University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q9BUL8.1
Original Database ID EN ENSP00000417202.1
Organism Chrysemys picta bellii, Gorilla gorilla gorilla,
etc.
Annotation pdc10_human recname: full=programmed
cell death protein 10; altname:
full=cerebr al cavernous malformations
3 protein; altname: full=tf-1
cell apoptos ...
Sequence Length 212

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region1-210
Protein Length212
Template PDB Code3l8iC
Template Region1-210
Sequence Identity100%
E-Value0
GA3411
MPQS2.24417
z-DOPE-1.6
TSVMod MethodMSALL
TSVMod RMSD1.834
TSVMod NO350.955
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB3l8icrystal structure of ccm3, a cerebral cavernous malformation protein critical for vascular integrity
DBALI3l8iC 
JenaImageLibrary3l8i 
Target Sequence
UniProtKBD3DNN5RecName: Full=Programmed cell death protein 10;AltName: Full=Cerebral cavernous malformations 3 protein;AltName: Full=TF-1 cell apoptosis-related protein 15;
InterProD3DNN5 
PFAMD3DNN5 
ProdomD3DNN5 
UniProtKBQ9BUL8RecName: Full=Programmed cell death protein 10;AltName: Full=Cerebral cavernous malformations 3 protein;AltName: Full=TF-1 cell apoptosis-related protein 15;
InterProQ9BUL8 
PFAMQ9BUL8 
ProdomQ9BUL8 
UniProtKBO14811RecName: Full=Programmed cell death protein 10;AltName: Full=Cerebral cavernous malformations 3 protein;AltName: Full=TF-1 cell apoptosis-related protein 15;
InterProO14811 
PFAMO14811 
ProdomO14811 
UniProtKBA8K515RecName: Full=Programmed cell death protein 10;AltName: Full=Cerebral cavernous malformations 3 protein;AltName: Full=TF-1 cell apoptosis-related protein 15;
InterProA8K515 
PFAMA8K515 
ProdomA8K515 
UniProtKBH2QNP4SubName: Full=Programmed cell death 10 {ECO:0000313|EMBL:JAA09847.1};SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSPTRP00000026842};
InterProH2QNP4 
PFAMH2QNP4 
ProdomH2QNP4 
UniProtKBG3SFY9SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSGGOP00000027025};
InterProG3SFY9 
PFAMG3SFY9 
ProdomG3SFY9 
UniProtKBQ9BUL8Programmed cell death 10 (PDCD10 protein)
InterProQ9BUL8 
PFAMQ9BUL8 
ProdomQ9BUL8 
UniProtKBA0A452HIH0SubName: Full=Programmed cell death 10 {ECO:0000313|Ensembl:ENSGAGP00000014701}
InterProA0A452HIH0 
PFAMA0A452HIH0 
ProdomA0A452HIH0 
UniProtKBA0A2J8P1Q5SubName: Full=Programmed cell death 10 {ECO:0000313|EMBL:JAA09847.1, ECO:0000313|Ensembl:ENSPTRP00000026842}
InterProA0A2J8P1Q5 
PFAMA0A2J8P1Q5 
ProdomA0A2J8P1Q5 
UniProtKBA0A2J8WTV7SubName: Full=PDCD10 isoform 1 {ECO:0000313|EMBL:PNJ73205.1}SubName: Full=PDCD10 isoform 2 {ECO:0000313|EMBL:PNJ73206.1}SubName: Full=PDCD10 isoform 3 {ECO:0000313|EMBL:PNJ73207.1}SubName: Full=PDCD10
InterProA0A2J8WTV7 
PFAMA0A2J8WTV7 
ProdomA0A2J8WTV7 
UniProtKBA0A2R9AWY4SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSPPAP00000019514}
InterProA0A2R9AWY4 
PFAMA0A2R9AWY4 
ProdomA0A2R9AWY4 
UniProtKBA0A4D9EPY3SubName: Full=Programmed cell death protein 10 {ECO:0000313|EMBL:TFK11165.1}
InterProA0A4D9EPY3 
PFAMA0A4D9EPY3 
ProdomA0A4D9EPY3 
UniProtKBA0A674JSW9SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSTMTP00000024906}
InterProA0A674JSW9 
PFAMA0A674JSW9 
ProdomA0A674JSW9 
UniProtKBH2QNP4SubName: Full=Uncharacterized protein;
InterProH2QNP4 
PFAMH2QNP4 
ProdomH2QNP4 
UniProtKBA0A8C3HRV8SubName: Full=Programmed cell death 10 {ECO:0000313|Ensembl:ENSCPBP00000022548}
InterProA0A8C3HRV8 
PFAMA0A8C3HRV8 
ProdomA0A8C3HRV8 
