University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Overview

Go to Sequence Overview
Search Summary
Search Input:database_id: Q9Y5B0
 
Perform Action on Selected Model(s) : 103 matches found.
[HITS 1-50] Next models
TARGETMODEL DATATEMPLATE
Model
Icon
Model/Fold
Reliability
Sequence
Database
Link
Database AnnotationOrganismProtein
Size
Modeled
Segment
SizeSeq
Id(%)
PDB
code
PDB
Segment
PDB Comment
119587035ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1, isoform cra_d
Homo sapiens867168-355188423ef0A150-417the structure of fcp1,
an essential rna polymerase
ii ctd phosphatase
Q9Y5B0.2ctdp1_human recname: full=rna
polymerase ii subunit a c-terminal
domain phosphat ase; altname:
full=tfiif-associating ctd
phosphatase
Homo sapiens961167-325159201ta0A77-229three-dimensional structure
of a rna-polymerase
ii binding protein with
associated ligand.
Q9Y5B0.2ctdp1_human recname: full=rna
polymerase ii subunit a c-terminal
domain phosphat ase; altname:
full=tfiif-associating ctd
phosphatase
Homo sapiens961626-821196131kzyC1721-1935crystal structure of
the 53bp1 brct region
complexed to tumor suppressor
p53
39645774ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1
Homo sapiens86717-11296191k8mA2-79solution structure of
the lipoic acid-bearing
domain of the e2 component
of human, mitochondrial
branched-chain alpha-ketoacid
dehydrogenase
39645774ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1
Homo sapiens867174-330157202q5eA93-241crystal structure of
human carboxy-terminal
domain rna polymerase
ii polypeptide a small
phosphatase 2
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961172-324153232hhlA18-167crystal structure of
the human small ctd
phosphatase 3 isoform
1
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961602-91331282x0cA1353-1658structure of the talin
rod residues 1359-1659
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961864-96097295hmoA811-901
119587035ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1, isoform cra_d
Homo sapiens867182-320139292hhlA28-163crystal structure of
the human small ctd
phosphatase 3 isoform
1
119587035ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1, isoform cra_d
Homo sapiens867627-748122262d8mA16-129solution structure of
the first brct domain
of dna-repair protein
xrcc1
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961168-728561333ef0A150-579the structure of fcp1,
an essential rna polymerase
ii ctd phosphatase
Q9Y5B0.2ctdp1_human recname: full=rna
polymerase ii subunit a c-terminal
domain phosphat ase; altname:
full=tfiif-associating ctd
phosphatase
Homo sapiens961592-728137111t15A1718-1855crystal structure of
the brca1 brct domains
in complex with the
phosphorylated interacting
region from bach1 helicase
Q9Y5B0rna polymerase ii ctd phosphataseHomo sapiens961639-824186161gzhD1727-1938crystal structure of
the brct domains of
human 53bp1 bound to
the p53 tumor supressor
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961631-732102213pa6A3-97
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961627-740114272d8mA16-118solution structure of
the first brct domain
of dna-repair protein
xrcc1
39645774ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1
Homo sapiens867159-346188212hhlA7-184crystal structure of
the human small ctd
phosphatase 3 isoform
1
39645774ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1
Homo sapiens867172-324153232hhlA18-167crystal structure of
the human small ctd
phosphatase 3 isoform
1
Q9Y5B0.2ctdp1_human recname: full=rna
polymerase ii subunit a c-terminal
domain phosphat ase; altname:
full=tfiif-associating ctd
phosphatase
Homo sapiens96118-11295191pmr1-77lipoyl domain from the
dihydrolipoyl succinyltransferase
component of the 2-oxoglutarate
dehydrogenase multienzyme
complex of escherichia
coli, nmr, 25 structures
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961174-320147192q5eA93-236crystal structure of
human carboxy-terminal
domain rna polymerase
ii polypeptide a small
phosphatase 2
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961161-337177242hhlA9-171crystal structure of
the human small ctd
phosphatase 3 isoform
1
39645774ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1
Homo sapiens86717-11296191k8mA2-79solution structure of
the lipoic acid-bearing
domain of the e2 component
of human, mitochondrial
branched-chain alpha-ketoacid
dehydrogenase
39645774ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1
Homo sapiens867600-732133161wf6A11-130the third brca1 c-terminus
(brct) domain of similar
to s.pombe rad4+/cut5+
product
119587035ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1, isoform cra_d
Homo sapiens867632-733102233pd7A903-996
39645774ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1
Homo sapiens86714-11198221dczA47-122biotin carboxyl carrier
domain of transcarboxylase
(tc 1.3s)
Q9Y5B0.2ctdp1_human recname: full=rna
polymerase ii subunit a c-terminal
domain phosphat ase; altname:
full=tfiif-associating ctd
phosphatase
Homo sapiens961172-324153232hhlA18-167crystal structure of
the human small ctd
phosphatase 3 isoform
1
Q9Y5B0rna polymerase ii ctd phosphataseHomo sapiens961174-320147192q5eA93-236crystal structure of
human carboxy-terminal
domain rna polymerase
ii polypeptide a small
phosphatase 2
39645774ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1
Homo sapiens867481-57696141dgsA429-523crystal structure of
nad+-dependent dna ligase
from t. filiformis
39645774ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1
Homo sapiens867172-351180201ta0A80-254three-dimensional structure
of a rna-polymerase
ii binding protein with
associated ligand.
