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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q53ZR5
Original Database ID EN ENSP00000440970.1
Organism Homo sapiens
Annotation subname: full=sphingosine kinase
1;subname: full=sphingosine kinase
1, isoform c ra_a;subname: full=cdna
flj78254;
Sequence Length 384

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region7-363
Protein Length384
Template PDB Code4v24A
Template Region93-449
Sequence Identity100%
E-Value0
GA3411
MPQS2.14629
z-DOPE-1.36
TSVMod MethodMSALL
TSVMod RMSD0.472
TSVMod NO350.968
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB4v24
DBALI4v24A 
JenaImageLibrary4v24 
Target Sequence
UniProtKBQ9NYL3RecName: Full=Sphingosine kinase 1;Short=SK 1;Short=SPK 1;EC=2.7.1.91;
InterProQ9NYL3 
PFAMQ9NYL3 
ProdomQ9NYL3 
UniProtKBQ53ZR5SubName: Full=Sphingosine kinase 1 {ECO:0000313|EMBL:AAP35060.1};SubName: Full=Sphingosine kinase 1, isoform CRA_a {ECO:0000313|EMBL:EAW89388.1};SubName: Full=cDNA FLJ78254 {ECO:0000313|EMBL:BAF85303.
InterProQ53ZR5 
PFAMQ53ZR5 
ProdomQ53ZR5 
UniProtKBQ9NYA1RecName: Full=Sphingosine kinase 1;Short=SK 1;Short=SPK 1;EC=2.7.1.91;
InterProQ9NYA1 
PFAMQ9NYA1 
ProdomQ9NYA1 
UniProtKBQ9NY70RecName: Full=Sphingosine kinase 1;Short=SK 1;Short=SPK 1;EC=2.7.1.91;
InterProQ9NY70 
PFAMQ9NY70 
ProdomQ9NY70 
UniProtKBQ8N632RecName: Full=Sphingosine kinase 1;Short=SK 1;Short=SPK 1;EC=2.7.1.91;
InterProQ8N632 
PFAMQ8N632 
ProdomQ8N632 
UniProtKBQ9HD92RecName: Full=Sphingosine kinase 1;Short=SK 1;Short=SPK 1;EC=2.7.1.91;
InterProQ9HD92 
PFAMQ9HD92 
ProdomQ9HD92 
UniProtKBQ53ZR5SubName: Full=Sphingosine kinase 1;SubName: Full=Sphingosine kinase 1, isoform CRA_a;SubName: Full=cDNA FLJ78254;
InterProQ53ZR5 
PFAMQ53ZR5 
ProdomQ53ZR5 
UniProtKBQ8N632RecName: Full=Sphingosine kinase 1;Short=SK 1;Short=SPK 1;EC=2.7.1.91;
InterProQ8N632 
PFAMQ8N632 
ProdomQ8N632 
UniProtKBQ96GK1RecName: Full=Sphingosine kinase 1;Short=SK 1;Short=SPK 1;EC=2.7.1.91;
InterProQ96GK1 
PFAMQ96GK1 
ProdomQ96GK1 
UniProtKBQ9HD92RecName: Full=Sphingosine kinase 1;Short=SK 1;Short=SPK 1;EC=2.7.1.91;
InterProQ9HD92 
PFAMQ9HD92 
ProdomQ9HD92 
UniProtKBQ9NY70RecName: Full=Sphingosine kinase 1;Short=SK 1;Short=SPK 1;EC=2.7.1.91;
InterProQ9NY70 
PFAMQ9NY70 
ProdomQ9NY70 
UniProtKBQ9NYA1RecName: Full=Sphingosine kinase 1;Short=SK 1;Short=SPK 1;EC=2.7.1.91;
InterProQ9NYA1 
PFAMQ9NYA1 
ProdomQ9NYA1 
UniProtKBQ9NYA1.1SPHK1_HUMAN RecName: Full=Sphingosine kinase 1; Short=SK 1; Short=SPK 1
InterProQ9NYA1.1 
PFAMQ9NYA1.1 
ProdomQ9NYA1.1 
UniProtKBQ9NYL3RecName: Full=Sphingosine kinase 1;Short=SK 1;Short=SPK 1;EC=2.7.1.91;
InterProQ9NYL3 
PFAMQ9NYL3 
ProdomQ9NYL3 
RefSeqNP_001342068.1sphingosine kinase 1 isoform 3
RefSeqNP_001136073.1 sphingosine kinase 1 isoform 3 [Homo sapiens]
RefSeqNP_001136074.1 sphingosine kinase 1 isoform 3 [Homo sapiens]
GenPept119609797sphingosine kinase 1, isoform CRA_a
GenPept40035225unnamed protein product
GenPept10433791unnamed protein product
GenPept17369329SPHK1_HUMAN RecName: Full=Sphingosine kinase 1; Short=SK 1; Short=SPK 1
GenPept158258665unnamed protein product
GenPept14769225 sphingosine kinase 1 [Homo sapiens]
GenPept14769209 sphingosine kinase 1 [Homo sapiens]
GenPept14769188 sphingosine kinase 1 [Homo sapiens]
GenPept119609800sphingosine kinase 1, isoform CRA_a
GenPept119609796sphingosine kinase 1, isoform CRA_a
GenPept119609795sphingosine kinase 1, isoform CRA_a
GenPept119609794sphingosine kinase 1, isoform CRA_a
GenPept10435312unnamed protein product
GenPept217272883 sphingosine kinase 1 isoform 3 [Homo sapiens]
GenPept217272885 sphingosine kinase 1 isoform 3 [Homo sapiens]
GenPept30842086sphingosine kinase 1
GenPept40033828unnamed protein product
GenPept40091524Sequence 2 from patent US 6610534
GenPept8133100AF266756_1 sphingosine kinase
GenBankAAP35060.1 sphingosine kinase 1 [Homo sapiens]
GenBankEAW89389.1 sphingosine kinase 1, isoform CRA_a [Homo sapiens]
GenBankEAW89390.1 sphingosine kinase 1, isoform CRA_a [Homo sapiens]
GenBankEAW89391.1 sphingosine kinase 1, isoform CRA_a [Homo sapiens]
GenBankEAW89394.1 sphingosine kinase 1, isoform CRA_a [Homo sapiens]
GenBankEAW89388.1 sphingosine kinase 1, isoform CRA_a [Homo sapiens]
GenBankAAF73470.1AF266756_1 sphingosine kinase [Homo sapiens]
UCSCGenomeBrowserQ9NYA1 
ENSEMBLENSP00000440970