University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A024KU65
Original Database ID Custom ID
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation subname: full=predicted antimicrobial
peptide transporter subunit {eco:0000313|e
mbl:cdp68721.1};
Sequence Length 547

Dataset Information:

The newest dataset for this sequence was created on 2017-10-31. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region12-540
Protein Length547
Template PDB Code2wolA
Template Region15-560
Sequence Identity20%
E-Value0
GA3411
MPQS1.13519
z-DOPE0.1
TSVMod MethodMSALL
TSVMod RMSD6.82
TSVMod NO350.614
DatasetMW-update_D7282
ModPipe VersionSVN.r1610
Model Date2017-10-31

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2wolclavulanic acid biosynthesis oligopeptide permease-like binding protein 2
DBALI2wolA 
JenaImageLibrary2wol 
Target Sequence
UniProtKBF8YFW8SubName: Full=Antimicrobial peptide ABC transporter periplasmic binding protein SapA;
InterProF8YFW8 
PFAMF8YFW8 
ProdomF8YFW8 
UniProtKBI2P4M7SubName: Full=Peptide transport periplasmic protein sapA;
InterProI2P4M7 
PFAMI2P4M7 
ProdomI2P4M7 
UniProtKBJ9ZP74SubName: Full=Antimicrobial peptide ABC transporter periplasmic binding protein SapA;
InterProJ9ZP74 
PFAMJ9ZP74 
ProdomJ9ZP74 
UniProtKBI2I416SubName: Full=Antimicrobial peptide ABC transporter periplasmic binding protein SapA;
InterProI2I416 
PFAMI2I416 
ProdomI2I416 
UniProtKBG5W544SubName: Full=Peptide transport periplasmic protein sapA;
InterProG5W544 
PFAMG5W544 
ProdomG5W544 
UniProtKBK5HXU6SubName: Full=Bacterial extracellular solute-binding s, 5 Middle family protein;
InterProK5HXU6 
PFAMK5HXU6 
ProdomK5HXU6 
UniProtKBK3I503SubName: Full=Extracellular solute-binding protein;
InterProK3I503 
PFAMK3I503 
ProdomK3I503 
UniProtKBL1V979SubName: Full=Peptide transport periplasmic protein sapA;
InterProL1V979 
PFAML1V979 
ProdomL1V979 
UniProtKBB1XBP5SubName: Full=Predicted antimicrobial peptide transporter subunit; periplasmic-binding component of ABC superfamily;
InterProB1XBP5 
PFAMB1XBP5 
ProdomB1XBP5 
UniProtKBB2NCP5SubName: Full=Peptide ABC transporter, periplasmic peptide-binding protein;
InterProB2NCP5 
PFAMB2NCP5 
ProdomB2NCP5 
UniProtKBL1WWN1SubName: Full=Peptide transport periplasmic protein sapA;
InterProL1WWN1 
PFAML1WWN1 
ProdomL1WWN1 
UniProtKBI2R381SubName: Full=Peptide transport periplasmic protein sapA;
InterProI2R381 
PFAMI2R381 
ProdomI2R381 
UniProtKBG5WSC5SubName: Full=Peptide transport periplasmic protein sapA;
InterProG5WSC5 
PFAMG5WSC5 
ProdomG5WSC5 
UniProtKBG5W2I8SubName: Full=Peptide transport periplasmic protein sapA;
InterProG5W2I8 
PFAMG5W2I8 
ProdomG5W2I8 
UniProtKBL4C0A9SubName: Full=Peptide transport periplasmic protein sapA;
InterProL4C0A9 
PFAML4C0A9 
ProdomL4C0A9 
