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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A1L4L6
Original Database ID EN ENSP00000491657.1
Organism Gorilla gorilla gorilla, Pan troglodytes, etc.
Annotation subname: full=lim domain containing
preferred translocation partner
in lipoma;su bname: full=lim domain
containing preferred translocation
partner in ...
Sequence Length 612

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region468-537
Protein Length612
Template PDB Code2dloA
Template Region10-79
Sequence Identity73%
E-Value0
GA3411
MPQS0.845279
z-DOPE0.29
TSVMod MethodMTALL
TSVMod RMSD4.757
TSVMod NO350.895
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB2dlosolution structure of the second lim domain of human thyroid receptor-interacting protein 6
DBALI2dloA 
JenaImageLibrary2dlo 
Target Sequence
UniProtKBQ8NFX5RecName: Full=Lipoma-preferred partner;AltName: Full=LIM domain-containing preferred translocation partner in lipoma;
InterProQ8NFX5 
PFAMQ8NFX5 
ProdomQ8NFX5 
UniProtKBA1L4L6RecName: Full=Lipoma-preferred partner;AltName: Full=LIM domain-containing preferred translocation partner in lipoma;
InterProA1L4L6 
PFAMA1L4L6 
ProdomA1L4L6 
UniProtKBG3RKK7SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSGGOP00000016276};
InterProG3RKK7 
PFAMG3RKK7 
ProdomG3RKK7 
UniProtKBD3DNV6RecName: Full=Lipoma-preferred partner;AltName: Full=LIM domain-containing preferred translocation partner in lipoma;
InterProD3DNV6 
PFAMD3DNV6 
ProdomD3DNV6 
UniProtKBK7AYG5SubName: Full=LIM domain containing preferred translocation partner in lipoma {ECO:0000313|EMBL:JAA23036.1};
InterProK7AYG5 
PFAMK7AYG5 
ProdomK7AYG5 
UniProtKBQ93052RecName: Full=Lipoma-preferred partner;AltName: Full=LIM domain-containing preferred translocation partner in lipoma;
InterProQ93052 
PFAMQ93052 
ProdomQ93052 
UniProtKBA1L4L6SubName: Full=LIM domain containing preferred translocation partner in lipoma;SubName: Full=LIM domain containing preferred translocation partner in lipoma, isoform CRA_a;
InterProA1L4L6 
PFAMA1L4L6 
ProdomA1L4L6 
UniProtKBD3DNV6SubName: Full=LIM domain containing preferred translocation partner in lipoma, isoform CRA_a;
InterProD3DNV6 
PFAMD3DNV6 
ProdomD3DNV6 
UniProtKBQ93052LPP (LIM protein)
InterProQ93052 
PFAMQ93052 
ProdomQ93052 
UniProtKBG3RKK7SubName: Full=Uncharacterized protein;
InterProG3RKK7 
PFAMG3RKK7 
ProdomG3RKK7 
UniProtKBA1L4L6RecName: Full=Lipoma-preferred partner;AltName: Full=LIM domain-containing preferred translocation partner in lipoma;
InterProA1L4L6 
PFAMA1L4L6 
ProdomA1L4L6 
UniProtKBQ93052RecName: Full=Lipoma-preferred partner;AltName: Full=LIM domain-containing preferred translocation partner in lipoma;
InterProQ93052 
PFAMQ93052 
ProdomQ93052 
UniProtKBD3DNV6RecName: Full=Lipoma-preferred partner;AltName: Full=LIM domain-containing preferred translocation partner in lipoma;
InterProD3DNV6 
PFAMD3DNV6 
ProdomD3DNV6 
UniProtKBQ8NFX5RecName: Full=Lipoma-preferred partner;AltName: Full=LIM domain-containing preferred translocation partner in lipoma;
InterProQ8NFX5 
PFAMQ8NFX5 
ProdomQ8NFX5 
UniProtKBQ93052.1LPP_HUMAN RecName: Full=Lipoma-preferred partner; AltName: Full=LIM domain-containing preferred translocation partner in lipoma
InterProQ93052.1 
PFAMQ93052.1 
ProdomQ93052.1 
RefSeqNP_001374596.1lipoma-preferred partner isoform a
RefSeqNP_001362387.1lipoma-preferred partner isoform a
RefSeqNP_001362389.1lipoma-preferred partner isoform a
RefSeqNP_001362386.1lipoma-preferred partner isoform a