39645774ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1
Homo sapiens86721-11696231lab3-80three-dimensional structure
of the lipoyl domain
from bacillus stearothermophilus
pyruvate dehydrogenase
multienzyme complex
Q9Y5B0.2ctdp1_human recname: full=rna
polymerase ii subunit a c-terminal
domain phosphat ase; altname:
full=tfiif-associating ctd
phosphatase
Homo sapiens961171-353183192ghtA79-256ctd-specific phosphatase
scp1 in complex with
peptide from c-terminal
domain of rna polymerase
ii
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961627-740114272d8mA16-118solution structure of
the first brct domain
of dna-repair protein
xrcc1
Q9Y5B0.2ctdp1_human recname: full=rna
polymerase ii subunit a c-terminal
domain phosphat ase; altname:
full=tfiif-associating ctd
phosphatase
Homo sapiens96114-11198221dczA47-122biotin carboxyl carrier
domain of transcarboxylase
(tc 1.3s)
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961182-320139292hhlA28-163crystal structure of
the human small ctd
phosphatase 3 isoform
1
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961624-860237133t7kA824-1061
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961175-320146223l0bA82-225crystal structure of
scp1 phosphatase d206a
mutant phosphoryl-intermediate
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961168-355188423ef0A150-417the structure of fcp1,
an essential rna polymerase
ii ctd phosphatase
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961184-313130273l0bA91-217crystal structure of
scp1 phosphatase d206a
mutant phosphoryl-intermediate
Q9Y5B0.2ctdp1_human recname: full=rna
polymerase ii subunit a c-terminal
domain phosphat ase; altname:
full=tfiif-associating ctd
phosphatase
Homo sapiens961708-960253101c1gA5-256crystal structure of
tropomyosin at 7 angstroms
resolution in the spermine-induced
crystal form
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961630-729100192ebwA45-132solution structure of
the brct domain from
human dna repair protein
rev1
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961627-740114272d8mA16-118solution structure of
the first brct domain
of dna-repair protein
xrcc1
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961170-314145211ta0A78-218three-dimensional structure
of a rna-polymerase
ii binding protein with
associated ligand.
119587035ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1, isoform cra_d
Homo sapiens867182-313132272ghtA90-217ctd-specific phosphatase
scp1 in complex with
peptide from c-terminal
domain of rna polymerase
ii
119587035ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1, isoform cra_d
Homo sapiens86710-112103312dn8A12-85solution structure of
rsgi ruh-053, an apo-biotin
carboxy carrier protein
from human transcarboxylase
39645774ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1
Homo sapiens86718-11295191pmr1-77lipoyl domain from the
dihydrolipoyl succinyltransferase
component of the 2-oxoglutarate
dehydrogenase multienzyme
complex of escherichia
coli, nmr, 25 structures
39645774ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1
Homo sapiens867168-344177443ef0A150-406the structure of fcp1,
an essential rna polymerase
ii ctd phosphatase
39645774ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1
Homo sapiens867175-324150221ta0A82-229three-dimensional structure
of a rna-polymerase
ii binding protein with
associated ligand.
119587035ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1, isoform cra_d
Homo sapiens867171-349179202ghtA79-252ctd-specific phosphatase
scp1 in complex with
peptide from c-terminal
domain of rna polymerase
ii
39645774ctd (carboxy-terminal domain,
rna polymerase ii, polypeptide
a) phosphatase, sub unit
1
Homo sapiens8673-111109231o78A1-83biotin carboxyl carrier
domain of transcarboxylase
(1.3s) [10-48] deletion
mutant
A8MY97recname: full=rna polymerase
ii subunit a c-terminal domain
phosphatase;ec=3.1.3 .16;altname:
full=tfiif-associating ctd
phosphatase;
Homo sapiens961182-313132272ghtA90-217ctd-specific phosphatase
scp1 in complex with
peptide from c-terminal
domain of rna polymerase
ii
Q9Y5B0.2ctdp1_human recname: full=rna
polymerase ii subunit a c-terminal
domain phosphat ase; altname:
full=tfiif-associating ctd
phosphatase
Homo sapiens961629-820192141kzyC1724-1934crystal structure of
the 53bp1 brct region
complexed to tumor suppressor
p53