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ModBase: Database of Comparative Protein Structure Models

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TARGETMODEL DATATEMPLATE
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Reliability
Sequence
Database
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Database AnnotationOrganismProtein
Size
Modeled
Segment
SizeSeq
Id(%)
PDB
code
PDB
Segment
PDB Comment
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29628-296269233c3kA10-275crystal structure of
an uncharacterized protein
from actinobacillus
succinogenes
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29628-295268233brsA9-279crystal structure of
sugar transporter from
clostridium phytofermentans
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29627-288262153gv0A67-327crystal structure of
laci family transcription
regulator from agrobacterium
tumefaciens
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29627-296270242qu7A65-331crystal structure of
a putative transcription
regulator from staphylococcus
saprophyticus subsp.
saprophyticus
157830798a chain a, identical mutations
at corresponding positions
in two homologous prot eins
with non-identical effects
Escherichia coli2712-271270173g1wA43-316crystal structure of
sugar abc transporter
(sugar-binding protein)
from bacillus halodurans
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29628-296269223l49A33-308crystal structure of
abc sugar transporter
subunit from rhodobacter
sphaeroides 2.4.1
10000562dri chain , d-ribose-binding
protein complexed with beta-d-ribose
Escherichia coli2713-271269242qvcA33-301crystal structure of
a periplasmic sugar
abc transporter from
thermotoga maritima
145579471a chain a, rational stabilization
of e. coli ribose binding
protein
2784-270267282rjoA42-320crystal structure of
twin-arginine translocation
pathway signal protein
from burkholderia phytofirmans
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
2961-296296201efaA33-327crystal structure of
the lac repressor dimer
bound to operator and
the anti-inducer onpf
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29629-270242253c3kA11-247crystal structure of
an uncharacterized protein
from actinobacillus
succinogenes
157830874a chain a, probing protein-protein
interactions: the ribose-binding
protein in b acterial transport
and chemotaxis
Escherichia coli2713-271269242qvcA33-301crystal structure of
a periplasmic sugar
abc transporter from
thermotoga maritima
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29628-296269173gbvA68-346crystal structure of
a putative laci transcriptional
regulator from bacteroides
fragilis
157830875a chain a, probing protein-protein
interactions: the ribose-binding
protein in b acterial transport
and chemotaxis
Escherichia coli2712-271270173g1wA43-316crystal structure of
sugar abc transporter
(sugar-binding protein)
from bacillus halodurans
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29628-296269173e3mA70-341crystal structure of
a laci family transcriptional
regulator from silicibacter
pomeroyi
145579471a chain a, rational stabilization
of e. coli ribose binding
protein
2783-272270173g1wA43-316crystal structure of
sugar abc transporter
(sugar-binding protein)
from bacillus halodurans
10000562dri chain , d-ribose-binding
protein complexed with beta-d-ribose
Escherichia coli2713-271269173gbvA68-346crystal structure of
a putative laci transcriptional
regulator from bacteroides
fragilis
157830875a chain a, probing protein-protein
interactions: the ribose-binding
protein in b acterial transport
and chemotaxis
Escherichia coli2713-270268233brsA9-279crystal structure of
sugar transporter from
clostridium phytofermentans
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29628-296269242qvcA33-301crystal structure of
a periplasmic sugar
abc transporter from
thermotoga maritima
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29628-296269173kkeA63-334crystal structure of
a laci family transcriptional
regulator from mycobacterium
smegmatis
145579471a chain a, rational stabilization
of e. coli ribose binding
protein
2784-272269252qvcA33-301crystal structure of
a periplasmic sugar
abc transporter from
thermotoga maritima
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29624-294271272rjoA38-320crystal structure of
twin-arginine translocation
pathway signal protein
from burkholderia phytofirmans
157830875a chain a, probing protein-protein
interactions: the ribose-binding
protein in b acterial transport
and chemotaxis
Escherichia coli2713-271269242qvcA33-301crystal structure of
a periplasmic sugar
abc transporter from
thermotoga maritima
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29626-2962711002driA1-271probing protein-protein
interactions: the ribose
binding protein in bacterial
transport and chemotaxis
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29689-246158273g85A121-283crystal structure of
laci family transcription
regulator from clostridium
acetobutylicum
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29628-255228143hutA42-278crystal structure of
a putative branched-chain
amino acid abc transporter
from rhodospirillum
rubrum
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29627-293267243l6uA9-281crystal structure of
abc-type sugar transport
system, periplasmic
component from exiguobacterium
sibiricum
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29637-296260183kjxA77-336crystal structure of
a transcriptional regulator,
lacl family protein
from silicibacter pomeroyi
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29628-296269223gybA65-325crystal structure of
a laci-family transcriptional
regulatory protein from
corynebacterium glutamicum
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29628-296269233k4hA10-282crystal structure of
putative transcriptional
regulator laci from
bacillus cereus subsp.
