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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link A0A024RDV3
Original Database ID NP_000312.2 re
Organism Homo sapiens, synthetic construct
Annotation subname: full=retinoblastoma 1
(including osteosarcoma), isoform
cra_a;
Sequence Length 928

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region53-771
Protein Length928
Template PDB Code4eljA
Template Region53-771
Sequence Identity100%
E-Value0
GA3411
MPQS1.73008
z-DOPE-0.85
TSVMod MethodMSRED
TSVMod RMSD0.806
TSVMod NO350.852
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB4elj
DBALI4eljA 
JenaImageLibrary4elj 
Target Sequence
UniProtKBQ8IZL4RecName: Full=Retinoblastoma-associated protein;AltName: Full=p105-Rb;AltName: Full=pRb;Short=Rb;AltName: Full=pp110;
InterProQ8IZL4 
PFAMQ8IZL4 
ProdomQ8IZL4 
UniProtKBA8K5E3RecName: Full=Retinoblastoma-associated protein;AltName: Full=p105-Rb;AltName: Full=pRb;Short=Rb;AltName: Full=pp110;
InterProA8K5E3 
PFAMA8K5E3 
ProdomA8K5E3 
UniProtKBA0A024RDV3SubName: Full=Retinoblastoma 1 (Including osteosarcoma), isoform CRA_a;
InterProA0A024RDV3 
PFAMA0A024RDV3 
ProdomA0A024RDV3 
UniProtKBP06400RecName: Full=Retinoblastoma-associated protein;AltName: Full=p105-Rb;AltName: Full=pRb;Short=Rb;AltName: Full=pp110;
InterProP06400 
PFAMP06400 
ProdomP06400 
UniProtKBP78499RecName: Full=Retinoblastoma-associated protein;AltName: Full=p105-Rb;AltName: Full=pRb;Short=Rb;AltName: Full=pp110;
InterProP78499 
PFAMP78499 
ProdomP78499 
UniProtKBQ5VW46RecName: Full=Retinoblastoma-associated protein;AltName: Full=p105-Rb;AltName: Full=pRb;Short=Rb;AltName: Full=pp110;
InterProQ5VW46 
PFAMQ5VW46 
ProdomQ5VW46 
UniProtKBQ5VW46Retinoblastoma 1 (Including osteosarcoma)
InterProQ5VW46 
PFAMQ5VW46 
ProdomQ5VW46 
UniProtKBA8K5E3SubName: Full=cDNA FLJ75028, highly similar to Homo sapiens retinoblastoma 1 (including osteosarcoma) (RB1), mRNA;SubName: Full=Retinoblastoma 1 (Including osteosarcoma), isoform CRA_a;
InterProA8K5E3 
PFAMA8K5E3 
ProdomA8K5E3 
UniProtKBA8K5E3RecName: Full=Retinoblastoma-associated protein;AltName: Full=p105-Rb;AltName: Full=pRb;Short=Rb;AltName: Full=pp110;
InterProA8K5E3 
PFAMA8K5E3 
ProdomA8K5E3 
UniProtKBQ8IZL4RecName: Full=Retinoblastoma-associated protein;AltName: Full=p105-Rb;AltName: Full=pRb;Short=Rb;AltName: Full=pp110;
InterProQ8IZL4 
PFAMQ8IZL4 
ProdomQ8IZL4 
UniProtKBP06400RecName: Full=Retinoblastoma-associated protein;AltName: Full=p105-Rb;AltName: Full=pRb;Short=Rb;AltName: Full=pp110;
InterProP06400 
PFAMP06400 
ProdomP06400 
UniProtKBP78499RecName: Full=Retinoblastoma-associated protein;AltName: Full=p105-Rb;AltName: Full=pRb;Short=Rb;AltName: Full=pp110;
InterProP78499 
PFAMP78499 
ProdomP78499 
UniProtKBQ5VW46RecName: Full=Retinoblastoma-associated protein;AltName: Full=p105-Rb;AltName: Full=pRb;Short=Rb;AltName: Full=pp110;
InterProQ5VW46 
PFAMQ5VW46 
ProdomQ5VW46 