UniProtKBL4WS63SubName: Full=Peptide transport periplasmic protein sapA;
InterProL4WS63 
PFAML4WS63 
ProdomL4WS63 
UniProtKBF9I4E6SubName: Full=Peptide transport periplasmic protein sapA;SubName: Full=Uncharacterized protein;
InterProF9I4E6 
PFAMF9I4E6 
ProdomF9I4E6 
UniProtKBG1Y914SubName: Full=Peptide transport periplasmic protein sapA;
InterProG1Y914 
PFAMG1Y914 
ProdomG1Y914 
UniProtKBL4P4L2SubName: Full=Peptide transport periplasmic protein sapA;
InterProL4P4L2 
PFAML4P4L2 
ProdomL4P4L2 
UniProtKBL5I7L4SubName: Full=Peptide transport periplasmic protein sapA;
InterProL5I7L4 
PFAML5I7L4 
ProdomL5I7L4 
UniProtKBG5TGK8SubName: Full=Peptide transport periplasmic protein sapA;
InterProG5TGK8 
PFAMG5TGK8 
ProdomG5TGK8 
UniProtKBM2MVI8SubName: Full=Peptide ABC transporter, substrate-binding protein;
InterProM2MVI8 
PFAMM2MVI8 
ProdomM2MVI8 
UniProtKBG5U7F5SubName: Full=Peptide transport periplasmic protein sapA;
InterProG5U7F5 
PFAMG5U7F5 
ProdomG5U7F5 
UniProtKBG5UQU8SubName: Full=Peptide transport periplasmic protein sapA;
InterProG5UQU8 
PFAMG5UQU8 
ProdomG5UQU8 
UniProtKBB7L558SubName: Full=SapA protein {ECO:0000313|EMBL:CAU97314.1};
InterProB7L558 
PFAMB7L558 
ProdomB7L558 
UniProtKBL1X9N7SubName: Full=Peptide transport periplasmic protein sapA;
InterProL1X9N7 
PFAML1X9N7 
ProdomL1X9N7 
UniProtKBL2AR73SubName: Full=Peptide transport periplasmic protein sapA;
InterProL2AR73 
PFAML2AR73 
ProdomL2AR73 
UniProtKBL2ASF7SubName: Full=Peptide transport periplasmic protein sapA;
InterProL2ASF7 
PFAML2ASF7 
ProdomL2ASF7 
UniProtKBL2B632SubName: Full=Peptide transport periplasmic protein sapA;
InterProL2B632 
PFAML2B632 
ProdomL2B632 
UniProtKBL2CJX0SubName: Full=Peptide transport periplasmic protein sapA;
InterProL2CJX0 
PFAML2CJX0 
ProdomL2CJX0 
UniProtKBL2CRB5SubName: Full=Peptide transport periplasmic protein sapA;
InterProL2CRB5 
PFAML2CRB5 
ProdomL2CRB5 
UniProtKBL2DQE4SubName: Full=Peptide transport periplasmic protein sapA;
InterProL2DQE4 
PFAML2DQE4 
ProdomL2DQE4 
UniProtKBL2V4B1SubName: Full=Peptide transport periplasmic protein sapA {ECO:0000313|EMBL:ELC09694.1};
InterProL2V4B1 
PFAML2V4B1 
ProdomL2V4B1 
UniProtKBL2ZC37SubName: Full=Peptide transport periplasmic protein sapA;
InterProL2ZC37 
PFAML2ZC37 
ProdomL2ZC37 
UniProtKBL3BLP9SubName: Full=Peptide transport periplasmic protein sapA {ECO:0000313|EMBL:ELC88912.1};
InterProL3BLP9 
PFAML3BLP9 
ProdomL3BLP9 
UniProtKBL3TRX4SubName: Full=Peptide transport periplasmic protein sapA;
InterProL3TRX4 
PFAML3TRX4 
ProdomL3TRX4 
UniProtKBL2AP74SubName: Full=Peptide transport periplasmic protein sapA;
InterProL2AP74 
PFAML2AP74 
ProdomL2AP74 
UniProtKBL1ZUM8SubName: Full=Peptide transport periplasmic protein sapA;
InterProL1ZUM8 
PFAML1ZUM8 
ProdomL1ZUM8 
