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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link B2R536
Original Database ID sp Q12798
Organism Homo sapiens, synthetic construct
Annotation subname: full=centrin, ef-hand
protein, 1;subname: full=cdna,
flj92326, homo sap iens centrin,
ef-hand protein, 1 (cetn1), mrna;
Sequence Length 172

Dataset Information:

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Model Information

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Target Region25-172
Protein Length172
Template PDB Code5d43A
Template Region25-172
Sequence Identity95%
E-Value0
GA3411
MPQS2.08677
z-DOPE-1.86
TSVMod MethodMSALL
TSVMod RMSD1.219
TSVMod NO350.925
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB5d43
DBALI5d43A 
JenaImageLibrary5d43 
Target Sequence
UniProtKBQ12798RecName: Full=Centrin-1;AltName: Full=Caltractin isoform 2;
InterProQ12798 
PFAMQ12798 
ProdomQ12798 
UniProtKBB2R536RecName: Full=Centrin-1;AltName: Full=Caltractin isoform 2;
InterProB2R536 
PFAMB2R536 
ProdomB2R536 
UniProtKBA0A140VJG3SubName: Full=Testicular tissue protein Li 37 {ECO:0000313|EMBL:AEE60950.1}
InterProA0A140VJG3 
PFAMA0A140VJG3 
ProdomA0A140VJG3 
UniProtKBB2R536SubName: Full=Centrin, EF-hand protein, 1;SubName: Full=cDNA, FLJ92326, Homo sapiens centrin, EF-hand protein, 1 (CETN1), mRNA;
InterProB2R536 
PFAMB2R536 
ProdomB2R536 
UniProtKBQ12798.1CETN1_HUMAN RecName: Full=Centrin-1; AltName: Full=Caltractin isoform 2
InterProQ12798.1 
PFAMQ12798.1 
ProdomQ12798.1 
UniProtKBB2R536RecName: Full=Centrin-1;AltName: Full=Caltractin isoform 2;
InterProB2R536 
PFAMB2R536 
ProdomB2R536 
UniProtKBQ12798RecName: Full=Centrin-1;AltName: Full=Caltractin isoform 2;
InterProQ12798 
PFAMQ12798 
ProdomQ12798 
RefSeqNP_004057.1 centrin-1 [Homo sapiens]
GenPept7441467I38424 centrin - human
GenPept649099138CETN1, partial
GenPept568536471Sequence 28607 from patent US 8586006
GenPept4757974 centrin-1 [Homo sapiens]
GenPept414993centrin
GenPept123980134centrin, EF-hand protein, 1
GenPept123994937centrin, EF-hand protein, 1, partial
GenPept13646815 centrin 1 [Homo sapiens]
GenPept189065260unnamed protein product
GenPept20809602Centrin, EF-hand protein, 1
GenPept223088434Sequence 6450 from patent US 6812339
GenPept119622132centrin, EF-hand protein, 1
GenPept262270967unnamed protein product
GenPept261385255unnamed protein product
GenPept2493440CETN1_HUMAN RecName: Full=Centrin-1; AltName: Full=Caltractin isoform 2
GenBankABM85070.1 centrin, EF-hand protein, 1 [synthetic construct]
GenBankEAX01727.1 centrin, EF-hand protein, 1 [Homo sapiens]
GenBankAAC27343.1 centrin [Homo sapiens]
GenBankAAH29515.1 Centrin, EF-hand protein, 1 [Homo sapiens]
GenBankABM81896.1 centrin, EF-hand protein, 1 [synthetic construct]
ENSEMBLENSP00000319052Centrin 1 (Caltractin isoform 2). [Homo sapiens]
ENSEMBLENSP00000319052 
ENSEMBLENSP00000319052TDI sequence
ENSEMBLGENSCAN00000024470 
ENSEMBLENSP00000319052 
UCSCGenomeBrowserQ12798