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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link B5BU70
Original Database ID EN ENSP00000347379.2
Organism Homo sapiens
Annotation subname: full=occludin;
Sequence Length 522

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region416-522
Protein Length522
Template PDB Code1xawA
Template Region416-522
Sequence Identity99%
E-Value0
GA3411
MPQS1.51278
z-DOPE-2.28
TSVMod MethodMTALL
TSVMod RMSD0.904
TSVMod NO350.995
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1xawcrystal structure of the cytoplasmic distal c-terminal domain of occludin
DBALI1xawA 
JenaImageLibrary1xaw 
Target Sequence
UniProtKBQ8N6K1RecName: Full=Occludin;
InterProQ8N6K1 
PFAMQ8N6K1 
ProdomQ8N6K1 
UniProtKBB5BU70SubName: Full=Occludin;
InterProB5BU70 
PFAMB5BU70 
ProdomB5BU70 
UniProtKBQ8N6K1RecName: Full=Occludin;
InterProQ8N6K1 
PFAMQ8N6K1 
ProdomQ8N6K1 
UniProtKBQ16625.1OCLN_HUMAN RecName: Full=Occludin
InterProQ16625.1 
PFAMQ16625.1 
ProdomQ16625.1 
UniProtKBQ16625RecName: Full=Occludin;
InterProQ16625 
PFAMQ16625 
ProdomQ16625 
UniProtKBB5BU70RecName: Full=Occludin;
InterProB5BU70 
PFAMB5BU70 
ProdomB5BU70 
RefSeqNP_002529.1 occludin [Homo sapiens]
2210347B2210347B occludin
GenPept914957911Sequence 48 from patent US 8940960
GenPept7448832G02533 occludin - human
GenPept4505487 occludin [Homo sapiens]
GenPept430255450Sequence 104 from patent US 8323906
GenPept3914196OCLN_HUMAN RecName: Full=Occludin
GenPept1322282occludin
GenPept15891792210347B occludin
GenPept17864891occludin
GenPept197692313occludin
GenPept197692575occludin, partial
GenPept228183855Sequence 104 from patent US 7494775
GenPept27311041Sequence 2 from patent US 6489460
GenPept302912918Sequence 56 from patent US 7696343
GenPept31704112Sequence 2 from patent US 6559286
GenPept1276979occludin
GenBankAAL47094.1 occludin [Homo sapiens]
GenBankAAC50451.1 occludin [Homo sapiens]
GenBankAAB00195.1 occludin [Homo sapiens]
ENSEMBLENSP00000347379Occludin. [Homo sapiens]
ENSEMBLENSP00000349487Occludin. [Homo sapiens]
ENSEMBLENSP00000347379 
ENSEMBLENSP00000349487 
ENSEMBLENSP00000349487TDI sequence
ENSEMBLENSP00000347379 
UCSCGenomeBrowserQ16625