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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link Q9UKM9
Original Database ID EN ENSP00000246194.3
Organism Homo sapiens
Annotation recname: full=rna-binding protein
raly;altname: full=autoantigen
p542;altname: f ull=heterogeneous
nuclear ribonucleoprotein c-like
2;short=hnrnp core ...
Sequence Length 306

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region1-101
Protein Length306
Template PDB Code1wf1A
Template Region8-108
Sequence Identity96%
E-Value0
GA3411
MPQS1.43307
z-DOPE-0.62
TSVMod MethodMTALL
TSVMod RMSD8.518
TSVMod NO350.932
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1wf1solution structure of rrm domain in rna-binding protein np_057951
DBALI1wf1A 
JenaImageLibrary1wf1 
Target Sequence
UniProtKBQ9BQX6RecName: Full=RNA-binding protein Raly;AltName: Full=Autoantigen p542;AltName: Full=Heterogeneous nuclear ribonucleoprotein C-like 2;Short=hnRNP core protein C-like 2;AltName: Full=hnRNP associated wi
InterProQ9BQX6 
PFAMQ9BQX6 
ProdomQ9BQX6 
UniProtKBQ14621RecName: Full=RNA-binding protein Raly;AltName: Full=Autoantigen p542;AltName: Full=Heterogeneous nuclear ribonucleoprotein C-like 2;Short=hnRNP core protein C-like 2;AltName: Full=hnRNP associated wi
InterProQ14621 
PFAMQ14621 
ProdomQ14621 
UniProtKBQ2M365RecName: Full=RNA-binding protein Raly;AltName: Full=Autoantigen p542;AltName: Full=Heterogeneous nuclear ribonucleoprotein C-like 2;Short=hnRNP core protein C-like 2;AltName: Full=hnRNP associated wi
InterProQ2M365 
PFAMQ2M365 
ProdomQ2M365 
UniProtKBQ9UKM9RecName: Full=RNA-binding protein Raly;AltName: Full=Autoantigen p542;AltName: Full=Heterogeneous nuclear ribonucleoprotein C-like 2;Short=hnRNP core protein C-like 2;AltName: Full=hnRNP associated wi
InterProQ9UKM9 
PFAMQ9UKM9 
ProdomQ9UKM9 
UniProtKBQ5QPL8RecName: Full=RNA-binding protein Raly;AltName: Full=Autoantigen p542;AltName: Full=Heterogeneous nuclear ribonucleoprotein C-like 2;Short=hnRNP core protein C-like 2;AltName: Full=hnRNP associated wi
InterProQ5QPL8 
PFAMQ5QPL8 
ProdomQ5QPL8 
UniProtKBQ9UJE3RecName: Full=RNA-binding protein Raly;AltName: Full=Autoantigen p542;AltName: Full=Heterogeneous nuclear ribonucleoprotein C-like 2;Short=hnRNP core protein C-like 2;AltName: Full=hnRNP associated wi
InterProQ9UJE3 
PFAMQ9UJE3 
ProdomQ9UJE3 
UniProtKBQ5QPL8OTTHUMP00000030674
InterProQ5QPL8 
PFAMQ5QPL8 
ProdomQ5QPL8 
UniProtKBQ2M365RNA binding protein (Autoantigenic, hnRNP-associated with lethalDE yellow), long isoform
InterProQ2M365 
PFAMQ2M365 
ProdomQ2M365 
UniProtKBQ9UJE3RecName: Full=RNA-binding protein Raly;AltName: Full=Autoantigen p542;AltName: Full=Heterogeneous nuclear ribonucleoprotein C-like 2;Short=hnRNP core protein C-like 2;AltName: Full=hnRNP associated wi
InterProQ9UJE3 
PFAMQ9UJE3 
ProdomQ9UJE3 
