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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link B9EJD6
Original Database ID sp P52292
Organism Homo sapiens
Annotation subname: full=karyopherin alpha
2 (rag cohort 1, importin alpha
1);subname: full =karyopherin
alpha 2 (rag cohort 1, importin
alpha 1), isoform cra_b;
Sequence Length 529

Dataset Information:

The newest dataset for this sequence was created on 2020-09-11. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region44-496
Protein Length529
Template PDB Code3tpoA
Template Region44-496
Sequence Identity94%
E-Value0
GA3411
MPQS2.08023
z-DOPE-2.25
TSVMod MethodMSALL
TSVMod RMSD1.72
TSVMod NO350.948
DatasetMW-sars_cov_2
ModPipe VersionSVN.r1701
Model Date2020-09-11

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB3tpo
DBALI3tpoA 
JenaImageLibrary3tpo 
Target Sequence
UniProtKBQ9BRU5RecName: Full=Importin subunit alpha-2;AltName: Full=Karyopherin subunit alpha-2;AltName: Full=RAG cohort protein 1;AltName: Full=SRP1-alpha;
InterProQ9BRU5 
PFAMQ9BRU5 
ProdomQ9BRU5 
UniProtKBQ53YE3RecName: Full=Importin subunit alpha-2;AltName: Full=Karyopherin subunit alpha-2;AltName: Full=RAG cohort protein 1;AltName: Full=SRP1-alpha;
InterProQ53YE3 
PFAMQ53YE3 
ProdomQ53YE3 
UniProtKBP52292RecName: Full=Importin subunit alpha-2;AltName: Full=Karyopherin subunit alpha-2;AltName: Full=RAG cohort protein 1;AltName: Full=SRP1-alpha;
InterProP52292 
PFAMP52292 
ProdomP52292 
UniProtKBB9EJD6RecName: Full=Importin subunit alpha-2;AltName: Full=Karyopherin subunit alpha-2;AltName: Full=RAG cohort protein 1;AltName: Full=SRP1-alpha;
InterProB9EJD6 
PFAMB9EJD6 
ProdomB9EJD6 
UniProtKBB9EJD6SubName: Full=Karyopherin alpha 2 (RAG cohort 1, importin alpha 1);SubName: Full=Karyopherin alpha 2 (RAG cohort 1, importin alpha 1), isoform CRA_b;
InterProB9EJD6 
PFAMB9EJD6 
ProdomB9EJD6 
UniProtKBB9EJD6RecName: Full=Importin subunit alpha-1;AltName: Full=Karyopherin subunit alpha-2;AltName: Full=RAG cohort protein 1;AltName: Full=SRP1-alpha;
InterProB9EJD6 
PFAMB9EJD6 
ProdomB9EJD6 
UniProtKBQ9BRU5RecName: Full=Importin subunit alpha-1;AltName: Full=Karyopherin subunit alpha-2;AltName: Full=RAG cohort protein 1;AltName: Full=SRP1-alpha;
InterProQ9BRU5 
PFAMQ9BRU5 
ProdomQ9BRU5 
UniProtKBQ53YE3RecName: Full=Importin subunit alpha-1;AltName: Full=Karyopherin subunit alpha-2;AltName: Full=RAG cohort protein 1;AltName: Full=SRP1-alpha;
InterProQ53YE3 
PFAMQ53YE3 
ProdomQ53YE3 
UniProtKBP52292.1IMA2_HUMAN RecName: Full=Importin subunit alpha-2; AltName: Full=Karyopherin subunit alpha-2; AltName: Full=RAG cohort protein 1; AltName: Full=SRP1-alpha
InterProP52292.1 
PFAMP52292.1 
ProdomP52292.1 
UniProtKBP52292RecName: Full=Importin subunit alpha-1;AltName: Full=Karyopherin subunit alpha-2;AltName: Full=RAG cohort protein 1;AltName: Full=SRP1-alpha;
InterProP52292 
PFAMP52292 
ProdomP52292 
RefSeqNP_002257.1 importin subunit alpha-2 [Homo sapiens]
GenPept1708480IMA2_HUMAN RecName: Full=Importin subunit alpha-2; AltName: Full=Karyopherin subunit alpha-2; AltName: Full=RAG cohort protein 1; AltName: Full=SRP1-alpha
GenPept10053813Sequence 4 from patent US 5965394
GenPept15865453karyopherin alpha 2
GenPept119609447karyopherin alpha 2 (RAG cohort 1, importin alpha 1), isoform CRA_b
GenPept223462041Karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
GenPept2135835A56516 nuclear localization sequence receptor SRP1 alpha - human
GenPept261858328karyopherin alpha 2, partial
GenPept4504897 importin subunit alpha-2 [Homo sapiens]
GenPept53972173Sequence 1185 from patent US 6753314
GenPept791185Rch1
GenPept899539hSRP1alpha
GenBankAAA65700.1 Rch1 [Homo sapiens]
GenBankAAA69957.1 hSRP1alpha [Homo sapiens]
GenBankEAW89041.1 karyopherin alpha 2 (RAG cohort 1, importin alpha 1), isoform CRA_b [Homo sapiens]
GenBankAAI46906.1 Karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Homo sapiens]
ENSEMBLENSP00000345668Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1). [Homo sapiens]
ENSEMBLENSP00000332455Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1). [Homo sapiens]
EMBLCAC83080.1 
UCSCGenomeBrowserP52292 
ENSEMBLENSP00000332455 
ENSEMBLENSP00000345668 
ENSEMBLENSP00000345668TDI sequence
ENSEMBLENSP00000460119