University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A8K306
Original Database ID EN GENSCAN00000032832
Organism Pan paniscus, Pan troglodytes, etc.
Annotation subname: full=cdna flj77053, highly
similar to homo sapiens protein
tyrosine pho sphatase, non-receptor
type 6 (ptpn6), transcript variant
1, mrna;sub ...
Sequence Length 595

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region1-529
Protein Length595
Template PDB Code3ps5A
Template Region1-529
Sequence Identity100%
E-Value0
GA3411
MPQS2.10858
z-DOPE-1.28
TSVMod MethodMSALL
TSVMod RMSD0.553
TSVMod NO350.955
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB3ps5
DBALI3ps5A 
JenaImageLibrary3ps5 
Target Sequence
UniProtKBQ9UK67RecName: Full=Tyrosine-protein phosphatase non-receptor type 6;EC=3.1.3.48;AltName: Full=Hematopoietic cell protein-tyrosine phosphatase;AltName: Full=Protein-tyrosine phosphatase 1C;Short=PTP-1C;AltN
InterProQ9UK67 
PFAMQ9UK67 
ProdomQ9UK67 
UniProtKBQ969V8RecName: Full=Tyrosine-protein phosphatase non-receptor type 6;EC=3.1.3.48;AltName: Full=Hematopoietic cell protein-tyrosine phosphatase;AltName: Full=Protein-tyrosine phosphatase 1C;Short=PTP-1C;AltN
InterProQ969V8 
PFAMQ969V8 
ProdomQ969V8 
UniProtKBP29350RecName: Full=Tyrosine-protein phosphatase non-receptor type 6;EC=3.1.3.48;AltName: Full=Hematopoietic cell protein-tyrosine phosphatase;AltName: Full=Protein-tyrosine phosphatase 1C;Short=PTP-1C;AltN
InterProP29350 
PFAMP29350 
ProdomP29350 
UniProtKBA8K306RecName: Full=Tyrosine-protein phosphatase non-receptor type 6;EC=3.1.3.48;AltName: Full=Hematopoietic cell protein-tyrosine phosphatase;AltName: Full=Protein-tyrosine phosphatase 1C;Short=PTP-1C;AltN
InterProA8K306 
PFAMA8K306 
ProdomA8K306 
UniProtKBG3V0F8RecName: Full=Tyrosine-protein phosphatase non-receptor type 6;EC=3.1.3.48;AltName: Full=Hematopoietic cell protein-tyrosine phosphatase;AltName: Full=Protein-tyrosine phosphatase 1C;Short=PTP-1C;AltN
InterProG3V0F8 
PFAMG3V0F8 
ProdomG3V0F8 
UniProtKBA0A6D2VTD8Tyrosine-protein phosphatase non-receptor type {ECO:0000256|PIRNR:PIRNR000929}EC=3.1.3.48 {ECO:0000256|PIRNR:PIRNR000929}
InterProA0A6D2VTD8 
PFAMA0A6D2VTD8 
ProdomA0A6D2VTD8 
UniProtKBA0A2I3RC07Tyrosine-protein phosphatase non-receptor type {ECO:0000256|PIRNR:PIRNR000929}EC=3.1.3.48 {ECO:0000256|PIRNR:PIRNR000929}
InterProA0A2I3RC07 
PFAMA0A2I3RC07 
ProdomA0A2I3RC07 
UniProtKBA0A2R8ZVQ8Tyrosine-protein phosphatase non-receptor type {ECO:0000256|PIRNR:PIRNR000929}EC=3.1.3.48 {ECO:0000256|PIRNR:PIRNR000929}
InterProA0A2R8ZVQ8 
PFAMA0A2R8ZVQ8 
ProdomA0A2R8ZVQ8 
UniProtKBA8K306SubName: Full=cDNA FLJ77053, highly similar to Homo sapiens protein tyrosine phosphatase, non-receptor type 6 (PTPN6), transcript variant 1, mRNA;SubName: Full=Protein tyrosine phosphatase, non-recept
InterProA8K306 
PFAMA8K306 
ProdomA8K306 
UniProtKBA0A2J8JEF7Tyrosine-protein phosphatase non-receptor type {ECO:0000256|PIRNR:PIRNR000929}EC=3.1.3.48 {ECO:0000256|PIRNR:PIRNR000929}
InterProA0A2J8JEF7 
PFAMA0A2J8JEF7 
ProdomA0A2J8JEF7 
UniProtKBP29350RecName: Full=Tyrosine-protein phosphatase non-receptor type 6;EC=3.1.3.48;AltName: Full=Hematopoietic cell protein-tyrosine phosphatase;AltName: Full=Protein-tyrosine phosphatase 1C;Short=PTP-1C;AltN