UniProtKBQ9BQX6RecName: Full=RNA-binding protein Raly;AltName: Full=Autoantigen p542;AltName: Full=Heterogeneous nuclear ribonucleoprotein C-like 2;Short=hnRNP core protein C-like 2;AltName: Full=hnRNP associated wi
InterProQ9BQX6 
PFAMQ9BQX6 
ProdomQ9BQX6 
UniProtKBQ9UKM9RecName: Full=RNA-binding protein Raly;AltName: Full=Autoantigen p542;AltName: Full=Heterogeneous nuclear ribonucleoprotein C-like 2;Short=hnRNP core protein C-like 2;AltName: Full=hnRNP associated wi
InterProQ9UKM9 
PFAMQ9UKM9 
ProdomQ9UKM9 
UniProtKBQ5QPL8RecName: Full=RNA-binding protein Raly;AltName: Full=Autoantigen p542;AltName: Full=Heterogeneous nuclear ribonucleoprotein C-like 2;Short=hnRNP core protein C-like 2;AltName: Full=hnRNP associated wi
InterProQ5QPL8 
PFAMQ5QPL8 
ProdomQ5QPL8 
UniProtKBQ9UKM9.1RALY_HUMAN RecName: Full=RNA-binding protein Raly; AltName: Full=Autoantigen p542; AltName: Full=Heterogeneous nuclear ribonucleoprotein C-like 2; Short=hnRNP core protein C-like 2; AltName: Full=hnRN
InterProQ9UKM9.1 
PFAMQ9UKM9.1 
ProdomQ9UKM9.1 
UniProtKBQ14621RecName: Full=RNA-binding protein Raly;AltName: Full=Autoantigen p542;AltName: Full=Heterogeneous nuclear ribonucleoprotein C-like 2;Short=hnRNP core protein C-like 2;AltName: Full=hnRNP associated wi
InterProQ14621 
PFAMQ14621 
ProdomQ14621 
UniProtKBQ2M365RecName: Full=RNA-binding protein Raly;AltName: Full=Autoantigen p542;AltName: Full=Heterogeneous nuclear ribonucleoprotein C-like 2;Short=hnRNP core protein C-like 2;AltName: Full=hnRNP associated wi
InterProQ2M365 
PFAMQ2M365 
ProdomQ2M365 
RefSeqXP_024307625.1RNA-binding protein Raly isoform X1
RefSeqXP_024307626.1RNA-binding protein Raly isoform X1
RefSeqXP_024307627.1RNA-binding protein Raly isoform X1
RefSeqNP_057951.1 RNA-binding protein Raly long isoform [Homo sapiens]
GenPept25091115RALY_HUMAN RecName: Full=RNA-binding protein Raly; AltName: Full=Autoantigen p542; AltName: Full=Heterogeneous nuclear ribonucleoprotein C-like 2; Short=hnRNP core protein C-like 2; AltName: Full=hnRN
GenPept261859288RNA binding protein, autoantigenic, partial
GenPept331631129Sequence 1299 from patent US 7919467
GenPept430384293Sequence 23 from patent US 8329399
GenPept56203190RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))
GenPept6164674AF148457_1 heterogeneous nuclear ribonucleoprotein, alternate transcript
GenPept8051631 RNA-binding protein Raly long isoform [Homo sapiens]
GenPept85397886RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))
GenPept13653512 RNA-binding protein (autoantigenic) long isoform [Homo sapiens]
GenBankAAF04487.1AF148457_1 heterogeneous nuclear ribonucleoprotein, alternate transcript [Homo sapiens]
GenBankAAI05019.1 RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)) [Homo sapiens]
ENSEMBLENSP00000246194RNA-binding protein Raly (hnRNP associated with lethal yellow homolog) (Autoantigen p542). [Homo sapiens]
EMBLCAI22150.1 
UCSCGenomeBrowserQ9UKM9 
ENSEMBLENSP00000246194 
ENSEMBLENSP00000246194TDI sequence
ENSEMBLENSP00000246194