University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q6BEX0.1
Original Database ID ref YP_026286.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation ytfr_ecoli recname: full=uncharacterized
abc transporter atp-binding protein
ytf r
Sequence Length 500

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region5-491
Protein Length500
Template PDB Code4finA
Template Region1-532
Sequence Identity23%
E-Value0
GA3411
MPQS0.964
z-DOPE0.79
TSVMod MethodMSALL
TSVMod RMSD8.733
TSVMod NO350.554
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4fin
DBALI4finA 
JenaImageLibrary4fin 
Target Sequence
UniProtKBH4THI9SubName: Full=YtfR;
InterProH4THI9 
PFAMH4THI9 
ProdomH4THI9 
UniProtKBI0ZMJ5SubName: Full=Putative sugar transporter subunit: ATP-binding component of ABC superfamily protein;
InterProI0ZMJ5 
PFAMI0ZMJ5 
ProdomI0ZMJ5 
UniProtKBH6MK70SubName: Full=Uncharacterized protein;
InterProH6MK70 
PFAMH6MK70 
ProdomH6MK70 
UniProtKBH4UBP3SubName: Full=ABC transporter family protein;
InterProH4UBP3 
PFAMH4UBP3 
ProdomH4UBP3 
UniProtKBB1XEL2SubName: Full=Predicted sugar transporter subunit: ATP-binding component of ABC superfamily;
InterProB1XEL2 
PFAMB1XEL2 
ProdomB1XEL2 
UniProtKBA0A0H3PVN7SubName: Full=Putative sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDU93388.1};
InterProA0A0H3PVN7 
PFAMA0A0H3PVN7 
ProdomA0A0H3PVN7 
UniProtKBA0A0G3HLG3SubName: Full=Putative sugar transporter subunit: ATP-binding component of ABC superfamily protein {ECO:0000313|EMBL:AKK14116.1};
InterProA0A0G3HLG3 
PFAMA0A0G3HLG3 
ProdomA0A0G3HLG3 
UniProtKBA0A029LPQ8SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:EZJ86932.1};
InterProA0A029LPQ8 
PFAMA0A029LPQ8 
ProdomA0A029LPQ8 
UniProtKBA0A029JYG1SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:EZJ65646.1};
InterProA0A029JYG1 
PFAMA0A029JYG1 
ProdomA0A029JYG1 
UniProtKBA0A024L7N0SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:CEE04524.1};SubName: Full=Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:AKO55371.1};SubName: Full=Uncharacterized ABC trans
InterProA0A024L7N0 
PFAMA0A024L7N0 
ProdomA0A024L7N0 
UniProtKBL1FBV1SubName: Full=ABC transporter family protein;
InterProL1FBV1 
PFAML1FBV1 
ProdomL1FBV1 
UniProtKBL1A390SubName: Full=ABC transporter family protein;
InterProL1A390 
PFAML1A390 
ProdomL1A390 
UniProtKBL0YW38SubName: Full=ABC transporter family protein;
InterProL0YW38 
PFAML0YW38 
ProdomL0YW38 
UniProtKBK5H9J8SubName: Full=ABC transporter family protein;
InterProK5H9J8 
PFAMK5H9J8 
ProdomK5H9J8 
UniProtKBK3HNL1SubName: Full=ATP-binding component of ABC superfamily;
InterProK3HNL1 
PFAMK3HNL1 
ProdomK3HNL1 
UniProtKBK3DDG3SubName: Full=ATP-binding component of ABC superfamily;
InterProK3DDG3 
PFAMK3DDG3 
ProdomK3DDG3 
UniProtKBK3B5L8SubName: Full=ATP-binding component of ABC superfamily;
InterProK3B5L8 
PFAMK3B5L8 
ProdomK3B5L8 
UniProtKBU1DMD4SubName: Full=ABC transporter family protein;
InterProU1DMD4 
PFAMU1DMD4 
ProdomU1DMD4 
