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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A024R7R0
Original Database ID EN ENSP00000366434.4
Organism Homo sapiens
Annotation subname: full=receptor associated
protein 80, isoform cra_c {eco:0000313|embl:ea
w85043.1};
Sequence Length 719

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region70-131
Protein Length719
Template PDB Code2mkgA
Template Region-3-131
Sequence Identity95%
E-Value0.0014
GA3411
MPQS1.08223
z-DOPE0.27
TSVMod MethodMSALL
TSVMod RMSD10.606
TSVMod NO350.109
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB2mkg
DBALI2mkgA 
JenaImageLibrary2mkg 
Target Sequence
UniProtKBQ9UHX7RecName: Full=BRCA1-A complex subunit RAP80;AltName: Full=Receptor-associated protein 80;AltName: Full=Retinoid X receptor-interacting protein 110;AltName: Full=Ubiquitin interaction motif-containing
InterProQ9UHX7 
PFAMQ9UHX7 
ProdomQ9UHX7 
UniProtKBA0A024R7R0SubName: Full=Receptor associated protein 80, isoform CRA_c {ECO:0000313|EMBL:EAW85043.1};
InterProA0A024R7R0 
PFAMA0A024R7R0 
ProdomA0A024R7R0 
UniProtKBQ9BZR5RecName: Full=BRCA1-A complex subunit RAP80;AltName: Full=Receptor-associated protein 80;AltName: Full=Retinoid X receptor-interacting protein 110;AltName: Full=Ubiquitin interaction motif-containing
InterProQ9BZR5 
PFAMQ9BZR5 
ProdomQ9BZR5 
UniProtKBQ7Z3W7Hypothetical protein DKFZp686C17196
InterProQ7Z3W7 
PFAMQ7Z3W7 
ProdomQ7Z3W7 
UniProtKBQ5XKQ1RecName: Full=Ubiquitin interaction motif-containing protein 1;AltName: Full=Retinoid X receptor-interacting protein 110;AltName: Full=Receptor-associated protein 80;AltName: Full=Nuclear zinc finger
InterProQ5XKQ1 
PFAMQ5XKQ1 
ProdomQ5XKQ1 
UniProtKBQ7Z3W7RecName: Full=Ubiquitin interaction motif-containing protein 1;AltName: Full=Retinoid X receptor-interacting protein 110;AltName: Full=Receptor-associated protein 80;AltName: Full=Nuclear zinc finger
InterProQ7Z3W7 
PFAMQ7Z3W7 
ProdomQ7Z3W7 
UniProtKBQ8N5B9RecName: Full=Ubiquitin interaction motif-containing protein 1;AltName: Full=Retinoid X receptor-interacting protein 110;AltName: Full=Receptor-associated protein 80;AltName: Full=Nuclear zinc finger
InterProQ8N5B9 
PFAMQ8N5B9 
ProdomQ8N5B9 
UniProtKBQ96RL1RecName: Full=Ubiquitin interaction motif-containing protein 1;AltName: Full=Retinoid X receptor-interacting protein 110;AltName: Full=Receptor-associated protein 80;AltName: Full=Nuclear zinc finger
InterProQ96RL1 
PFAMQ96RL1 
ProdomQ96RL1 
UniProtKBQ96RL1.2UIMC1_HUMAN RecName: Full=BRCA1-A complex subunit RAP80; AltName: Full=Receptor-associated protein 80; AltName: Full=Retinoid X receptor-interacting protein 110; AltName: Full=Ubiquitin interaction mo
InterProQ96RL1.2 
PFAMQ96RL1.2 
ProdomQ96RL1.2 
UniProtKBQ9BZR1RecName: Full=Ubiquitin interaction motif-containing protein 1;AltName: Full=Retinoid X receptor-interacting protein 110;AltName: Full=Receptor-associated protein 80;AltName: Full=Nuclear zinc finger
InterProQ9BZR1 
PFAMQ9BZR1 
ProdomQ9BZR1 
UniProtKBQ9BZR5RecName: Full=BRCA1-A complex subunit RAP80;AltName: Full=Receptor-associated protein 80;AltName: Full=Retinoid X receptor-interacting protein 110;AltName: Full=Ubiquitin interaction motif-containing
InterProQ9BZR5 
PFAMQ9BZR5 
ProdomQ9BZR5 
UniProtKBQ9UHX7RecName: Full=BRCA1-A complex subunit RAP80;AltName: Full=Receptor-associated protein 80;AltName: Full=Retinoid X receptor-interacting protein 110;AltName: Full=Ubiquitin interaction motif-containing
InterProQ9UHX7 
PFAMQ9UHX7 
ProdomQ9UHX7 
RefSeqNP_057374.3 BRCA1-A complex subunit RAP80 [Homo sapiens]
GenPept108250312unnamed protein product
GenPept31873254hypothetical protein
GenPept190689827ubiquitin interaction motif containing 1 protein, partial
GenPept42476130 BRCA1-A complex subunit RAP80 [Homo sapiens]
GenPept568536132Sequence 26622 from patent US 8586006
GenPept60390957UIMC1_HUMAN RecName: Full=BRCA1-A complex subunit RAP80; AltName: Full=Receptor-associated protein 80; AltName: Full=Retinoid X receptor-interacting protein 110; AltName: Full=Ubiquitin interaction mo
GenPept14781390 retinoid x receptor interacting protein [Homo sapiens]
GenPept14781388 retinoid x receptor interacting protein [Homo sapiens]
GenPept119605450receptor associated protein 80, isoform CRA_c
GenPept119605449receptor associated protein 80, isoform CRA_c
GenPept190691195ubiquitin interaction motif containing 1 protein
GenBankEAW85043.1 receptor associated protein 80, isoform CRA_c [Homo sapiens]
GenBankACE86688.1 ubiquitin interaction motif containing 1 protein [synthetic construct]
GenBankEAW85044.1 receptor associated protein 80, isoform CRA_c [Homo sapiens]
GenBankACE87372.1 ubiquitin interaction motif containing 1 protein [synthetic construct]
ENSEMBLENSP00000274827Retinoid X receptor interacting protein 110 (Receptor-associated protein 80) (Nuclear zinc finger protein RAP80). [Homo sapiens]
EMBLCAD97618.1 
ENSEMBLENSP00000274827 
ENSEMBLENSP00000274827TDI sequence
ENSEMBLENSP00000366434