University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A8K0S0
Original Database ID EN ENSP00000260210.3
Organism Homo sapiens, synthetic construct
Annotation subname: full=bud13 homolog (yeast),
isoform cra_a;subname: full=cdna
flj78694;
Sequence Length 619

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region109-264
Protein Length619
Template PDB Code5m6bC
Template Region386-555
Sequence Identity10%
E-Value0
GA3410.01
MPQS0.386819
z-DOPE-1.04
TSVMod MethodMSRED
TSVMod RMSD7.565
TSVMod NO350.448
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB5m6b
DBALI5m6bC 
JenaImageLibrary5m6b 
Target Sequence
UniProtKBQ9BRD0RecName: Full=BUD13 homolog;
InterProQ9BRD0 
PFAMQ9BRD0 
ProdomQ9BRD0 
UniProtKBQ96LS7RecName: Full=BUD13 homolog;
InterProQ96LS7 
PFAMQ96LS7 
ProdomQ96LS7 
UniProtKBA8K0S0RecName: Full=BUD13 homolog;
InterProA8K0S0 
PFAMA8K0S0 
ProdomA8K0S0 
UniProtKBA8K0S0SubName: Full=BUD13 homolog (Yeast), isoform CRA_a;SubName: Full=cDNA FLJ78694;
InterProA8K0S0 
PFAMA8K0S0 
ProdomA8K0S0 
UniProtKBQ9BRD0Protein BUD13 homolog
InterProQ9BRD0 
PFAMQ9BRD0 
ProdomQ9BRD0 
UniProtKBQ9BRD0RecName: Full=BUD13 homolog;
InterProQ9BRD0 
PFAMQ9BRD0 
ProdomQ9BRD0 
UniProtKBQ96LS7RecName: Full=BUD13 homolog;
InterProQ96LS7 
PFAMQ96LS7 
ProdomQ96LS7 
UniProtKBA8K0S0RecName: Full=BUD13 homolog;
InterProA8K0S0 
PFAMA8K0S0 
ProdomA8K0S0 
UniProtKBQ9BRD0.1BUD13_HUMAN RecName: Full=BUD13 homolog
InterProQ9BRD0.1 
PFAMQ9BRD0.1 
ProdomQ9BRD0.1 
RefSeqNP_116114.1 BUD13 homolog isoform 1 [Homo sapiens]
PDB5Z56ZBUD13 homolog
PDB5Z57ZBUD13 homolog
PDB6FF73BUD13 homolog
PDB6FF43BUD13 homolog
PDB5Z58ZBUD13 homolog
GenPept123998686BUD13 homolog (yeast), partial
GenPept123984687BUD13 homolog (yeast)
GenPept13623491BUD13 homolog (S. cerevisiae)
GenPept14249338 BUD13 homolog isoform 1 [Homo sapiens]
GenPept14774307 hypothetical protein MGC13125 [Homo sapiens]
GenPept119587669BUD13 homolog (yeast), isoform CRA_a
GenPept158260293unnamed protein product
GenPept74732865BUD13_HUMAN RecName: Full=BUD13 homolog
GenPept649128567BUD13, partial
GenBankEAW67265.1 BUD13 homolog (yeast), isoform CRA_a [Homo sapiens]
GenBankABM83689.1 BUD13 homolog (yeast) [synthetic construct]
GenBankAAH06350.1 BUD13 homolog (S. cerevisiae) [Homo sapiens]
GenBankABM86992.1 BUD13 homolog (yeast) [synthetic construct]
ENSEMBLENSP00000260210Ensembl Family: AMBIGUOUS [Homo sapiens]
UCSCGenomeBrowserQ9BRD0 
ENSEMBLENSP00000260210 
ENSEMBLENSP00000260210TDI sequence
ENSEMBLENSP00000260210