UniProtKBA0A8C4VTF0SubName: Full=Programmed cell death 10 {ECO:0000313|Ensembl:ENSGEVP00005005840}
InterProA0A8C4VTF0 
PFAMA0A8C4VTF0 
ProdomA0A8C4VTF0 
UniProtKBA0A9D4AR71SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAH1165526.1}
InterProA0A9D4AR71 
PFAMA0A9D4AR71 
ProdomA0A9D4AR71 
UniProtKBA8K515SubName: Full=cDNA FLJ76047, highly similar to Homo sapiens programmed cell death 10 (PDCD10), transcript variant 1, mRNA;SubName: Full=Programmed cell death 10, isoform CRA_a;
InterProA8K515 
PFAMA8K515 
ProdomA8K515 
UniProtKBA0A6D2X379SubName: Full=PDCD10 isoform 1 {ECO:0000313|EMBL:PNI77941.1}SubName: Full=PDCD10 isoform 11 {ECO:0000313|EMBL:PNI77949.1}SubName: Full=PDCD10 isoform 2 {ECO:0000313|EMBL:PNI77942.1}SubName: Full=PDCD1
InterProA0A6D2X379 
PFAMA0A6D2X379 
ProdomA0A6D2X379 
UniProtKBG3SFY9SubName: Full=Uncharacterized protein;
InterProG3SFY9 
PFAMG3SFY9 
ProdomG3SFY9 
UniProtKBA8K515RecName: Full=Programmed cell death protein 10;AltName: Full=Cerebral cavernous malformations 3 protein;AltName: Full=TF-1 cell apoptosis-related protein 15;
InterProA8K515 
PFAMA8K515 
ProdomA8K515 
UniProtKBO14811RecName: Full=Programmed cell death protein 10;AltName: Full=Cerebral cavernous malformations 3 protein;AltName: Full=TF-1 cell apoptosis-related protein 15;
InterProO14811 
PFAMO14811 
ProdomO14811 
UniProtKBQ9BUL8RecName: Full=Programmed cell death protein 10;AltName: Full=Cerebral cavernous malformations 3 protein;AltName: Full=TF-1 cell apoptosis-related protein 15;
InterProQ9BUL8 
PFAMQ9BUL8 
ProdomQ9BUL8 
UniProtKBD3DNN5RecName: Full=Programmed cell death protein 10;AltName: Full=Cerebral cavernous malformations 3 protein;AltName: Full=TF-1 cell apoptosis-related protein 15;
InterProD3DNN5 
PFAMD3DNN5 
ProdomD3DNN5 
UniProtKBQ9BUL8.1PDC10_HUMAN RecName: Full=Programmed cell death protein 10; AltName: Full=Cerebral cavernous malformations 3 protein; AltName: Full=TF-1 cell apoptosis-related protein 15
InterProQ9BUL8.1 
PFAMQ9BUL8.1 
ProdomQ9BUL8.1 
RefSeqXP_024100873.1programmed cell death protein 10
RefSeqXP_024051363.1programmed cell death protein 10
RefSeqXP_024051364.1programmed cell death protein 10
RefSeqXP_034813586.1programmed cell death protein 10
RefSeqXP_024100869.1programmed cell death protein 10
RefSeqNP_009148.2 programmed cell death protein 10 [Homo sapiens]
RefSeqXP_024100870.1programmed cell death protein 10
RefSeqXP_024100871.1programmed cell death protein 10
RefSeqXP_024100872.1programmed cell death protein 10
RefSeqXP_027628351.1programmed cell death protein 10
RefSeqXP_023069274.1programmed cell death protein 10
RefSeqXP_027628353.1programmed cell death protein 10
RefSeqXP_027628352.1programmed cell death protein 10
RefSeqXP_001160531.1 PREDICTED: programmed cell death 10 isoform 7 [Pan troglodytes]
RefSeqXP_023069273.1programmed cell death protein 10
RefSeqXP_023069271.1programmed cell death protein 10
RefSeqXP_001160479.1 PREDICTED: programmed cell death 10 isoform 6 [Pan troglodytes]
RefSeqXP_001160574.1 PREDICTED: programmed cell death 10 isoform 8 [Pan troglodytes]
RefSeqXP_001160375.1 PREDICTED: programmed cell death 10 isoform 4 [Pan troglodytes]
RefSeqXP_001160327.1 PREDICTED: programmed cell death 10 isoform 3 [Pan troglodytes]
RefSeqXP_001160613.1 PREDICTED: programmed cell death 10 isoform 9 [Pan troglodytes]
RefSeqXP_001160668.1 PREDICTED: programmed cell death 10 isoform 10 [Pan troglodytes]
