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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link C9JKB5
Original Database ID EN ENSP00000476948.1
Organism Homo sapiens
Annotation recname: full=putative rna polymerase
ii subunit b1 ctd phosphatase
rpap2;ec=3.1 .3.16;altname: full=rna
polymerase ii-associated protein
2;
Sequence Length 612

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region53-172
Protein Length612
Template PDB Code4m3oA
Template Region25-153
Sequence Identity33%
E-Value0.00000098
GA3410.58
MPQS0.471678
z-DOPE0.31
TSVMod MethodMSALL
TSVMod RMSD7.827
TSVMod NO350.381
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4m3o
DBALI4m3oA 
JenaImageLibrary4m3o 
Target Sequence
UniProtKBQ9H8Y2RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2;EC=3.1.3.16;AltName: Full=RNA polymerase II-associated protein 2;
InterProQ9H8Y2 
PFAMQ9H8Y2 
ProdomQ9H8Y2 
UniProtKBC9JKB5RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2;EC=3.1.3.16;AltName: Full=RNA polymerase II-associated protein 2;
InterProC9JKB5 
PFAMC9JKB5 
ProdomC9JKB5 
UniProtKBQ49AS7RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2;EC=3.1.3.16;AltName: Full=RNA polymerase II-associated protein 2;
InterProQ49AS7 
PFAMQ49AS7 
ProdomQ49AS7 
UniProtKBQ8IXW5RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2;EC=3.1.3.16;AltName: Full=RNA polymerase II-associated protein 2;
InterProQ8IXW5 
PFAMQ8IXW5 
ProdomQ8IXW5 
UniProtKBQ8IXW5C1orf82 protein (Novel protein) (FLJ13150)
InterProQ8IXW5 
PFAMQ8IXW5 
ProdomQ8IXW5 
UniProtKBQ8IXW5RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2;EC=3.1.3.16;AltName: Full=RNA polymerase II-associated protein 2;
InterProQ8IXW5 
PFAMQ8IXW5 
ProdomQ8IXW5 
UniProtKBQ49AS7RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2;EC=3.1.3.16;AltName: Full=RNA polymerase II-associated protein 2;
InterProQ49AS7 
PFAMQ49AS7 
ProdomQ49AS7 
UniProtKBQ8IXW5.1RPAP2_HUMAN RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2; AltName: Full=RNA polymerase II-associated protein 2
InterProQ8IXW5.1 
PFAMQ8IXW5.1 
ProdomQ8IXW5.1 
UniProtKBQ9H8Y2RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2;EC=3.1.3.16;AltName: Full=RNA polymerase II-associated protein 2;
InterProQ9H8Y2 
PFAMQ9H8Y2 
ProdomQ9H8Y2 
UniProtKBC9JKB5RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2;EC=3.1.3.16;AltName: Full=RNA polymerase II-associated protein 2;
InterProC9JKB5 
PFAMC9JKB5 
ProdomC9JKB5 
RefSeqNP_079089.2 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 [Homo sapiens]
PDB7B7UMPutative RNA polymerase II subunit B1 CTD phosphatase RPAP2
GenPept55664893RNA polymerase II associated protein 2
GenPept119593501chromosome 1 open reading frame 82, isoform CRA_a
GenPept226246608 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 [Homo sapiens]
GenPept24659229RNA polymerase II associated protein 2
GenPept74750745RPAP2_HUMAN RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2; AltName: Full=RNA polymerase II-associated protein 2
GenPept325463605RNA polymerase II associated protein 2, partial
GenBankEAW73095.1 chromosome 1 open reading frame 82, isoform CRA_a [Homo sapiens]
GenBankAAH39014.1 RNA polymerase II associated protein 2 [Homo sapiens]
ENSEMBLENSP00000263784Ensembl Family: AMBIGUOUS [Homo sapiens]
EMBLCAH70763.1 
ENSEMBLENSP00000263784 
ENSEMBLENSP00000263784TDI sequence
ENSEMBLENSP00000359368