UniProtKBB3BB98SubName: Full=Putative sugar ABC transporter, ATP-binding protein;
InterProB3BB98 
PFAMB3BB98 
ProdomB3BB98 
UniProtKBH4TGA4SubName: Full=YtfR;
InterProH4TGA4 
PFAMH4TGA4 
ProdomH4TGA4 
UniProtKBH4SJX4SubName: Full=YtfR;
InterProH4SJX4 
PFAMH4SJX4 
ProdomH4SJX4 
UniProtKBH4RPH3SubName: Full=YtfR;
InterProH4RPH3 
PFAMH4RPH3 
ProdomH4RPH3 
UniProtKBH4R8J0SubName: Full=YtfR;
InterProH4R8J0 
PFAMH4R8J0 
ProdomH4R8J0 
UniProtKBH4QSH1SubName: Full=YtfR;
InterProH4QSH1 
PFAMH4QSH1 
ProdomH4QSH1 
UniProtKBH4NYC2SubName: Full=YtfR;
InterProH4NYC2 
PFAMH4NYC2 
ProdomH4NYC2 
UniProtKBH1E0Z6SubName: Full=Putative uncharacterized protein;
InterProH1E0Z6 
PFAMH1E0Z6 
ProdomH1E0Z6 
UniProtKBH0QG89SubName: Full=Predicted sugar transporter subunit;
InterProH0QG89 
PFAMH0QG89 
ProdomH0QG89 
UniProtKBG2F2C6SubName: Full=Putative uncharacterized protein;
InterProG2F2C6 
PFAMG2F2C6 
ProdomG2F2C6 
UniProtKBF9QXY7SubName: Full=Putative uncharacterized protein;
InterProF9QXY7 
PFAMF9QXY7 
ProdomF9QXY7 
UniProtKBE8IV33SubName: Full=Uncharacterized protein;
InterProE8IV33 
PFAME8IV33 
ProdomE8IV33 
UniProtKBE8I356SubName: Full=Uncharacterized protein;
InterProE8I356 
PFAME8I356 
ProdomE8I356 
UniProtKBE8HNM6SubName: Full=Uncharacterized protein;
InterProE8HNM6 
PFAME8HNM6 
ProdomE8HNM6 
UniProtKBE8HAF3SubName: Full=Uncharacterized protein;
InterProE8HAF3 
PFAME8HAF3 
ProdomE8HAF3 
UniProtKBD3QLE7SubName: Full=Uncharacterized ABC transporter ATP-binding protein ytfR {ECO:0000313|EMBL:ADD59476.1};
InterProD3QLE7 
PFAMD3QLE7 
ProdomD3QLE7 
UniProtKBC4ZRA3SubName: Full=Predicted sugar transporter subunit: ATP-binding component of ABC superfamily;
InterProC4ZRA3 
PFAMC4ZRA3 
ProdomC4ZRA3 
UniProtKBI5TQT0SubName: Full=ATP-binding component of ABC superfamily;
InterProI5TQT0 
PFAMI5TQT0 
ProdomI5TQT0 
UniProtKBK3GIR9SubName: Full=ATP-binding component of ABC superfamily;
InterProK3GIR9 
PFAMK3GIR9 
ProdomK3GIR9 
UniProtKBL1D5U0SubName: Full=ABC transporter family protein;
InterProL1D5U0 
PFAML1D5U0 
ProdomL1D5U0 
UniProtKBL0XG92SubName: Full=ABC transporter family protein;
InterProL0XG92 
PFAML0XG92 
ProdomL0XG92 
UniProtKBK3GQB3SubName: Full=ATP-binding component of ABC superfamily;
InterProK3GQB3 
PFAMK3GQB3 
ProdomK3GQB3 
UniProtKBK3FRZ7SubName: Full=ATP-binding component of ABC superfamily;
InterProK3FRZ7 
PFAMK3FRZ7 
ProdomK3FRZ7 
UniProtKBK3CK50SubName: Full=ATP-binding component of ABC superfamily;
InterProK3CK50 
PFAMK3CK50 
ProdomK3CK50 
UniProtKBI5S6Q1SubName: Full=ATP-binding component of ABC superfamily;
InterProI5S6Q1 
PFAMI5S6Q1 
ProdomI5S6Q1 
UniProtKBI5MQX4SubName: Full=ATP-binding component of ABC superfamily;
InterProI5MQX4 
PFAMI5MQX4 
ProdomI5MQX4 
UniProtKBP39327RecName: Full=Uncharacterized ABC transporter ATP-binding protein YtfR;
InterProP39327 
PFAMP39327 
ProdomP39327 
UniProtKBL1BC08SubName: Full=ABC transporter family protein;
InterProL1BC08 
PFAML1BC08 
ProdomL1BC08 
UniProtKBI5D862SubName: Full=ATP-binding component of ABC superfamily;
InterProI5D862 
