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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link Q47718
Original Database ID UP Q47718
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation recname: full=putative transposase
inso for insertion sequence element
is911b;
Sequence Length 198

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region107-174
Protein Length198
Template PDB Code1c0mA
Template Region55-121
Sequence Identity21%
E-Value0
GA3410.27
MPQS0.572234
z-DOPE-0.27
TSVMod MethodMSALL
TSVMod RMSD4.757
TSVMod NO350.649
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1c0mcrystal structure of rsv two-domain integrase ; EC: 2.7.7.49 ; PFAM: PF00552 PF00665 ; SCOP: 24635 33640
DBALI1c0mA 
CATH3.30.420.10 Domain: 1c0mA01 Nucleotidyltransferase; domain 5 (40%)
JenaImageLibrary1c0m 
Target Sequence
UniProtKBE6NVC2SubName: Full=KpLE2 phage-like element partial transposase, truncated protein;
InterProE6NVC2 
PFAME6NVC2 
ProdomE6NVC2 
UniProtKBE9VBW1SubName: Full=Putative uncharacterized protein;
InterProE9VBW1 
PFAME9VBW1 
ProdomE9VBW1 
UniProtKBE9XR94SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EGB70675.1};
InterProE9XR94 
PFAME9XR94 
ProdomE9XR94 
UniProtKBB7NGQ1SubName: Full=Transposase ORF B, IS911 {ECO:0000313|EMBL:CAR15964.1};
InterProB7NGQ1 
PFAMB7NGQ1 
ProdomB7NGQ1 
UniProtKBQ47718RecName: Full=Putative transposase InsO for insertion sequence element IS911B;
InterProQ47718 
PFAMQ47718 
ProdomQ47718 
UniProtKBB1XEQ9SubName: Full=KpLE2 phage-like element; partial transposase of insertion element IS911B;
InterProB1XEQ9 
PFAMB1XEQ9 
ProdomB1XEQ9 
UniProtKBA0A094VMW1SubName: Full=Transposase {ECO:0000313|EMBL:AJE58855.1};SubName: Full=Transposase InsO for insertion sequence element IS911B {ECO:0000313|EMBL:AIX66360.1};
InterProA0A094VMW1 
PFAMA0A094VMW1 
ProdomA0A094VMW1 
UniProtKBB7NGQ1SubName: Full=Transposase ORF B, IS911;
InterProB7NGQ1 
PFAMB7NGQ1 
ProdomB7NGQ1 
UniProtKBC5W5X5SubName: Full=InsO-2 protein;
InterProC5W5X5 
PFAMC5W5X5 
ProdomC5W5X5 
UniProtKBB1XEQ9SubName: Full=KpLE2 phage-like element; partial transposase of insertion element IS911B;
InterProB1XEQ9 
PFAMB1XEQ9 
ProdomB1XEQ9 
UniProtKBE6NVC2SubName: Full=KpLE2 phage-like element; partial transposase, truncated protein;
InterProE6NVC2 
PFAME6NVC2 
ProdomE6NVC2 
UniProtKBE9VBW1SubName: Full=Putative uncharacterized protein;
InterProE9VBW1 
PFAME9VBW1 
ProdomE9VBW1 
UniProtKBE9XR94SubName: Full=Putative uncharacterized protein;
InterProE9XR94 
PFAME9XR94 
ProdomE9XR94 
UniProtKBQ47718RecName: Full=Putative transposase InsO for insertion sequence element IS911B;
InterProQ47718 
PFAMQ47718 
ProdomQ47718 
UniProtKBQ47718.1INSO2_ECOLI RecName: Full=Putative transposase insO for insertion sequence element IS911B
InterProQ47718.1 
PFAMQ47718.1 
ProdomQ47718.1 
RefSeqYP_001733039.1 KpLE2 phage-like element; partial transposase of insertion element IS911B [Escherichia coli str. K-12 substr. DH10B]
RefSeqYP_002415436.1 transposase ORF B (fragment), IS911 [Escherichia coli UMN026]
RefSeqYP_003001833.1 hypothetical protein B21_04114 [Escherichia coli BL21]
GenPept1361150S56510 hypothetical protein o198 - Escherichia coli
GenPept242379802 insO-2 [Escherichia coli BL21(DE3)]
GenPept218707917 transposase ORF B (fragment), IS911 [Escherichia coli UMN026]
GenPept218435014transposase ORF B (fragment), IS911
GenPept1790737KpLE2 phage-like element; partial transposase of insertion element IS911B
GenPept170083719 KpLE2 phage-like element; partial transposase of insertion element IS911B [Escherichia coli str. K-12 substr. DH10B]
GenPept169891554KpLE2 phage-like element; partial transposase of insertion element IS911B
GenPept16132106 (NC_000913) putative transposase [Escherichia coli K12]
GenPept13627632INSO2_ECOLI RecName: Full=Putative transposase insO for insertion sequence element IS911B
GenPept251787529 hypothetical protein B21_04114 [Escherichia coli BL21]
GenPept315138836KpLE2 phage-like element; partial transposase, truncated protein
GenPept748272421transposase
GenPept723233717transposase InsO for insertion sequence element IS911B
GenPept687679349KpLE2 phage-like element; partial transposase
GenPept687675041KpLE2 phage-like element; partial transposase
GenPept537126ORF_o198
GenBankAAA97181.1 ORF_o198 [Escherichia coli str. K-12 substr. MG1655]
GenBankACB05261.1 KpLE2 phage-like element; partial transposase of insertion element IS911B [Escherichia coli str. K-12 substr. DH10B]
EMBLCAQ34631.1 
EMBLCAR15964.1