UniProtKBA0A0H3X7A7SubName: Full=Antimicrobial peptide transporter subunit {ECO:0000313|EMBL:AKM34853.1};
InterProA0A0H3X7A7 
PFAMA0A0H3X7A7 
ProdomA0A0H3X7A7 
UniProtKBA0A024KU65SubName: Full=Predicted antimicrobial peptide transporter subunit {ECO:0000313|EMBL:CDP68721.1};
InterProA0A024KU65 
PFAMA0A024KU65 
ProdomA0A024KU65 
UniProtKBA0A037YF46SubName: Full=Antimicrobial peptide transport ABC transporter periplasmic binding protein {ECO:0000313|EMBL:CCQ28493.2};SubName: Full=Bacterial extracellular solute-binding s, 5 Middle family protein
InterProA0A037YF46 
PFAMA0A037YF46 
ProdomA0A037YF46 
UniProtKBA0A070DC95SubName: Full=Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDV38122.1};
InterProA0A070DC95 
PFAMA0A070DC95 
ProdomA0A070DC95 
UniProtKBA0A073GW00SubName: Full=Bacterial extracellular solute-binding s, 5 Middle family protein {ECO:0000313|EMBL:KEJ69344.1};
InterProA0A073GW00 
PFAMA0A073GW00 
ProdomA0A073GW00 
UniProtKBA0A079FH36SubName: Full=Bacterial extracellular solute-binding s, 5 Middle family protein {ECO:0000313|EMBL:KDY54062.1};
InterProA0A079FH36 
PFAMA0A079FH36 
ProdomA0A079FH36 
UniProtKBA0A0E0Y1E8SubName: Full=Antimicrobial peptide ABC transporter periplasmic binding protein SapA {ECO:0000313|EMBL:AFS74657.1};
InterProA0A0E0Y1E8 
PFAMA0A0E0Y1E8 
ProdomA0A0E0Y1E8 
UniProtKBA0A0E1LWW6SubName: Full=Antimicrobial peptide transport ABC transporter periplasmic binding protein {ECO:0000313|EMBL:AJF56167.1};
InterProA0A0E1LWW6 
PFAMA0A0E1LWW6 
ProdomA0A0E1LWW6 
UniProtKBA0A0E1T8Z5SubName: Full=Peptide ABC transporter, periplasmic peptide-binding protein {ECO:0000313|EMBL:EDU65912.1};
InterProA0A0E1T8Z5 
PFAMA0A0E1T8Z5 
ProdomA0A0E1T8Z5 
UniProtKBA0A0E3KF26SubName: Full=Peptide transport periplasmic protein SapA {ECO:0000313|EMBL:AKA90368.1};
InterProA0A0E3KF26 
PFAMA0A0E3KF26 
ProdomA0A0E3KF26 
UniProtKBA0A0G3HHZ9SubName: Full=Antimicrobial peptide transport ABC transporter periplasmic binding protein {ECO:0000313|EMBL:AKK12951.1};
InterProA0A0G3HHZ9 
PFAMA0A0G3HHZ9 
ProdomA0A0G3HHZ9 
UniProtKBL4A0U8SubName: Full=Peptide transport periplasmic protein sapA;
InterProL4A0U8 
PFAML4A0U8 
ProdomL4A0U8 
UniProtKBL4FFI8SubName: Full=Peptide transport periplasmic protein sapA;
InterProL4FFI8 
PFAML4FFI8 
ProdomL4FFI8 
UniProtKBG5XQY2SubName: Full=Peptide transport periplasmic protein sapA;
InterProG5XQY2 
PFAMG5XQY2 
ProdomG5XQY2 
UniProtKBF9QXP0SubName: Full=Antimicrobial peptide ABC transporter periplasmic binding protein SapA;
InterProF9QXP0 
PFAMF9QXP0 
ProdomF9QXP0 
UniProtKBH1F4Z4SubName: Full=Peptide transport periplasmic protein sapA;
InterProH1F4Z4 
PFAMH1F4Z4 
ProdomH1F4Z4 
UniProtKBK0AP43SubName: Full=Antimicrobial peptide ABC transporter periplasmic binding protein SapA;
InterProK0AP43 
PFAMK0AP43 
ProdomK0AP43 
UniProtKBA7ZZN5SubName: Full=Peptide ABC transporter, periplasmic peptide-binding protein;