PFAMI5D862 
ProdomI5D862 
UniProtKBM2NGH7SubName: Full=Uncharacterized protein;
InterProM2NGH7 
PFAMM2NGH7 
ProdomM2NGH7 
UniProtKBK2YMR4SubName: Full=ATP-binding component of ABC superfamily;
InterProK2YMR4 
PFAMK2YMR4 
ProdomK2YMR4 
UniProtKBL8YLC3SubName: Full=ABC transporter family protein;
InterProL8YLC3 
PFAML8YLC3 
ProdomL8YLC3 
UniProtKBL3LTS8SubName: Full=Sugar ABC transporter ATP-binding protein;
InterProL3LTS8 
PFAML3LTS8 
ProdomL3LTS8 
UniProtKBP39326RecName: Full=Uncharacterized ABC transporter ATP-binding protein YtfR;
InterProP39326 
PFAMP39326 
ProdomP39326 
UniProtKBL3EX39SubName: Full=Sugar ABC transporter ATP-binding protein;
InterProL3EX39 
PFAML3EX39 
ProdomL3EX39 
UniProtKBU1ABB7SubName: Full=ABC transporter family protein;
InterProU1ABB7 
PFAMU1ABB7 
ProdomU1ABB7 
UniProtKBL9G281SubName: Full=ABC transporter family protein;
InterProL9G281 
PFAML9G281 
ProdomL9G281 
UniProtKBU0NX64SubName: Full=ABC transporter family protein;
InterProU0NX64 
PFAMU0NX64 
ProdomU0NX64 
UniProtKBQ6BEX0RecName: Full=Uncharacterized ABC transporter ATP-binding protein YtfR;
InterProQ6BEX0 
PFAMQ6BEX0 
ProdomQ6BEX0 
UniProtKBQ2M677RecName: Full=Uncharacterized ABC transporter ATP-binding protein YtfR;
InterProQ2M677 
PFAMQ2M677 
ProdomQ2M677 
UniProtKBI5MJ03SubName: Full=ATP-binding component of ABC superfamily;
InterProI5MJ03 
PFAMI5MJ03 
ProdomI5MJ03 
UniProtKBU0YUR6SubName: Full=ABC transporter family protein;
InterProU0YUR6 
PFAMU0YUR6 
ProdomU0YUR6 
UniProtKBI5NVW0SubName: Full=ATP-binding component of ABC superfamily;
InterProI5NVW0 
PFAMI5NVW0 
ProdomI5NVW0 
UniProtKBU0NAI9SubName: Full=ABC transporter family protein;
InterProU0NAI9 
PFAMU0NAI9 
ProdomU0NAI9 
UniProtKBL9EW20SubName: Full=ABC transporter family protein;
InterProL9EW20 
PFAML9EW20 
ProdomL9EW20 
UniProtKBL9CG66SubName: Full=ABC transporter family protein;
InterProL9CG66 
PFAML9CG66 
ProdomL9CG66 
UniProtKBL5HUN2SubName: Full=Sugar ABC transporter ATP-binding protein;
InterProL5HUN2 
PFAML5HUN2 
ProdomL5HUN2 
UniProtKBL4I8H5SubName: Full=Sugar ABC transporter ATP-binding protein;
InterProL4I8H5 
PFAML4I8H5 
ProdomL4I8H5 
UniProtKBL1FUV5SubName: Full=ABC transporter family protein;
InterProL1FUV5 
PFAML1FUV5 
ProdomL1FUV5 
UniProtKBH4TGA4SubName: Full=YtfR;
InterProH4TGA4 
PFAMH4TGA4 
ProdomH4TGA4 
UniProtKBG2F2C6SubName: Full=Putative uncharacterized protein;
InterProG2F2C6 
PFAMG2F2C6 
ProdomG2F2C6 
UniProtKBH4SJX4SubName: Full=YtfR;
InterProH4SJX4 
PFAMH4SJX4 
ProdomH4SJX4 
UniProtKBI5S6Q1SubName: Full=ATP-binding component of ABC superfamily;
InterProI5S6Q1 
PFAMI5S6Q1 
ProdomI5S6Q1 
UniProtKBH0QG89SubName: Full=Predicted sugar transporter subunit;
InterProH0QG89 
PFAMH0QG89 
ProdomH0QG89 
UniProtKBH4UBP3SubName: Full=ABC transporter family protein;
InterProH4UBP3 
PFAMH4UBP3 
ProdomH4UBP3 
UniProtKBH4THI9SubName: Full=YtfR;
InterProH4THI9 
PFAMH4THI9 
ProdomH4THI9 
UniProtKBH1E0Z6SubName: Full=Putative uncharacterized protein;
InterProH1E0Z6 
PFAMH1E0Z6 
