University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Overview

Go to Sequence Overview
Search Summary
 
Perform Action on Selected Model(s) : 34 matches found.
TARGETMODEL DATATEMPLATE
Model
Icon
Model/Fold
Reliability
Sequence
Database
Link
Database AnnotationOrganismProtein
Size
Modeled
Segment
SizeSeq
Id(%)
PDB
code
PDB
Segment
PDB Comment
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630398-630233321sczA173-402improved structural
model for the catalytic
domain of e.coli dihydrolipoamide
succinyltransferase
P06959dihydrolipoyllysine-residue
acetyltransferase component
of pyruvatede dehydrog
enase complex (ec 2.3.1.12)
(e2) (dihydrolipoamidede
acetyltransferase component
of pyruvate dehydrogenase
complex)
Escherichia coli629199-298100201fyc3-105inner lipoyl domain
from human pyruvate
dehydrogenase (pdh)
complex, nmr, 1 structure
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630329-36436582eq8C131-166crystal structure of
lipoamide dehydrogenase
from thermus thermophilus
hb8 with psbdp
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630387-630244551dpbA396-637crystallographic and
enzymatic investigations
on the role of ser558,
his610 and asn614 in
the catalytic mechanism
of azotobacter vinelandii
dihydrolipoamide acetyltransferase
(e2p)
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
63013-7967252b8fA7-73solution structure of
bacillus subtilis blap
apo form (energy minimized
mean structure)
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630375-630256391b5sA187-425dihydrolipoyl transacetylase
(e.c.2.3.1.12) catalytic
domain (residues 184-425)
from bacillus stearothermophilus
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630206-293881002k7vA2-89deletions in a surface
loop divert the folding
of a protein domain
into a metastable dimeric
form
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630372-630259401b5sA184-425dihydrolipoyl transacetylase
(e.c.2.3.1.12) catalytic
domain (residues 184-425)
from bacillus stearothermophilus
P06959dihydrolipoyllysine-residue
acetyltransferase component
of pyruvatede dehydrog
enase complex (ec 2.3.1.12)
(e2) (dihydrolipoamidede
acetyltransferase component
of pyruvate dehydrogenase
complex)
Escherichia coli629328-36538471ebdC131-168dihydrolipoamide dehydrogenase
complexed with the binding
domain of the dihydrolipoamide
acetylase
P06959dihydrolipoyllysine-residue
acetyltransferase component
of pyruvatede dehydrog
enase complex (ec 2.3.1.12)
(e2) (dihydrolipoamidede
acetyltransferase component
of pyruvate dehydrogenase
complex)
Escherichia coli629385-629245551eaf395-637atomic structure of
the cubic core of the
pyruvate dehydrogenase
multienzyme complex
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
63017-7559323u9sA657-715
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630205-28480991qjoA1-80innermost lipoyl domain
of the pyruvate dehydrogenase
from escherichia coli
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630206-293881002k7vA2-89deletions in a surface
loop divert the folding
of a protein domain
into a metastable dimeric
form
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
63016-6853422d5dA87-139structure of biotin
carboxyl carrier protein
(74val start) from pyrococcus
horikoshi ot3 ligand
free form ii
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630424-630207352ii3A213-418crystal structure of
a cubic core of the
dihydrolipoamide acyltransferase
(e2b) component in the
branched-chain alpha-ketoacid
dehydrogenase complex
(bckdc), oxidized coenzyme
a-bound form
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
63045-151107152k32A3-109truncated acra from
campylobacter jejuni
for glycosylation studies
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630384-6292461004n72A383-628
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
6301-5050782k7vA1-50deletions in a surface
loop divert the folding
of a protein domain
into a metastable dimeric
form
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630119-17658402d5dA87-144structure of biotin