InterProA7ZZN5 
PFAMA7ZZN5 
ProdomA7ZZN5 
UniProtKBB6IA11SubName: Full=Peptide ABC transporter substrate binding component {ECO:0000313|EMBL:BAG76870.1};
InterProB6IA11 
PFAMB6IA11 
ProdomB6IA11 
UniProtKBC4ZTZ0SubName: Full=Predicted antimicrobial peptide transporter subunit;
InterProC4ZTZ0 
PFAMC4ZTZ0 
ProdomC4ZTZ0 
UniProtKBL1ZFG2SubName: Full=Peptide transport periplasmic protein sapA;
InterProL1ZFG2 
PFAML1ZFG2 
ProdomL1ZFG2 
UniProtKBL2BGY2SubName: Full=Peptide transport periplasmic protein sapA;
InterProL2BGY2 
PFAML2BGY2 
ProdomL2BGY2 
UniProtKBD6HW60SubName: Full=Peptide transport periplasmic protein sapA {ECO:0000313|EMBL:EFE63897.2};
InterProD6HW60 
PFAMD6HW60 
ProdomD6HW60 
UniProtKBE9WDY1SubName: Full=Bacterial extracellular solute-binding protein;
InterProE9WDY1 
PFAME9WDY1 
ProdomE9WDY1 
UniProtKBE9YA41SubName: Full=Extracellular solute-binding protein {ECO:0000313|EMBL:EGB68649.1};
InterProE9YA41 
PFAME9YA41 
ProdomE9YA41 
UniProtKBL3QZJ3SubName: Full=Peptide transport periplasmic protein sapA;
InterProL3QZJ3 
PFAML3QZJ3 
ProdomL3QZJ3 
UniProtKBG5XVZ5SubName: Full=Peptide transport periplasmic protein sapA;
InterProG5XVZ5 
PFAMG5XVZ5 
ProdomG5XVZ5 
UniProtKBE3PL54SubName: Full=Peptide ABC transporter, substrate-binding protein {ECO:0000313|EMBL:CBJ00901.1};
InterProE3PL54 
PFAME3PL54 
ProdomE3PL54 
UniProtKBG5X6T2SubName: Full=Peptide transport periplasmic protein sapA;
InterProG5X6T2 
PFAMG5X6T2 
ProdomG5X6T2 
UniProtKBL1X442SubName: Full=Peptide transport periplasmic protein sapA;
InterProL1X442 
PFAML1X442 
ProdomL1X442 
UniProtKBL2DCL5SubName: Full=Peptide transport periplasmic protein sapA;
InterProL2DCL5 
PFAML2DCL5 
ProdomL2DCL5 
UniProtKBL4VWJ5SubName: Full=Peptide transport periplasmic protein sapA {ECO:0000313|EMBL:ELI31151.1};
InterProL4VWJ5 
PFAML4VWJ5 
ProdomL4VWJ5 
UniProtKBH0QA61SubName: Full=Predicted antimicrobial peptide transporter subunit;
InterProH0QA61 
PFAMH0QA61 
ProdomH0QA61 
UniProtKBL1W0C3SubName: Full=Peptide transport periplasmic protein sapA;
InterProL1W0C3 
PFAML1W0C3 
ProdomL1W0C3 
UniProtKBL1Y423SubName: Full=Peptide transport periplasmic protein sapA;
InterProL1Y423 
PFAML1Y423 
ProdomL1Y423 
UniProtKBC6UGU2SubName: Full=Predicted antimicrobial peptide transporter subunit;
InterProC6UGU2 
PFAMC6UGU2 
ProdomC6UGU2 
UniProtKBL4H3B4SubName: Full=Peptide transport periplasmic protein sapA;
InterProL4H3B4 
PFAML4H3B4 
ProdomL4H3B4 
UniProtKBL4JQR9SubName: Full=Peptide transport periplasmic protein sapA;
InterProL4JQR9 
PFAML4JQR9 
ProdomL4JQR9 
UniProtKBF9CH62SubName: Full=Antimicrobial peptide ABC transporter periplasmic binding protein SapA;
InterProF9CH62 
PFAMF9CH62 
ProdomF9CH62 
UniProtKBL1XS93SubName: Full=Peptide transport periplasmic protein sapA;