cytotoxis nvh 391-98
157830874a chain a, probing protein-protein
interactions: the ribose-binding
protein in b acterial transport
and chemotaxis
Escherichia coli2712-271270173g1wA43-316crystal structure of
sugar abc transporter
(sugar-binding protein)
from bacillus halodurans
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29627-296270243clkA62-329crystal structure of
a transcription regulator
from lactobacillus plantarum
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29628-296269183hs3A61-316crystal structure of
periplasmic binding
ribose operon repressor
protein from lactobacillus
acidophilus
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29628-296269192rgyA87-355crystal structure of
transcriptional regulator
of laci family from
burkhoderia phymatum
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29627-296270173g1wA43-316crystal structure of
sugar abc transporter
(sugar-binding protein)
from bacillus halodurans
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29626-290265183rotA22-294
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29651-283233273l49A56-295crystal structure of
abc sugar transporter
subunit from rhodobacter
sphaeroides 2.4.1
3402104b chain b, d67r mutant of
d-ribose-binding protein
from escherichia coli
Escherichia coli2713-269267282rjoA42-320crystal structure of
twin-arginine translocation
pathway signal protein
from burkholderia phytofirmans
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29628-296269193h5oA72-337the crystal structure
of transcription regulator
gntr from chromobacterium
violaceum
145579471a chain a, rational stabilization
of e. coli ribose binding
protein
2784-272269173gbvA68-346crystal structure of
a putative laci transcriptional
regulator from bacteroides
fragilis
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29621-291271243kjxA58-329crystal structure of
a transcriptional regulator,
lacl family protein
from silicibacter pomeroyi
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29627-293267233egcA68-331crystal structure of
a putative ribose operon
repressor from burkholderia
thailandensis
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29635-296262203h5tA82-355crystal structure of
a transcriptional regulator,
lacl family protein
from corynebacterium
glutamicum
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29629-282254223jvdA67-318crystal structure of
putative transcription
regulation repressor
(laci family) from corynebacterium
glutamicum
157830798a chain a, identical mutations
at corresponding positions
in two homologous prot eins
with non-identical effects
Escherichia coli2713-271269242qvcA33-301crystal structure of
a periplasmic sugar
abc transporter from
thermotoga maritima
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29628-296269273ctpA62-321crystal structure of
periplasmic binding
protein/laci transcriptional
regulator from alkaliphilus
metalliredigens qymf
complexed with d-xylulofuranose
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29638-240203213hcwA76-280crystal structure of
probable maltose operon
transcriptional repressor
malr from staphylococcus
areus
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29627-294268173g1wA43-313crystal structure of
sugar abc transporter
(sugar-binding protein)
from bacillus halodurans
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29627-296270233h75A53-332crystal structure of
a periplasmic sugar-binding
protein from the pseudomonas
fluorescens
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29628-296269233k4hA10-282crystal structure of
putative transcriptional
regulator laci from
bacillus cereus subsp.
cytotoxis nvh 391-98
P02925.1rbsb_ecoli recname: full=d-ribose-binding
periplasmic protein; flags:
precursor
Escherichia coli,
Escherichia coli K-12,
etc.
29633-293261233mizA69-331crystal structure of
a putative transcriptional
regulator protein, lacl
family from rhizobium
etli