InterProP29350 
PFAMP29350 
ProdomP29350 
UniProtKBA8K306RecName: Full=Tyrosine-protein phosphatase non-receptor type 6;EC=3.1.3.48;AltName: Full=Hematopoietic cell protein-tyrosine phosphatase;AltName: Full=Protein-tyrosine phosphatase 1C;Short=PTP-1C;AltN
InterProA8K306 
PFAMA8K306 
ProdomA8K306 
UniProtKBP29350.1PTN6_HUMAN RecName: Full=Tyrosine-protein phosphatase non-receptor type 6; AltName: Full=Hematopoietic cell protein-tyrosine phosphatase; AltName: Full=Protein-tyrosine phosphatase 1C; Short=PTP-1C; A
InterProP29350.1 
PFAMP29350.1 
ProdomP29350.1 
UniProtKBQ969V8RecName: Full=Tyrosine-protein phosphatase non-receptor type 6;EC=3.1.3.48;AltName: Full=Hematopoietic cell protein-tyrosine phosphatase;AltName: Full=Protein-tyrosine phosphatase 1C;Short=PTP-1C;AltN
InterProQ969V8 
PFAMQ969V8 
ProdomQ969V8 
UniProtKBQ9UK67RecName: Full=Tyrosine-protein phosphatase non-receptor type 6;EC=3.1.3.48;AltName: Full=Hematopoietic cell protein-tyrosine phosphatase;AltName: Full=Protein-tyrosine phosphatase 1C;Short=PTP-1C;AltN
InterProQ9UK67 
PFAMQ9UK67 
ProdomQ9UK67 
UniProtKBG3V0F8RecName: Full=Tyrosine-protein phosphatase non-receptor type 6;EC=3.1.3.48;AltName: Full=Hematopoietic cell protein-tyrosine phosphatase;AltName: Full=Protein-tyrosine phosphatase 1C;Short=PTP-1C;AltN
InterProG3V0F8 
PFAMG3V0F8 
ProdomG3V0F8 
RefSeqNP_002822.2 tyrosine-protein phosphatase non-receptor type 6 isoform 1 [Homo sapiens]
RefSeqXP_024304874.1tyrosine-protein phosphatase non-receptor type 6 isoform X2
GenPept915839991Sequence 117 from patent US 9012145
GenPept2144455S20825 protein-tyrosine-phosphatase (EC 3.1.3.48), nonreceptor type 6 - human
GenPept183916hematopoietic cell phophatase
GenPept18104989 tyrosine-protein phosphatase non-receptor type 6 isoform 1 [Homo sapiens]
GenPept1732419protein tyrosine phosphatase 1C
GenPept158261865unnamed protein product
GenPept14784106 protein tyrosine phosphatase, non-receptor type 6 [Homo sapiens]
GenPept14766654 protein tyrosine phosphatase, non-receptor type 6 [Homo sapiens]
GenPept131469PTN6_HUMAN RecName: Full=Tyrosine-protein phosphatase non-receptor type 6; AltName: Full=Hematopoietic cell protein-tyrosine phosphatase; AltName: Full=Protein-tyrosine phosphatase 1C; Short=PTP-1C; A
GenPept311641393unnamed protein product
GenPept34014276protein tyrosine phosphatase SHP-1
GenPept592999368Sequence 132 from patent US 8647822
GenPept568533850Sequence 19615 from patent US 8586006
GenPept414902703Sequence 129 from patent US 8298775
GenPept353304852Sequence 117 from patent US 8039210
GenPept119609109protein tyrosine phosphatase, non-receptor type 6, isoform CRA_d
GenBankAAA35963.1 hematopoietic cell phophatase [Homo sapiens]
GenBankAAB51323.1 protein tyrosine phosphatase 1C [Homo sapiens]
GenBankEAW88703.1 protein tyrosine phosphatase, non-receptor type 6, isoform CRA_d [Homo sapiens]
ENSEMBLENSP00000326010Tyrosine-protein phosphatase, non-receptor type 6 (EC 3.1.3.48) (Protein-tyrosine phosphatase 1C) (PTP-1C) (Hematopoietic cell protein-tyrosine phosphatase) (SH-PTP1) (Protein-tyrosine phosphatase SHP
UCSCGenomeBrowserP29350 
ENSEMBLENSP00000326010 
ENSEMBLENSP00000326010TDI sequence
ENSEMBLENSP00000326010