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ModBase: Database of Comparative Protein Structure Models

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Sequence
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Database AnnotationOrganismProtein
Size
Modeled
Segment
SizeSeq
Id(%)
PDB
code
PDB
Segment
PDB Comment
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33175-310236223huuA37-271crystal structure of
transcription regulator
like protein from staphylococcus
haemolyticus
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33118-331314151jx6A27-348crystal structure of
luxp from vibrio harveyi
complexed with autoinducer-2
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33165-325261183brsA9-276crystal structure of
sugar transporter from
clostridium phytofermentans
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33162-325264123gbvA65-342crystal structure of
a putative laci transcriptional
regulator from bacteroides
fragilis
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
3316-5146432l8nA10-55
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33166-312247183bilA68-323crystal structure of
a probable laci family
transcriptional regulator
from corynebacterium
glutamicum
606373orf_f313Escherichia coli,
Escherichia coli K-12
31363-304242233c3kA8-249crystal structure of
an uncharacterized protein
from actinobacillus
succinogenes
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33166-325260203ksmA41-311crystal structure of
abc-type sugar transport
system, periplasmic
component from hahella
chejuensis
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
3316-331326333kjxA8-338crystal structure of
a transcriptional regulator,
lacl family protein
from silicibacter pomeroyi
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
331107-325219253brsA53-276crystal structure of
sugar transporter from
clostridium phytofermentans
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33166-330265172qvcA34-302crystal structure of
a periplasmic sugar
abc transporter from
thermotoga maritima
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33168-325258263ksmA43-311crystal structure of
abc-type sugar transport
system, periplasmic
component from hahella
chejuensis
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
3314-6360431cjgA2-61nmr structure of lac
repressor hp62-dna complex
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33162-325264243jy6A66-327crystal structure of
laci transcriptional
regulator from lactobacillus
brevis
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33125-331307141jx6A28-348crystal structure of
luxp from vibrio harveyi
complexed with autoinducer-2
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33166-322257113rotA25-293
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33162-319258223dbiA60-322crystal structure of
sugar-binding transcriptional
regulator (laci family)
from escherichia coli
complexed with phosphate
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33166-313248263cs3A62-302crystal structure of
sugar-binding transcriptional
regulator (laci family)
from enterococcus faecalis
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33166-317252213e61A62-320crystal structure of
a putative transcriptional
repressor of ribose
operon from staphylococcus
saprophyticus subsp.
saprophyticus
606373orf_f313Escherichia coli,
Escherichia coli K-12
31363-304242253egcA67-310crystal structure of
a putative ribose operon
repressor from burkholderia
thailandensis
606373orf_f313Escherichia coli,
Escherichia coli K-12
31363-304242223ctpA60-296crystal structure of
periplasmic binding
protein/laci transcriptional
regulator from alkaliphilus
metalliredigens qymf
complexed with d-xylulofuranose
606373orf_f313Escherichia coli,
Escherichia coli K-12
31366-304239202rgyA88-331crystal structure of
transcriptional regulator
of laci family from
burkhoderia phymatum
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33166-318253172rjoA43-312crystal structure of
twin-arginine translocation
pathway signal protein
from burkholderia phytofirmans
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33166-325260163g1wA45-323crystal structure of
sugar abc transporter
(sugar-binding protein)
from bacillus halodurans
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33163-330268243bblA63-338crystal structure of
a regulatory protein
of laci family from
chloroflexus aggregans
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33179-313235223gv0A84-320crystal structure of
laci family transcription
regulator from agrobacterium
tumefaciens
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33163-331269193cs3A59-318crystal structure of
sugar-binding transcriptional
regulator (laci family)
from enterococcus faecalis
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33164-330267373h5oA71-338the crystal structure
of transcription regulator
gntr from chromobacterium
violaceum
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33163-330268193clkA61-330crystal structure of
a transcription regulator
from lactobacillus plantarum
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33163-326264173gv0A66-333crystal structure of
laci family transcription
regulator from agrobacterium
tumefaciens
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33166-319254233kkeA64-323crystal structure of
a laci family transcriptional
regulator from mycobacterium
smegmatis
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
3315-5349511lqc2-51lac repressor headpiece
(residues 1-56), nmr,
32 structures
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33163-330268283jvdA64-323crystal structure of
putative transcription
regulation repressor
(laci family) from corynebacterium
glutamicum
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33163-319257243egcA67-325crystal structure of
a putative ribose operon
repressor from burkholderia
thailandensis
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33163-316254173gv0A66-323crystal structure of
laci family transcription
regulator from agrobacterium
tumefaciens
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
3316-331326261jftA2-331purine repressor mutant-hypoxanthine-purf
operator complex
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33166-307242273e61A62-310crystal structure of
a putative transcriptional
repressor of ribose
operon from staphylococcus
saprophyticus subsp.
saprophyticus
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33163-330268163hcwA59-336crystal structure of
probable maltose operon
transcriptional repressor
malr from staphylococcus
areus
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33177-297221183g85A80-302crystal structure of
laci family transcription
regulator from clostridium
acetobutylicum
606373orf_f313Escherichia coli,
Escherichia coli K-12
31363-304242243gybA63-299crystal structure of
a laci-family transcriptional
regulatory protein from
corynebacterium glutamicum
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33163-320258233jvdA64-314crystal structure of
putative transcription
regulation repressor
(laci family) from corynebacterium
glutamicum
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33163-314252263ctpA60-306crystal structure of
periplasmic binding
protein/laci transcriptional
regulator from alkaliphilus
metalliredigens qymf
complexed with d-xylulofuranose
606373orf_f313Escherichia coli,
Escherichia coli K-12
31363-304242212qu7A64-308crystal structure of
a putative transcription
regulator from staphylococcus
saprophyticus subsp.
saprophyticus
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33163-315253252qu7A64-319crystal structure of
a putative transcription
regulator from staphylococcus
saprophyticus subsp.
saprophyticus
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33162-331270133gbvA65-348crystal structure of
a putative laci transcriptional
regulator from bacteroides
fragilis
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33163-330268243bblA63-338crystal structure of
a regulatory protein
of laci family from
chloroflexus aggregans
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33166-320255303e3mA71-338crystal structure of
a laci family transcriptional
regulator from silicibacter
pomeroyi
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33163-313251203clkA61-317crystal structure of
a transcription regulator
from lactobacillus plantarum
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33162-330269213dbiA60-332crystal structure of
sugar-binding transcriptional
regulator (laci family)
from escherichia coli
complexed with phosphate
A0A017JMD9subname: full=hth-type transcriptional
regulator gntr {eco:0000313|embl:eye00122
.1};
Escherichia coli,
Escherichia fergusonii,
etc.
33163-325263153g85A66-330crystal structure of
laci family transcription
regulator from clostridium
acetobutylicum