniProtKBA0A029KH50SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:EZJ72370.1};
InterProA0A029KH50 
PFAMA0A029KH50 
ProdomA0A029KH50 
UniProtKBG2BD01SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProG2BD01 
PFAMG2BD01 
ProdomG2BD01 
UniProtKBA0A029M3M8SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:EZJ91751.1};
InterProA0A029M3M8 
PFAMA0A029M3M8 
ProdomA0A029M3M8 
UniProtKBA0A0G3HTQ0SubName: Full=Putative flavoprotein {ECO:0000313|EMBL:AKK15323.1};
InterProA0A0G3HTQ0 
PFAMA0A0G3HTQ0 
ProdomA0A0G3HTQ0 
UniProtKBG2AJS3SubName: Full=Putative electron transfer flavoprotein subunit ygcQ {ECO:0000313|EMBL:EGW88803.1};
InterProG2AJS3 
PFAMG2AJS3 
ProdomG2AJS3 
UniProtKBG5Y0I9SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProG5Y0I9 
PFAMG5Y0I9 
ProdomG5Y0I9 
UniProtKBA0A037Y8U2SubName: Full=Electron transfer flavoFAD-binding domain protein {ECO:0000313|EMBL:CEE08803.1};SubName: Full=Electron transfer flavoprotein {ECO:0000313|EMBL:KIH07124.1};SubName: Full=Electron transfer
InterProA0A037Y8U2 
PFAMA0A037Y8U2 
ProdomA0A037Y8U2 
UniProtKBA0A073VXV2SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KEL84542.1};
InterProA0A073VXV2 
PFAMA0A073VXV2 
ProdomA0A073VXV2 
UniProtKBA0A0H3X920SubName: Full=Flavoprotein {ECO:0000313|EMBL:AKM36300.1};
InterProA0A0H3X920 
PFAMA0A0H3X920 
ProdomA0A0H3X920 
UniProtKBE9VXZ4SubName: Full=Electron transfer flavoprotein FAD-binding protein;
InterProE9VXZ4 
PFAME9VXZ4 
ProdomE9VXZ4 
UniProtKBA7ZQL2SubName: Full=Electron transfer flavoprotein {ECO:0000313|EMBL:ABV21073.1};
InterProA7ZQL2 
PFAMA7ZQL2 
ProdomA7ZQL2 
UniProtKBG5XC09SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProG5XC09 
PFAMG5XC09 
ProdomG5XC09 
UniProtKBD7YL54SubName: Full=Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EFK01979.1};
InterProD7YL54 
PFAMD7YL54 
ProdomD7YL54 
UniProtKBD8BTM9SubName: Full=Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EFI89975.1};
InterProD8BTM9 
PFAMD8BTM9 
ProdomD8BTM9 
UniProtKBE0J247SubName: Full=Predicted flavoprotein {ECO:0000313|EMBL:ADT76378.1};SubName: Full=Putative flavoprotein {ECO:0000313|EMBL:AFH12561.1};
InterProE0J247 
PFAME0J247 
ProdomE0J247 
UniProtKBE7JZZ0SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProE7JZZ0 
PFAME7JZZ0 
ProdomE7JZZ0 
UniProtKBE9TMM6SubName: Full=Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EGB85491.1};
InterProE9TMM6 
PFAME9TMM6 
ProdomE9TMM6 
UniProtKBF9CKT4SubName: Full=Putative flavoprotein;
InterProF9CKT4 
PFAMF9CKT4 
ProdomF9CKT4 
UniProtKBF9I0Z8SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;SubName: Full=YgcQ;
InterProF9I0Z8 
PFAMF9I0Z8 
ProdomF9I0Z8 
UniProtKBC9R0B2SubName: Full=Electron transfer flavoprotein alpha subunit;SubName: Full=Uncharacterized protein;
InterProC9R0B2 
PFAMC9R0B2 
ProdomC9R0B2 
UniProtKBG2BT38SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProG2BT38 
PFAMG2BT38 
ProdomG2BT38 
UniProtKBG5UV62SubName: Full=Putative electron transfer flavoprotein subunit ygcQ;
InterProG5UV62 
PFAMG5UV62 
ProdomG5UV62 
UniProtKBA0A0E2TS40SubName: Full=Electron transfer flavoprotein {ECO:0000313|EMBL:EYV12330.1};
InterProA0A0E2TS40 
PFAMA0A0E2TS40 
ProdomA0A0E2TS40 
UniProtKBA0A0E0XYN7SubName: Full=Putative flavoprotein {ECO:0000313|EMBL:AFS73046.1};
InterProA0A0E0XYN7 
PFAMA0A0E0XYN7 
ProdomA0A0E0XYN7 
UniProtKBA0A079FYJ6SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KDY67108.1};
InterProA0A079FYJ6 
PFAMA0A079FYJ6 
ProdomA0A079FYJ6 
UniProtKBB3I936SubName: Full=Electron transfer flavoprotein;
InterProB3I936 
PFAMB3I936 
ProdomB3I936 
UniProtKBH0Q7Z5SubName: Full=Predicted flavoprotein;
InterProH0Q7Z5 
PFAMH0Q7Z5 
ProdomH0Q7Z5 
UniProtKBB7LEI7SubName: Full=YgcQ protein {ECO:0000313|EMBL:CAU98925.1};
InterProB7LEI7 
PFAMB7LEI7 
ProdomB7LEI7 
UniProtKBC5W871SubName: Full=Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ACT28026.1};
InterProC5W871 
PFAMC5W871 
ProdomC5W871 
UniProtKBA0A069XHP9SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KDU28620.1};
InterProA0A069XHP9 
PFAMA0A069XHP9 
ProdomA0A069XHP9 
UniProtKBA0A070CHK9SubName: Full=Electron transfer flavoprotein {ECO:0000313|EMBL:KDV28286.1};
InterProA0A070CHK9 
PFAMA0A070CHK9 
ProdomA0A070CHK9 
UniProtKBA0A070V7C4SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KDX46243.1};
InterProA0A070V7C4 
PFAMA0A070V7C4 
ProdomA0A070V7C4 
UniProtKBA0A071D7V3SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KDZ36506.1};
InterProA0A071D7V3 
PFAMA0A071D7V3 
ProdomA0A071D7V3 
UniProtKBA0A074IFJ1SubName: Full=Electron transfer flavodomain protein {ECO:0000313|EMBL:KEO08763.1};
InterProA0A074IFJ1 
PFAMA0A074IFJ1 
ProdomA0A074IFJ1 
UniProtKBC6UCP3SubName: Full=Predicted flavoprotein;
InterProC6UCP3 
PFAMC6UCP3 
ProdomC6UCP3