University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link O15554
Original Database ID EN ENSP00000496939.1
Organism Homo sapiens, synthetic construct
Annotation recname: full=intermediate conductance
calcium-activated potassium channel
prote in 4;short=sk4;short=skca
4;short=skca4;altname: full=ikca1;short=ik1
...
Sequence Length 427

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region376-414
Protein Length427
Template PDB Code6d42A
Template Region376-414
Sequence Identity100%
E-Value0
GA3410.51
MPQS1.10263
z-DOPE0.3
TSVMod MethodMSALL
TSVMod RMSD0.76
TSVMod NO351
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB6d42
DBALI6d42A 
JenaImageLibrary6d42 
Target Sequence
UniProtKBO15554RecName: Full=Intermediate conductance calcium-activated potassium channel protein 4;Short=SK4;Short=SKCa 4;Short=SKCa4;AltName: Full=IKCa1;Short=IK1;AltName: Full=KCa3.1;AltName: Full=KCa4;AltName: F
InterProO15554 
PFAMO15554 
ProdomO15554 
UniProtKBQ53XR4RecName: Full=Intermediate conductance calcium-activated potassium channel protein 4;Short=SK4;Short=SKCa 4;Short=SKCa4;AltName: Full=IKCa1;Short=IK1;AltName: Full=KCa3.1;AltName: Full=KCa4;AltName: F
InterProQ53XR4 
PFAMQ53XR4 
ProdomQ53XR4 
UniProtKBQ53XR4SubName: Full=Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4;SubName: Full=Potassium intermediate/small conductance calcium-activated channel, subfamily N, m
InterProQ53XR4 
PFAMQ53XR4 
ProdomQ53XR4 
UniProtKBQ53XR4RecName: Full=Intermediate conductance calcium-activated potassium channel protein 4;Short=SK4;Short=SKCa 4;Short=SKCa4;AltName: Full=IKCa1;Short=IK1;AltName: Full=KCa3.1;AltName: Full=KCa4;AltName: F
InterProQ53XR4 
PFAMQ53XR4 
ProdomQ53XR4 
UniProtKBO15554.1KCNN4_HUMAN RecName: Full=Intermediate conductance calcium-activated potassium channel protein 4; Short=SK4; Short=SKCa 4; Short=SKCa4; AltName: Full=IKCa1; Short=IK1; AltName: Full=KCa3.1; AltName: F
InterProO15554.1 
PFAMO15554.1 
ProdomO15554.1 
UniProtKBO15554RecName: Full=Intermediate conductance calcium-activated potassium channel protein 4;Short=SK4;Short=SKCa 4;Short=SKCa4;AltName: Full=IKCa1;Short=IK1;AltName: Full=KCa3.1;AltName: Full=KCa4;AltName: F
InterProO15554 
PFAMO15554 
ProdomO15554 
RefSeqNP_002241.1 intermediate conductance calcium-activated potassium channel protein 4 [Homo sapiens]
PDB6CNMAIntermediate conductance calcium-activated potassium channel protein 4
PDB6CNMBIntermediate conductance calcium-activated potassium channel protein 4
PDB6CNMCIntermediate conductance calcium-activated potassium channel protein 4
PDB6CNMDIntermediate conductance calcium-activated potassium channel protein 4
PDB6CNNAIntermediate conductance calcium-activated potassium channel protein 4
PDB6CNNBIntermediate conductance calcium-activated potassium channel protein 4
PDB6CNNCIntermediate conductance calcium-activated potassium channel protein 4
PDB6CNNDIntermediate conductance calcium-activated potassium channel protein 4
PDB6CNOAIntermediate conductance calcium-activated potassium channel protein 4
PDB6CNOBIntermediate conductance calcium-activated potassium channel protein 4
PDB6CNOCIntermediate conductance calcium-activated potassium channel protein 4
PDB6CNODIntermediate conductance calcium-activated potassium channel protein 4
GenPept649101075KCNN4, partial
GenPept6779589unnamed protein product
GenPept757281785Sequence 30 from patent US 8663930
GenPept11024411intermediate-conductance calcium-activated potassium channel 1
GenPept119577634potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4, isoform CRA_b
GenPept123996017potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4, partial
GenPept14764397 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 [Homo sapiens]
GenPept14764410 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 [Homo sapiens]
GenPept15306549 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 [Homo sapiens]
GenPept155721897Sequence 28 from patent US 7250262
GenPept15929837Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
GenPept17366160KCNN4_HUMAN RecName: Full=Intermediate conductance calcium-activated potassium channel protein 4; Short=SK4; Short=SKCa 4; Short=SKCa4; AltName: Full=IKCa1; Short=IK1; AltName: Full=KCa3.1; AltName: F
GenPept2584866calcium-activated potassium channel
GenPept61359595potassium intermediate/small conductance calcium-activated channel subfamily N member 4
GenPept568527662Sequence 2243 from patent US 8586006
GenPept4504859 intermediate conductance calcium-activated potassium channel protein 4 [Homo sapiens]
GenPept31694221Sequence 2 from patent US 6545028
GenPept30583691potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
GenPept298225877unnamed protein product
GenPept2674356intermediate conductance calcium-activated potassium channel
GenPept2655059hIK1
GenPept2645724intermediate conductance calcium-activated potassium channel
GenBankEAW57230.1 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4, isoform CRA_b [Homo sapiens]
GenBankABM85610.1 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 [synthetic construct]
GenBankAAX41740.1 potassium intermediate/small conductance calcium-activated channel subfamily N member 4 [synthetic construct]
GenBankAAP36094.1 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 [Homo sapiens]
GenBankAAG26917.1 intermediate-conductance calcium-activated potassium channel 1 [Homo sapiens]
GenBankAAC51913.1 intermediate conductance calcium-activated potassium channel [Homo sapiens]
GenBankAAC36804.1 intermediate conductance calcium-activated potassium channel [Homo sapiens]
GenBankAAC23541.1 hIK1 [Homo sapiens]
GenBankAAB82739.1 calcium-activated potassium channel [Homo sapiens]
GenBankAAH15337.1 Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 [Homo sapiens]
ENSEMBLENSP00000262888Intermediate conductance calcium-activated potassium channel protein 4 (SK4) (KCa4) (IK1) (IKCa1) (Putative Gardos channel). [Homo sapiens]
ENSEMBLENSP00000262888 
ENSEMBLENSP00000262888TDI sequence
ENSEMBLENSP00000262888 
UCSCGenomeBrowserO15554