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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0JLM3
Original Database ID EN ENSP00000477799.1
Organism Pan paniscus, Homo sapiens
Annotation recname: full=pre-mrna-splicing
factor cwc25 homolog;altname:
full=coiled-coil d omain-containing
protein 49;altname: full=spliceosome-associated
prot ...
Sequence Length 425

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region63-228
Protein Length425
Template PDB Code3hdiA
Template Region227-405
Sequence Identity27%
E-Value0.029
GA3410.85
MPQS0.527288
z-DOPE0.5
TSVMod MethodMSALL
TSVMod RMSD8.386
TSVMod NO350.468
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3hdicrystal structure of bacillus halodurans metallo peptidase
DBALI3hdiA 
JenaImageLibrary3hdi 
Target Sequence
UniProtKBQ9NXE8RecName: Full=Pre-mRNA-splicing factor CWC25 homolog;AltName: Full=Coiled-coil domain-containing protein 49;AltName: Full=Spliceosome-associated protein homolog CWC25;
InterProQ9NXE8 
PFAMQ9NXE8 
ProdomQ9NXE8 
UniProtKBQ68DK5RecName: Full=Pre-mRNA-splicing factor CWC25 homolog;AltName: Full=Coiled-coil domain-containing protein 49;AltName: Full=Spliceosome-associated protein homolog CWC25;
InterProQ68DK5 
PFAMQ68DK5 
ProdomQ68DK5 
UniProtKBA0JLM3RecName: Full=Pre-mRNA-splicing factor CWC25 homolog;AltName: Full=Coiled-coil domain-containing protein 49;AltName: Full=Spliceosome-associated protein homolog CWC25;
InterProA0JLM3 
PFAMA0JLM3 
ProdomA0JLM3 
UniProtKBQ9NXE8Coiled-coil domain-containing protein 49
InterProQ9NXE8 
PFAMQ9NXE8 
ProdomQ9NXE8 
UniProtKBA0A2R8ZL90Cir_N domain-containing protein {ECO:0000259|SMART:SM01083}
InterProA0A2R8ZL90 
PFAMA0A2R8ZL90 
ProdomA0A2R8ZL90 
UniProtKBQ9NXE8.1CWC25_HUMAN RecName: Full=Pre-mRNA-splicing factor CWC25 homolog; AltName: Full=Coiled-coil domain-containing protein 49; AltName: Full=Spliceosome-associated protein homolog CWC25
InterProQ9NXE8.1 
PFAMQ9NXE8.1 
ProdomQ9NXE8.1 
UniProtKBQ9NXE8RecName: Full=Pre-mRNA-splicing factor CWC25 homolog;AltName: Full=Coiled-coil domain-containing protein 49;AltName: Full=Spliceosome-associated protein homolog CWC25;
InterProQ9NXE8 
PFAMQ9NXE8 
ProdomQ9NXE8 
UniProtKBQ68DK5RecName: Full=Pre-mRNA-splicing factor CWC25 homolog;AltName: Full=Coiled-coil domain-containing protein 49;AltName: Full=Spliceosome-associated protein homolog CWC25;
InterProQ68DK5 
PFAMQ68DK5 
ProdomQ68DK5 
UniProtKBA0JLM3RecName: Full=Pre-mRNA-splicing factor CWC25 homolog;AltName: Full=Coiled-coil domain-containing protein 49;AltName: Full=Spliceosome-associated protein homolog CWC25;
InterProA0JLM3 
PFAMA0JLM3 
ProdomA0JLM3 
RefSeqNP_060218.1 pre-mRNA-splicing factor CWC25 homolog [Homo sapiens]
PDB6ZYMtHuman C Complex Spliceosome - High-resolution CORE
GenPept12740016 hypothetical protein FLJ20291 [Homo sapiens]
GenPept14250728Coiled-coil domain containing 49
GenPept14769534 hypothetical protein FLJ20291 [Homo sapiens]
GenPept306921287coiled-coil domain containing 49, partial
GenPept8923271 pre-mRNA-splicing factor CWC25 homolog [Homo sapiens]
GenPept7020287unnamed protein product
GenPept74734693CWC25_HUMAN RecName: Full=Pre-mRNA-splicing factor CWC25 homolog; AltName: Full=Coiled-coil domain-containing protein 49; AltName: Full=Spliceosome-associated protein homolog CWC25
GenPept119580941coiled-coil domain containing 49
GenBankEAW60537.1 coiled-coil domain containing 49 [Homo sapiens]
GenBankAAH08833.1 Coiled-coil domain containing 49 [Homo sapiens]
UCSCGenomeBrowserQ9NXE8 
ENSEMBLENSP00000225428