InterProL1XS93 
PFAML1XS93 
ProdomL1XS93 
UniProtKBC5W3B1SubName: Full=Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACT29350.1};
InterProC5W3B1 
PFAMC5W3B1 
ProdomC5W3B1 
UniProtKBC6EFT8SubName: Full=Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACT29350.1};
InterProC6EFT8 
PFAMC6EFT8 
ProdomC6EFT8 
UniProtKBL1Z0J5SubName: Full=Peptide transport periplasmic protein sapA;
InterProL1Z0J5 
PFAML1Z0J5 
ProdomL1Z0J5 
UniProtKBC9QXQ4SubName: Full=Extracellular solute-binding protein family 5;Flags: Precursor;
InterProC9QXQ4 
PFAMC9QXQ4 
ProdomC9QXQ4 
UniProtKBL1YI15SubName: Full=Peptide transport periplasmic protein sapA;
InterProL1YI15 
PFAML1YI15 
ProdomL1YI15 
UniProtKBE2WU93SubName: Full=Peptide transport periplasmic protein sapA;
InterProE2WU93 
PFAME2WU93 
ProdomE2WU93 
UniProtKBL2DGF8SubName: Full=Peptide transport periplasmic protein sapA;
InterProL2DGF8 
PFAML2DGF8 
ProdomL2DGF8 
UniProtKBL3LIF4SubName: Full=Peptide transport periplasmic protein sapA;
InterProL3LIF4 
PFAML3LIF4 
ProdomL3LIF4 
UniProtKBE9WS61SubName: Full=Extracellular solute-binding protein;
InterProE9WS61 
PFAME9WS61 
ProdomE9WS61 
UniProtKBB7LY55SubName: Full=Antimicrobial peptide transporter subunit periplasmic-binding component of ABC superfamily transporter;
InterProB7LY55 
PFAMB7LY55 
ProdomB7LY55 
UniProtKBK0BIA0SubName: Full=Antimicrobial peptide ABC transporter periplasmic binding protein SapA;
InterProK0BIA0 
PFAMK0BIA0 
ProdomK0BIA0 
UniProtKBL1W4N2SubName: Full=Peptide transport periplasmic protein sapA;
InterProL1W4N2 
PFAML1W4N2 
ProdomL1W4N2 
UniProtKBL4ZZ46SubName: Full=Peptide transport periplasmic protein sapA;
InterProL4ZZ46 
PFAML4ZZ46 
ProdomL4ZZ46 
UniProtKBG2F1L0SubName: Full=Antimicrobial peptide ABC transporter periplasmic binding protein SapA;
InterProG2F1L0 
PFAMG2F1L0 
ProdomG2F1L0 
UniProtKBG5TWV5SubName: Full=Peptide transport periplasmic protein sapA;
InterProG5TWV5 
PFAMG5TWV5 
ProdomG5TWV5 
UniProtKBL4MZ42SubName: Full=Peptide transport periplasmic protein sapA;
InterProL4MZ42 
PFAML4MZ42 
ProdomL4MZ42 
UniProtKBG5YFV0SubName: Full=Peptide transport periplasmic protein sapA;
InterProG5YFV0 
PFAMG5YFV0 
ProdomG5YFV0 
UniProtKBI4J9X1SubName: Full=Peptide transport periplasmic protein sapA {ECO:0000313|EMBL:EIF86030.1};
InterProI4J9X1 
PFAMI4J9X1 
ProdomI4J9X1 
UniProtKBI4TLC3SubName: Full=Putative antimicrobial peptide transporter subunit;
InterProI4TLC3 
PFAMI4TLC3 
ProdomI4TLC3 
UniProtKBK3VBT5SubName: Full=Extracellular solute-binding protein;
InterProK3VBT5 
PFAMK3VBT5 
ProdomK3VBT5 
UniProtKBG5VMU0SubName: Full=Peptide transport periplasmic protein sapA;
InterProG5VMU0 
PFAMG5VMU0 
ProdomG5VMU0 
UniProtKBE9XYF5SubName: Full=Extracellular solute-binding protein;
InterProE9XYF5 
PFAME9XYF5 
ProdomE9XYF5