RefSeqNP_001362388.1lipoma-preferred partner isoform a
RefSeqNP_001362385.1lipoma-preferred partner isoform a
RefSeqNP_001362384.1lipoma-preferred partner isoform a
RefSeqNP_001161143.1 lipoma-preferred partner isoform a [Homo sapiens]
RefSeqNP_001362390.1lipoma-preferred partner isoform a
RefSeqNP_001362391.1lipoma-preferred partner isoform a
RefSeqNP_005569.1 lipoma-preferred partner isoform a [Homo sapiens]
RefSeqNP_001374603.1lipoma-preferred partner isoform a
RefSeqNP_001374602.1lipoma-preferred partner isoform a
RefSeqNP_001374601.1lipoma-preferred partner isoform a
RefSeqNP_001374600.1lipoma-preferred partner isoform a
RefSeqNP_001374599.1lipoma-preferred partner isoform a
RefSeqNP_001374598.1lipoma-preferred partner isoform a
RefSeqNP_001374597.1lipoma-preferred partner isoform a
RefSeqNP_001374595.1lipoma-preferred partner isoform a
RefSeqNP_001374594.1lipoma-preferred partner isoform a
RefSeqNP_001374593.1lipoma-preferred partner isoform a
RefSeqNP_001374592.1lipoma-preferred partner isoform a
RefSeqNP_001362394.1lipoma-preferred partner isoform a
RefSeqNP_001362393.1lipoma-preferred partner isoform a
RefSeqNP_001362392.1lipoma-preferred partner isoform a
RefSeqXP_024309287.1lipoma-preferred partner isoform X2
GenPept119598533LIM domain containing preferred translocation partner in lipoma, isoform CRA_a
GenPept2851884unnamed protein product
GenPept281036008Sequence 165 from patent US 7608413
GenPept281036007Sequence 164 from patent US 7608413
GenPept281036006Sequence 163 from patent US 7608413
GenPept281036005Sequence 162 from patent US 7608413
GenPept264681524 lipoma-preferred partner isoform a [Homo sapiens]
GenPept223088618Sequence 6634 from patent US 6812339
GenPept16073993unnamed protein product, partial
GenPept1537030LPP
GenPept1537017LIM protein
GenPept13647712 LIM domain-containing preferred translocation partner in lipoma [Homo sapiens]
GenPept120660434LIM domain containing preferred translocation partner in lipoma
GenPept119598539LIM domain containing preferred translocation partner in lipoma, isoform CRA_a
GenPept119598534LIM domain containing preferred translocation partner in lipoma, isoform CRA_a
GenPept344967356Sequence 162 from patent US 7998689
GenPept344967357Sequence 163 from patent US 7998689
GenPept261858132LIM domain containing preferred translocation partner in lipoma, partial
GenPept74751663LPP_HUMAN RecName: Full=Lipoma-preferred partner; AltName: Full=LIM domain-containing preferred translocation partner in lipoma
GenPept6092797unnamed protein product
GenPept568527366Sequence 1447 from patent US 8586006
GenPept5031887 lipoma-preferred partner isoform a [Homo sapiens]
GenPept48146265LPP
GenPept344967358Sequence 164 from patent US 7998689
GenPept344967359Sequence 165 from patent US 7998689
GenBankEAW78128.1 LIM domain containing preferred translocation partner in lipoma, isoform CRA_a [Homo sapiens]
GenBankEAW78127.1 LIM domain containing preferred translocation partner in lipoma, isoform CRA_a [Homo sapiens]
GenBankAAC50738.1 LIM protein [Homo sapiens]
GenBankAAI30585.1 LIM domain containing preferred translocation partner in lipoma [Homo sapiens]
GenBankAAC50739.1 LPP [Homo sapiens]
GenBankEAW78133.1 LIM domain containing preferred translocation partner in lipoma, isoform CRA_a [Homo sapiens]
ENSEMBLENSP00000318089LIM domain containing preferred translocation partner in lipoma [Homo sapiens]
EMBLCAG33355.1 
UCSCGenomeBrowserQ93052 
ENSEMBLENSP00000318089 
ENSEMBLENSP00000318089TDI sequence
ENSEMBLENSP00000318089