UniProtKBP06400.2RB_HUMAN RecName: Full=Retinoblastoma-associated protein; AltName: Full=p105-Rb; AltName: Full=pRb; Short=Rb; AltName: Full=pp110
InterProP06400.2 
PFAMP06400.2 
ProdomP06400.2 
RefSeqNP_000312.2 retinoblastoma-associated protein [Homo sapiens]
RefSeqXP_003811470.1retinoblastoma-associated protein
GenPept123981322retinoblastoma 1 (including osteosarcoma)
GenPept55661102retinoblastoma 1 (including osteosarcoma)
GenPept756900481Sequence 2 from patent US 8852579
GenPept71864RBHU retinoblastoma-associated protein - human
GenPept67609647Sequence 4 from patent US 6902731
GenPept649120885RB1, partial
GenPept55665079retinoblastoma 1 (including osteosarcoma)
GenPept793995retinoblastoma suspectibility protein
GenPept534485950Sequence 16 from patent US 8506948
GenPept112023517Sequence 8 from patent US 7052908
GenPept112043824Sequence 2 from patent US 7060688
GenPept115827753Sequence 2 from patent US 7105156
GenPept119629198retinoblastoma 1 (including osteosarcoma), isoform CRA_a
GenPept119629199retinoblastoma 1 (including osteosarcoma), isoform CRA_a
GenPept123996153retinoblastoma 1 (including osteosarcoma), partial
GenPept12807967Sequence 4 from patent US 6074850
GenPept132164RB_HUMAN RecName: Full=Retinoblastoma-associated protein; AltName: Full=p105-Rb; AltName: Full=pRb; Short=Rb; AltName: Full=pp110
GenPept158255952unnamed protein product
GenPept108773787 retinoblastoma-associated protein [Homo sapiens]
GenPept10065385Sequence 5 from patent US 5998134
GenPept521212retinoblastoma susceptibility protein
GenPept47243474Sequence 8 from patent US 6699714
GenPept331631120Sequence 1290 from patent US 7919467
GenPept3210144I81847 Sequence 1 from patent US 5710255
GenPept292421retinoblastoma susceptibility protein
GenPept26252120Retinoblastoma 1
GenPept24660140Retinoblastoma 1
GenPept21508943Sequence 4 from patent US 6379927
GenPept190963retinoblastoma suceptibility protein
GenPept190946retinoblastoma-associated protein
GenBankEAX08794.1 retinoblastoma 1 (including osteosarcoma), isoform CRA_a [Homo sapiens]
GenBankEAX08793.1 retinoblastoma 1 (including osteosarcoma), isoform CRA_a [Homo sapiens]
GenBankAAA53483.1 retinoblastoma susceptibility protein [Homo sapiens]
GenBankAAA53484.1 retinoblastoma susceptibility protein [Homo sapiens]
GenBankAAA69806.1 retinoblastoma-associated protein [Homo sapiens]
GenBankAAA69808.1 retinoblastoma suceptibility protein [Homo sapiens]
GenBankAAB59465.1 retinoblastoma suspectibility protein [Homo sapiens]
GenBankAAH39060.1 Retinoblastoma 1 [Homo sapiens]
GenBankAAH40540.1 Retinoblastoma 1 [Homo sapiens]
GenBankABM82490.1 retinoblastoma 1 (including osteosarcoma) [synthetic construct]
GenBankABM85678.1 retinoblastoma 1 (including osteosarcoma) [synthetic construct]
ENSEMBLENSP00000267163Retinoblastoma-associated protein (PP110) (P105-RB) (RB). [Homo sapiens]
EMBLCAH70901.1 
EMBLCAH72243.1 
UCSCGenomeBrowserP06400 
ENSEMBLENSP00000267163 
ENSEMBLENSP00000267163TDI sequence
ENSEMBLENSP00000267163