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ModBase: Database of Comparative Protein Structure Models

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TARGETMODEL DATATEMPLATE
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Sequence
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Database AnnotationOrganismProtein
Size
Modeled
Segment
SizeSeq
Id(%)
PDB
code
PDB
Segment
PDB Comment
P02919.2pbpb_ecoli recname: full=penicillin-binding
protein 1b; short=pbp-1b;
short=pbp1 b; altname: full=murein
polymerase; includes: recname:
full=penicillin-insensitive
transglycosylase; altname:
full=pepti
Escherichia coli,
Shigella sonnei, etc.
844784-82744121b1uA47-88crystal structure of
the bifunctional inhibitor
ragi
42469unnamed protein productEscherichia coli79927-7557291003vmaA72-800
P02919.2pbpb_ecoli recname: full=penicillin-binding
protein 1b; short=pbp-1b;
short=pbp1 b; altname: full=murein
polymerase; includes: recname:
full=penicillin-insensitive
transglycosylase; altname:
full=pepti
Escherichia coli,
Shigella sonnei, etc.
84472-8007291003vmaA72-800
P02919.2pbpb_ecoli recname: full=penicillin-binding
protein 1b; short=pbp-1b;
short=pbp1 b; altname: full=murein
polymerase; includes: recname:
full=penicillin-insensitive
transglycosylase; altname:
full=pepti
Escherichia coli,
Shigella sonnei, etc.
844225-818594111rp5B67-685pbp2x from streptococcus
pneumoniae strain 5259
with reduced susceptibility
to beta-lactam antibiotics
P02919penicillin-binding protein
1b (pbp-1b) (pbp1b) (murein
polymerase)de [includes
: penicillin-insensitive
transglycosylas
Escherichia coli84472-8007291003vmaA72-800
P02919.2pbpb_ecoli recname: full=penicillin-binding
protein 1b; short=pbp-1b;
short=pbp1 b; altname: full=murein
polymerase; includes: recname:
full=penicillin-insensitive
transglycosylase; altname:
full=pepti
Escherichia coli,
Shigella sonnei, etc.
8441-426426133zqjC33-568
P02919.2pbpb_ecoli recname: full=penicillin-binding
protein 1b; short=pbp-1b;
short=pbp1 b; altname: full=murein
polymerase; includes: recname:
full=penicillin-insensitive
transglycosylase; altname:
full=pepti
Escherichia coli,
Shigella sonnei, etc.
844339-843505202y2mA105-789
P02919.2pbpb_ecoli recname: full=penicillin-binding
protein 1b; short=pbp-1b;
short=pbp1 b; altname: full=murein
polymerase; includes: recname:
full=penicillin-insensitive
transglycosylase; altname:
full=pepti
Escherichia coli,
Shigella sonnei, etc.
84472-8007291005fgzA72-800
P02919.2pbpb_ecoli recname: full=penicillin-binding
protein 1b; short=pbp-1b;
short=pbp1 b; altname: full=murein
polymerase; includes: recname:
full=penicillin-insensitive
transglycosylase; altname:
full=pepti
Escherichia coli,
Shigella sonnei, etc.
844206-392187432oqoA57-238crystal structure of
a peptidoglycan glycosyltransferase
from a class a pbp:
insight into bacterial
cell wall synthesis
P02919.2pbpb_ecoli recname: full=penicillin-binding
protein 1b; short=pbp-1b;
short=pbp1 b; altname: full=murein
polymerase; includes: recname:
full=penicillin-insensitive
transglycosylase; altname:
full=pepti
Escherichia coli,
Shigella sonnei, etc.
844339-843505202y2mA105-789
P02919.2pbpb_ecoli recname: full=penicillin-binding
protein 1b; short=pbp-1b;
short=pbp1 b; altname: full=murein
polymerase; includes: recname:
full=penicillin-insensitive
transglycosylase; altname:
full=pepti
Escherichia coli,
Shigella sonnei, etc.
844795-82733271g9lA14-48solution structure of
the pabc domain of human
poly(a) binding protein
P02919.2pbpb_ecoli recname: full=penicillin-binding
protein 1b; short=pbp-1b;
short=pbp1 b; altname: full=murein
polymerase; includes: recname:
full=penicillin-insensitive
transglycosylase; altname:
full=pepti
Escherichia coli,
Shigella sonnei, etc.
844791-82737162ds2B12-48crystal structure of
mabinlin ii
P02919.2pbpb_ecoli recname: full=penicillin-binding
protein 1b; short=pbp-1b;
short=pbp1 b; altname: full=murein
polymerase; includes: recname:
full=penicillin-insensitive
transglycosylase; altname:
full=pepti
Escherichia coli,
Shigella sonnei, etc.
844110-18374313fpnB158-224crystal structure of
uvra-uvrb interaction
domains
P02919.2pbpb_ecoli recname: full=penicillin-binding
protein 1b; short=pbp-1b;
short=pbp1 b; altname: full=murein
polymerase; includes: recname:
full=penicillin-insensitive
transglycosylase; altname:
full=pepti
Escherichia coli,
Shigella sonnei, etc.
844378-834457131qmeA185-745penicillin-binding protein
2x (pbp-2x)
P02919.2pbpb_ecoli recname: full=penicillin-binding
protein 1b; short=pbp-1b;
short=pbp1 b; altname: full=murein
polymerase; includes: recname:
full=penicillin-insensitive
transglycosylase; altname:
full=pepti
Escherichia coli,
Shigella sonnei, etc.
844791-82737162ds2B12-48crystal structure of
mabinlin ii
P02919.2pbpb_ecoli recname: full=penicillin-binding
protein 1b; short=pbp-1b;
short=pbp1 b; altname: full=murein
polymerase; includes: recname:
full=penicillin-insensitive
transglycosylase; altname:
full=pepti
Escherichia coli,
Shigella sonnei, etc.
84466-7997341003fwlA66-799crystal structure of
the full-length transglycosylase
pbp1b from escherichia
coli
380259141a chain a, crystal structure
of the full-length transglycosylase
pbp1b from esch erichia coli
76836-7647291003vmaA72-800
380259141a chain a, crystal structure
of the full-length transglycosylase
pbp1b from esch erichia coli
7681-3333701sskA1-34structure of the n-terminal
rna-binding domain of
the sars cov nucleocapsid
protein
380259141a chain a, crystal structure
of the full-length transglycosylase
pbp1b from esch erichia coli
7685-3531682knoA2-37nmr solution structure
of sh2 domain of the
human tensin like c1
domain containing phosphatase
(tenc1)
P02919.2pbpb_ecoli recname: full=penicillin-binding
protein 1b; short=pbp-1b;
short=pbp1 b; altname: full=murein
polymerase; includes: recname:
full=penicillin-insensitive
transglycosylase; altname:
full=pepti
Escherichia coli,
Shigella sonnei, etc.
844788-83043143pzdA1563-1605
380259141a chain a, crystal structure
of the full-length transglycosylase
pbp1b from esch erichia coli
7683-3230703mgcA-31-7teg12 apo
238828188a chain a, crystal structure
of the full-length transglycosylase
pbp1b from esch erichia coli
75119-747729973vmaA72-800
P02919.2pbpb_ecoli recname: full=penicillin-binding
protein 1b; short=pbp-1b;
short=pbp1 b; altname: full=murein
polymerase; includes: recname:
full=penicillin-insensitive
transglycosylase; altname:
full=pepti
Escherichia coli,
Shigella sonnei, etc.
844409-778370262c5wB266-650penicillin-binding protein
1a (pbp-1a) acyl-enzyme
complex ( cefotaxime)
from streptococcus pneumoniae