carboxyl carrier protein
(74val start) from pyrococcus
horikoshi ot3 ligand
free form ii
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630203-28280351k8mA1-82solution structure of
the lipoic acid-bearing
domain of the e2 component
of human, mitochondrial
branched-chain alpha-ketoacid
dehydrogenase
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
6305-8076551iyuA4-78lipoyl domain of pyruvate
dehydrogenase complex,
nmr, minimized average
structure
P06959dihydrolipoyllysine-residue
acetyltransferase component
of pyruvatede dehydrog
enase complex (ec 2.3.1.12)
(e2) (dihydrolipoamidede
acetyltransferase component
of pyruvate dehydrogenase
complex)
Escherichia coli629387-629243391b5sA186-425dihydrolipoyl transacetylase
(e.c.2.3.1.12) catalytic
domain (residues 184-425)
from bacillus stearothermophilus
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
6303-7977491gjxA3-80solution structure of
the lipoyl domain of
the chimeric dihydrolipoyl
dehydrogenase p64k from
neisseria meningitidis
P06959dihydrolipoyllysine-residue
acetyltransferase component
of pyruvatede dehydrog
enase complex (ec 2.3.1.12)
(e2) (dihydrolipoamidede
acetyltransferase component
of pyruvate dehydrogenase
complex)
Escherichia coli629102-18483291k8mA2-86solution structure of
the lipoic acid-bearing
domain of the e2 component
of human, mitochondrial
branched-chain alpha-ketoacid
dehydrogenase
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630327-372461004qoyE122-167
P06959dihydrolipoyllysine-residue
acetyltransferase component
of pyruvatede dehydrog
enase complex (ec 2.3.1.12)
(e2) (dihydrolipoamidede
acetyltransferase component
of pyruvate dehydrogenase
complex)
Escherichia coli629200-311112161htp17-130refined structures at
2 angstroms and 2.2
angstroms of the two
forms of the h-protein,
a lipoamide-containing
protein of the glycine
decarboxylase complex
P06959dihydrolipoyllysine-residue
acetyltransferase component
of pyruvatede dehydrog
enase complex (ec 2.3.1.12)
(e2) (dihydrolipoamidede
acetyltransferase component
of pyruvate dehydrogenase
complex)
Escherichia coli629104-18279851qjoA2-80innermost lipoyl domain
of the pyruvate dehydrogenase
from escherichia coli
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630386-630245541dpbA395-637crystallographic and
enzymatic investigations
on the role of ser558,
his610 and asn614 in
the catalytic mechanism
of azotobacter vinelandii
dihydrolipoamide acetyltransferase
(e2p)
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630326-36641461w85I128-168the crystal structure
of pyruvate deydrogenase
e1 bound to the peripheral
subunit binding domain
of e2
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630206-293881002k7vA2-89deletions in a surface
loop divert the folding
of a protein domain
into a metastable dimeric
form
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630386-630245551eaf395-637atomic structure of
the cubic core of the
pyruvate dehydrogenase
multienzyme complex
P06959dihydrolipoyllysine-residue
acetyltransferase component
of pyruvatede dehydrog
enase complex (ec 2.3.1.12)
(e2) (dihydrolipoamidede
acetyltransferase component
of pyruvate dehydrogenase
complex)
Escherichia coli6291-7373331dczA54-122biotin carboxyl carrier
domain of transcarboxylase
(tc 1.3s)
P06959recname: full=dihydrolipoyllysine-residue
acetyltransferase component
of pyruvat e dehydrogenase
complex;ec=2.3.1.12;altname:
full=dihydrolipoamide acetyltransferase
component of pyruvate dehydrogenase
Escherichia coli,
Escherichia fergusonii,
etc.
630105-18379501iyuA1-78lipoyl domain of pyruvate
dehydrogenase complex,
nmr, minimized average
structure
P06959dihydrolipoyllysine-residue
acetyltransferase component
of pyruvatede dehydrog
enase complex (ec 2.3.1.12)
(e2) (dihydrolipoamidede
acetyltransferase component
of pyruvate dehydrogenase
complex)
Escherichia coli629204-28380551gjxA1-81solution structure of
the lipoyl domain of
the chimeric dihydrolipoyl
dehydrogenase p64k from
neisseria meningitidis