University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Overview

Go to Sequence Overview
Search Summary
 
Perform Action on Selected Model(s) : 228 matches found.
[HITS 1-50] Next models
TARGETMODEL DATATEMPLATE
Model
Icon
Model/Fold
Reliability
Sequence
Database
Link
Database AnnotationOrganismProtein
Size
Modeled
Segment
SizeSeq
Id(%)
PDB
code
PDB
Segment
PDB Comment
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4612-454453132p9bA13-449crystal structure of
putative prolidase from
bifidobacterium longum
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4651-462462121ejxC1062-1513crystal structure of
wild-type klebsiella
aerogenes urease at
100k
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-458458151a5lC66-513k217c variant of klebsiella
aerogenes urease
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4613-458456144ubpC69-516structure of bacillus
pasteurii urease inhibited
with acetohydroxamic
acid at 1.55 a resolution
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4614-396393141o12A2-346crystal structure of
n-acetylglucosamine-6-phosphate
deacetylase (tm0814)
from thermotoga maritima
at 2.5 a resolution
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-456456381nfgA1-455structure of d-hydantoinase
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-397397141onwA8-362crystal structure of
isoaspartyl dipeptidase
from e. coli
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4657-406400121o12A1-353crystal structure of
n-acetylglucosamine-6-phosphate
deacetylase (tm0814)
from thermotoga maritima
at 2.5 a resolution
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-428428131onxA8-389crystal structure of
isoaspartyl dipeptidase
from escherichia coli
complexed with aspartate
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4613-439437153be7A6-400crystal structure of
zn-dependent arginine
carboxypeptidase
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-446446151po9A8-386crytsal structure of
isoaspartyl dipeptidase
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
46156-374319141bf6A9-291phosphotriesterase homology
protein from escherichia
coli
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4613-453451111r9yA6-422bacterial cytosine deaminase
d314a mutant.
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4612-397396131UN7A4-374
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4613-436434122i9uA11-427crystal structure of
guanine deaminase from
c. acetobutylicum with
bound guanine in the
active site
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4612-436435112oodA5-464crystal structure of
guanine deaminase from
bradyrhizobium japonicum
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4651-462462131fweC62-513klebsiella aerogenes
urease, c319a variant
with acetohydroxamic
acid (aha) bound
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4654-462459144ubpC66-516structure of bacillus
pasteurii urease inhibited
with acetohydroxamic
acid at 1.55 a resolution
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4656-457452101K6WA5-422the structure of escherichia
coli cytosine deaminase
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
46156-374319141bf6A11-291phosphotriesterase homology
protein from escherichia
coli
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
46111-390380101ndwA16-349crystal structure of
adenosine deaminase
complexed with fr221647
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4612-396395132qs8A8-388crystal structure of
a xaa-pro dipeptidase
with bound methionine
in the active site
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-458458151a5nC66-513k217a variant of klebsiella
aerogenes urease, chemically
rescued by formate and
nickel
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-458458131ejxC1066-1513crystal structure of
wild-type klebsiella
aerogenes urease at
100k
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4657-460454361gkpA3-457d-hydantoinase (dihydropyrimidinase)
from thermus sp. in
space group c2221
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
46144-381338141hzyA40-364high resolution structure
of the zinc-containing
phosphotriesterase from
pseudomonas diminuta
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4613-9795343nqbA34-125crystal structure of
adenine deaminase from
agrobacterium tumefaciens
(str. c 58)
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4612-453452291gkrA3-451l-hydantoinase (dihydropyrimidinase)
from arthrobacter aurescens
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4656-401396131UN7A4-374
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4613-402400162r8cA4-389crystal structure of
uncharacterized protein
eaj56179
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4614-418415132oofA8-402the crystal structure
of 4-imidazolone-5-propanoate
amidohydrolase from
environmental sample
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4657-440434152icsA7-370crystal structure of
an adenine deaminase
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-458458391nfgA1-457structure of d-hydantoinase
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4613-450448111ra0A6-419bacterial cytosine deaminase
d314g mutant bound to
5-fluoro-4-(s)-hydroxy-3,4-dihydropyrimidine.
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4656-453448101ra0A5-418bacterial cytosine deaminase
d314g mutant bound to
5-fluoro-4-(s)-hydroxy-3,4-dihydropyrimidine.
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-458458121ejxC1066-1513crystal structure of
wild-type klebsiella
aerogenes urease at
100k
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4612-458457411ynyA2-460molecular structure
of d-hydantoinase from
a bacillus sp. ar9:
evidence for mercury
inhibition
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-435435172icsA5-369crystal structure of
an adenine deaminase
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4614-396393151ymyA3-365crystal structure of
the n-acetylglucosamine-6-phosphate
deacetylase from escherichia
coli k12
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
46142-396355123ovgA11-347
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-446446141onwA8-386crystal structure of
isoaspartyl dipeptidase
from e. coli
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4656-454449101k70A5-419the structure of escherichia
coli cytosine deaminase
bound to 4-hydroxy-3,4-dihydro-1h-pyrimidin-2-one
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
46128-380353121i0dA37-364high resolution structure
of the zinc/cadmium-containing
phosphotriesterase from
pseudomonas diminuta
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4614-397394151ymyA3-366crystal structure of
the n-acetylglucosamine-6-phosphate
deacetylase from escherichia
coli k12
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4651-432432131onxA4-389crystal structure of
isoaspartyl dipeptidase
from escherichia coli
complexed with aspartate
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4612-43643592i9uA10-427crystal structure of
guanine deaminase from
c. acetobutylicum with
bound guanine in the
active site
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-458458131ejwC1066-1513crystal structure of
wild-type klebsiella
aerogenes urease at
298k
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4613-453451141p1mA1-395structure of the hypothetical
protein tm0936 from
thermotoga maritima
at 1.5a bound to ni
and methionine
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
46551-431381131j79A4-346molecular structure
of dihydroorotase: a
paradigm for catalysis
through the use of a
binuclear metal center
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4613-426424142gokA19-419crystal structure of
the imidazolonepropionase
from agrobacterium tumefaciens
at 1.87 a resolution