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ModBase: Database of Comparative Protein Structure Models

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Database AnnotationOrganismProtein
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Modeled
Segment
SizeSeq
Id(%)
PDB
code
PDB
Segment
PDB Comment
29726218a chain a, hinge-bending
motion of d-allose binding
protein from escherichia
col i: three open conformations
2885-269265233brsA11-266crystal structure of
sugar transporter from
clostridium phytofermentans
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-292265163rotA26-286
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31117-29127593eafA61-318crystal structure of
abc transporter, substrate
binding protein aeropyrum
pernix
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-294267193jy6A71-318crystal structure of
laci transcriptional
regulator from lactobacillus
brevis
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-3052781001gudA5-282hinge-bending motion
of d-allose binding
protein from escherichia
coli: three open conformations
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31129-288260243h5oA75-321the crystal structure
of transcription regulator
gntr from chromobacterium
violaceum
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31126-221196243rotA24-202
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-306279173jvdA68-322crystal structure of
putative transcription
regulation repressor
(laci family) from corynebacterium
glutamicum
29726220b chain b, hinge-bending
motion of d-allose binding
protein from escherichia
col i: three open conformations
Escherichia coli2885-281277173gbvA70-343crystal structure of
a putative laci transcriptional
regulator from bacteroides
fragilis
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-292265233brsA11-266crystal structure of
sugar transporter from
clostridium phytofermentans
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-292265173e3mA72-331crystal structure of
a laci family transcriptional
regulator from silicibacter
pomeroyi
1197465unnamed protein product,
partial
Escherichia coli13028-11891283g1wA46-135crystal structure of
sugar abc transporter
(sugar-binding protein)
from bacillus halodurans
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-311284173hs3A63-315crystal structure of
periplasmic binding
ribose operon repressor
protein from lactobacillus
acidophilus
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-305278173gbvA70-344crystal structure of
a putative laci transcriptional
regulator from bacteroides
fragilis
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-306279182qu7A68-332crystal structure of
a putative transcription
regulator from staphylococcus
saprophyticus subsp.
saprophyticus
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-304277183egcA71-331crystal structure of
a putative ribose operon
repressor from burkholderia
thailandensis
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
3111-311311151jx6A41-350crystal structure of
luxp from vibrio harveyi
complexed with autoinducer-2
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
3112-311310171efaA33-326crystal structure of
the lac repressor dimer
bound to operator and
the anti-inducer onpf
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31127-304278183bblA70-334crystal structure of
a regulatory protein
of laci family from
chloroflexus aggregans
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-294267203e61A63-319crystal structure of
a putative transcriptional
repressor of ribose
operon from staphylococcus
saprophyticus subsp.
saprophyticus
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-294267193gybA67-311crystal structure of
a laci-family transcriptional
regulatory protein from
corynebacterium glutamicum
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-296269223c3kA12-268crystal structure of
an uncharacterized protein
from actinobacillus
succinogenes
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-295268153gv0A70-324crystal structure of
laci family transcription
regulator from agrobacterium
tumefaciens
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-285258183bilA69-308crystal structure of
a probable laci family
transcriptional regulator
from corynebacterium
glutamicum
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-294267143kkeA65-320crystal structure of
a laci family transcriptional
regulator from mycobacterium
smegmatis
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31138-269232263h75A66-296crystal structure of
a periplasmic sugar-binding
protein from the pseudomonas
fluorescens
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-311284213h75A56-336crystal structure of
a periplasmic sugar-binding
protein from the pseudomonas
fluorescens
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-310283262rjoA44-327crystal structure of
twin-arginine translocation
pathway signal protein
from burkholderia phytofirmans
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
311128-231104253g85A156-257crystal structure of
laci family transcription
regulator from clostridium
acetobutylicum
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31112-296285133huuA22-283crystal structure of
transcription regulator
like protein from staphylococcus
haemolyticus
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31124-3112881001gudA1-288hinge-bending motion
of d-allose binding
protein from escherichia
coli: three open conformations
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-304277173gbvA70-343crystal structure of
a putative laci transcriptional
regulator from bacteroides
fragilis
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-305278263ksmA42-313crystal structure of
abc-type sugar transport
system, periplasmic
component from hahella
chejuensis
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31136-250215272qu7A75-279crystal structure of
a putative transcription
regulator from staphylococcus
saprophyticus subsp.
saprophyticus
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
311127-296170233clkA150-324crystal structure of
a transcription regulator
from lactobacillus plantarum
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31124-3112881001gudA1-288hinge-bending motion
of d-allose binding
protein from escherichia
coli: three open conformations
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-305278143jy6A71-329crystal structure of
laci transcriptional
regulator from lactobacillus
brevis
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31136-310275312qvcA42-309crystal structure of
a periplasmic sugar
abc transporter from
thermotoga maritima
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31124-186163243jvdA64-239crystal structure of
putative transcription
regulation repressor
(laci family) from corynebacterium
glutamicum
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-310283178abp6-290sugar-binding and crystallographic
studies of an arabinose-binding
protein mutant (met108leu)
which exhibits enhanced
affinity and altered
specificity
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-305278143jy6A71-329crystal structure of
laci transcriptional
regulator from lactobacillus
brevis
29726220b chain b, hinge-bending
motion of d-allose binding
protein from escherichia
col i: three open conformations
Escherichia coli2887-283277272qvcA36-302crystal structure of
a periplasmic sugar
abc transporter from
thermotoga maritima
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31129-311283243brsA12-279crystal structure of
sugar transporter from
clostridium phytofermentans
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
311134-311178273l49A130-307crystal structure of
abc sugar transporter
subunit from rhodobacter
sphaeroides 2.4.1
1197465unnamed protein product,
partial
Escherichia coli13030-11889282qvcA36-123crystal structure of
a periplasmic sugar
abc transporter from
thermotoga maritima
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31124-3112881001gudA1-288hinge-bending motion
of d-allose binding
protein from escherichia
coli: three open conformations
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
3112-311310141jx6A41-350crystal structure of
luxp from vibrio harveyi
complexed with autoinducer-2
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-311284262rjoA44-328crystal structure of
twin-arginine translocation
pathway signal protein
from burkholderia phytofirmans
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31128-311284193l49A35-307crystal structure of
abc sugar transporter
subunit from rhodobacter
sphaeroides 2.4.1
P39265recname: full=d-allose-binding
periplasmic protein;short=albp;flags:
precursor;
Escherichia coli,
Shigella boydii, etc.
31130-292263262qvcA36-288crystal structure of
a periplasmic sugar
abc transporter from
thermotoga maritima