ProdomH1E0Z6 
UniProtKBH4RPH3SubName: Full=YtfR;
InterProH4RPH3 
PFAMH4RPH3 
ProdomH4RPH3 
UniProtKBH4R8J0SubName: Full=YtfR;
InterProH4R8J0 
PFAMH4R8J0 
ProdomH4R8J0 
UniProtKBH4QSH1SubName: Full=YtfR;
InterProH4QSH1 
PFAMH4QSH1 
ProdomH4QSH1 
UniProtKBH4NYC2SubName: Full=YtfR;
InterProH4NYC2 
PFAMH4NYC2 
ProdomH4NYC2 
UniProtKBF9QXY7SubName: Full=Putative uncharacterized protein;
InterProF9QXY7 
PFAMF9QXY7 
ProdomF9QXY7 
UniProtKBQ6BEX0Putative sugar transport protein (ABC superfamily, atp_bind)
InterProQ6BEX0 
PFAMQ6BEX0 
ProdomQ6BEX0 
UniProtKBI0ZMJ5SubName: Full=Putative sugar transporter subunit: ATP-binding component of ABC superfamily protein;
InterProI0ZMJ5 
PFAMI0ZMJ5 
ProdomI0ZMJ5 
UniProtKBA0A8F8DIP2SubName: Full=Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:QXZ36495.1}
InterProA0A8F8DIP2 
PFAMA0A8F8DIP2 
ProdomA0A8F8DIP2 
UniProtKBA0A891SFW3SubName: Full=Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:QRM83943.1}
InterProA0A891SFW3 
PFAMA0A891SFW3 
ProdomA0A891SFW3 
UniProtKBA0A7U8XDS6SubName: Full=Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EFA8945711.1}
InterProA0A7U8XDS6 
PFAMA0A7U8XDS6 
ProdomA0A7U8XDS6 
UniProtKBA0A6N0N9P6SubName: Full=Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:QKQ93135.1}
InterProA0A6N0N9P6 
PFAMA0A6N0N9P6 
ProdomA0A6N0N9P6 
UniProtKBA0A6M7HFQ6SubName: Full=Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:QKB25000.1}
InterProA0A6M7HFQ6 
PFAMA0A6M7HFQ6 
ProdomA0A6M7HFQ6 
UniProtKBA0A6M6UGA1SubName: Full=Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:QJZ69153.1}
InterProA0A6M6UGA1 
PFAMA0A6M6UGA1 
ProdomA0A6M6UGA1 
UniProtKBI5TQT0SubName: Full=ATP-binding component of ABC superfamily;
InterProI5TQT0 
PFAMI5TQT0 
ProdomI5TQT0 
UniProtKBB1XEL2SubName: Full=Predicted sugar transporter subunit: ATP-binding component of ABC superfamily;
InterProB1XEL2 
PFAMB1XEL2 
ProdomB1XEL2 
UniProtKBA0A6M7CR18SubName: Full=Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:QKA71491.1}
InterProA0A6M7CR18 
PFAMA0A6M7CR18 
ProdomA0A6M7CR18 
UniProtKBH6MK70SubName: Full=Uncharacterized protein;
InterProH6MK70 
PFAMH6MK70 
ProdomH6MK70 
UniProtKBE8IV33SubName: Full=Putative uncharacterized protein;
InterProE8IV33 
PFAME8IV33 
ProdomE8IV33 
UniProtKBE8I356SubName: Full=Putative uncharacterized protein;
InterProE8I356 
PFAME8I356 
ProdomE8I356 
UniProtKBE8HNM6SubName: Full=Putative uncharacterized protein;
InterProE8HNM6 
PFAME8HNM6 
ProdomE8HNM6 
UniProtKBE8HAF3SubName: Full=Uncharacterized protein;
InterProE8HAF3 
PFAME8HAF3 
ProdomE8HAF3 
UniProtKBQ2M677Predicted sugar transporter subunit
InterProQ2M677 
PFAMQ2M677 
ProdomQ2M677 
UniProtKBI5MJ03SubName: Full=ATP-binding component of ABC superfamily;
InterProI5MJ03 
PFAMI5MJ03 
ProdomI5MJ03 
UniProtKBD3QLE7SubName: Full=Uncharacterized ABC transporter ATP-binding protein ytfR;
InterProD3QLE7 
PFAMD3QLE7 
ProdomD3QLE7 
UniProtKBI5NVW0SubName: Full=ATP-binding component of ABC superfamily;
InterProI5NVW0 
PFAMI5NVW0 
ProdomI5NVW0