RefSeqXP_001160719.1 PREDICTED: programmed cell death 10 isoform 11 [Pan troglodytes]
RefSeqNP_665859.1 programmed cell death protein 10 [Homo sapiens]
RefSeqNP_665858.1 programmed cell death protein 10 [Homo sapiens]
RefSeqXP_001160758.1 PREDICTED: programmed cell death 10 isoform 12 [Pan troglodytes]
RefSeqXP_005299277.1programmed cell death protein 10
RefSeqXP_005299278.1programmed cell death protein 10
RefSeqXP_001160424.1 PREDICTED: programmed cell death 10 isoform 5 [Pan troglodytes]
RefSeqXP_007055569.1programmed cell death protein 10
RefSeqXP_023069270.1programmed cell death protein 10
RefSeqXP_034637914.1programmed cell death protein 10
RefSeqXP_034637913.1programmed cell death protein 10
RefSeqXP_034355942.1programmed cell death protein 10
RefSeqXP_006150353.1programmed cell death protein 10
RefSeqXP_039344074.1programmed cell death protein 10 isoform X1
RefSeqXP_039344073.1programmed cell death protein 10 isoform X1
RefSeqXP_034813587.1programmed cell death protein 10
RefSeqXP_027628354.1programmed cell death protein 10
RefSeqXP_027673678.1programmed cell death protein 10
RefSeqXP_030430420.1programmed cell death protein 10
RefSeqXP_030865596.1programmed cell death protein 10
RefSeqXP_030865597.1programmed cell death protein 10
RefSeqXP_039344072.1programmed cell death protein 10 isoform X1
RefSeqXP_024100874.1programmed cell death protein 10
RefSeqXP_030430421.1programmed cell death protein 10
GenPept119598983programmed cell death 10, isoform CRA_a
GenPept119598981programmed cell death 10, isoform CRA_a
GenPept119598980programmed cell death 10, isoform CRA_a
GenPept114590248 PREDICTED: programmed cell death protein 10 isoform 12 [Pan troglodytes]
GenPept119598982programmed cell death 10, isoform CRA_a
GenPept114590246 PREDICTED: programmed cell death protein 10 isoform 11 [Pan troglodytes]
GenPept114590242 PREDICTED: programmed cell death 10 isoform 9 [Pan troglodytes]
GenPept114590240 PREDICTED: programmed cell death protein 10 isoform 8 [Pan troglodytes]
GenPept114590238 PREDICTED: programmed cell death 10 isoform 7 [Pan troglodytes]
GenPept114590234 PREDICTED: programmed cell death protein 10 isoform 5 [Pan troglodytes]
GenPept114590232 PREDICTED: programmed cell death 10 isoform 4 [Pan troglodytes]
GenPept114590230 PREDICTED: programmed cell death 10 isoform 3 [Pan troglodytes]
GenPept119598984programmed cell death 10, isoform CRA_a
GenPept119598986programmed cell death 10, isoform CRA_a
GenPept119598987programmed cell death 10, isoform CRA_a
GenPept649106913PDCD10, partial
GenPept60813994programmed cell death 10
GenPept48146331PDCD10
GenPept363837794Sequence 28 from patent US 8071305
GenPept310898505unnamed protein product
GenPept307684514programmed cell death 10, partial
GenPept22538794 programmed cell death protein 10 [Homo sapiens]
GenPept22538792 programmed cell death protein 10 [Homo sapiens]
GenPept20127517 programmed cell death protein 10 [Homo sapiens]
GenPept16741006Programmed cell death 10
GenPept158255696unnamed protein product
GenPept12803371Programmed cell death 10
GenPept123998247programmed cell death 10, partial
GenPept123984232programmed cell death 10
ENSEMBLENSP00000264678 
ENSEMBLENSP00000308738 
ENSEMBLENSP00000338141 
ENSEMBLENSPTRP00000026840 
ENSEMBLENSPTRP00000026841 
ENSEMBLENSPTRP00000026842 
ENSEMBLENSP00000338141TDI sequence
ENSEMBLENSP00000376506 
UCSCGenomeBrowserENSPTRT00000029089.1