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ModBase: Database of Comparative Protein Structure Models

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Database AnnotationOrganismProtein
Size
Modeled
Segment
SizeSeq
Id(%)
PDB
code
PDB
Segment
PDB Comment
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32928-315288143kkeA64-334crystal structure of
a laci family transcriptional
regulator from mycobacterium
smegmatis
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
3292-323322161jftA34-338purine repressor mutant-hypoxanthine-purf
operator complex
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32927-300274163rotA24-287
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32998-255158223g85A117-280crystal structure of
laci family transcription
regulator from clostridium
acetobutylicum
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
3292-323322141jx6A41-354crystal structure of
luxp from vibrio harveyi
complexed with autoinducer-2
157830008a chain a, a pro to gly mutation
in the hinge of the arabinose-binding
protein e nhances binding
and alters specificity: sugar-
binding and crystallographic
studies
Escherichia coli3064-300297182rjoA42-337crystal structure of
twin-arginine translocation
pathway signal protein
from burkholderia phytofirmans
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32915-326312141jx6A54-360crystal structure of
luxp from vibrio harveyi
complexed with autoinducer-2
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32925-3293051008abpA2-306sugar-binding and crystallographic
studies of an arabinose-binding
protein mutant (met108leu)
which exhibits enhanced
affinity and altered
specificity
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32926-327302202qvcA32-330crystal structure of
a periplasmic sugar
abc transporter from
thermotoga maritima
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32941-255215223h75A64-277crystal structure of
a periplasmic sugar-binding
protein from the pseudomonas
fluorescens
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32928-313286143egcA70-332crystal structure of
a putative ribose operon
repressor from burkholderia
thailandensis
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
3292-325324161bdhA34-339purine repressor mutant-hypoxanthine-palindromic
operator complex
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32924-329306122fqxA18-321pnra from treponema
pallidum complexed with
guanosine
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32928-252225253gybA66-266crystal structure of
a laci-family transcriptional
regulatory protein from
corynebacterium glutamicum
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32928-309282123gv0A69-331crystal structure of
laci family transcription
regulator from agrobacterium
tumefaciens
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32928-318291143cs3A62-319crystal structure of
sugar-binding transcriptional
regulator (laci family)
from enterococcus faecalis
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32928-320293133e3mA71-346crystal structure of
a laci family transcriptional
regulator from silicibacter
pomeroyi
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32931-315285203brsA13-280crystal structure of
sugar transporter from
clostridium phytofermentans
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32928-318291163c3kA11-278crystal structure of
an uncharacterized protein
from actinobacillus
succinogenes
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32928-316289132rgyA88-356crystal structure of
transcriptional regulator
of laci family from
burkhoderia phymatum
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32925-3293051008abp2-306sugar-binding and crystallographic
studies of an arabinose-binding
protein mutant (met108leu)
which exhibits enhanced
affinity and altered
specificity
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32973-300228243h5tA124-343crystal structure of
a transcriptional regulator,
lacl family protein
from corynebacterium
glutamicum
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32928-316289143h5oA73-338the crystal structure
of transcription regulator
gntr from chromobacterium
violaceum
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32925-3293051001abeA2-306novel stereospecificity
of the l-arabinose-binding
protein
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32927-323297172rjoA42-337crystal structure of
twin-arginine translocation
pathway signal protein
from burkholderia phytofirmans
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32927-316290163bblA65-338crystal structure of
a regulatory protein
of laci family from
chloroflexus aggregans
157829783a chain a, novel stereospecificity
of the l-arabinose-binding
protein
Escherichia coli3064-300297182rjoA42-337crystal structure of
twin-arginine translocation
pathway signal protein
from burkholderia phytofirmans
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32923-316294133l49A29-309crystal structure of
abc sugar transporter
subunit from rhodobacter
sphaeroides 2.4.1
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32927-314288193ksmA40-314crystal structure of
abc-type sugar transport
system, periplasmic
component from hahella
chejuensis
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32928-315288163ctpA63-321crystal structure of
periplasmic binding
protein/laci transcriptional
regulator from alkaliphilus
metalliredigens qymf
complexed with d-xylulofuranose
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32929-319291143gbvA70-350crystal structure of
a putative laci transcriptional
regulator from bacteroides
fragilis
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32925-3293051001abeA2-306novel stereospecificity
of the l-arabinose-binding
protein
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32937-316280153h5tA85-356crystal structure of
a transcriptional regulator,
lacl family protein
from corynebacterium
glutamicum
157837083a chain a, sugar-binding
and crystallographic studies
of an arabinose- binding
p rotein mutant (met108leu)
which exhibits enhanced affinity
and altered specificity
Escherichia coli3064-300297182rjoA42-337crystal structure of
twin-arginine translocation
pathway signal protein
from burkholderia phytofirmans
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32928-310283143l6uA11-281crystal structure of
abc-type sugar transport
system, periplasmic
component from exiguobacterium
sibiricum
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32929-315287143g85A70-334crystal structure of
laci family transcription
regulator from clostridium
acetobutylicum
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
329170-23364293gbvA135-196crystal structure of
a putative laci transcriptional
regulator from bacteroides
fragilis
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32928-316289163gybA66-326crystal structure of
a laci-family transcriptional
regulatory protein from
corynebacterium glutamicum
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32927-323297172rjoA42-337crystal structure of
twin-arginine translocation
pathway signal protein
from burkholderia phytofirmans
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32927-319293163g1wA44-331crystal structure of
sugar abc transporter
(sugar-binding protein)
from bacillus halodurans
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
329157-266110353g1wA165-250crystal structure of
sugar abc transporter
(sugar-binding protein)
from bacillus halodurans
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
3291-323323141jx6A41-354crystal structure of
luxp from vibrio harveyi
complexed with autoinducer-2
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32923-301279153i45A3-282crystal structure of
putative twin-arginine
translocation pathway
signal protein from
rhodospirillum rubrum
atcc 11170
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32928-316289122qu7A67-332crystal structure of
a putative transcription
regulator from staphylococcus
saprophyticus subsp.
saprophyticus
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32927-3293031008abp4-306sugar-binding and crystallographic
studies of an arabinose-binding
protein mutant (met108leu)
which exhibits enhanced
affinity and altered
specificity
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32929-322294173h75A56-344crystal structure of
a periplasmic sugar-binding
protein from the pseudomonas
fluorescens
P02924recname: full=l-arabinose-binding
periplasmic protein;short=abp;flags:
precursor ;
Escherichia coli,
Klebsiella oxytoca,
etc.
32925-3293051008abpA2-306sugar-binding and crystallographic
studies of an arabinose-binding
protein mutant (met108leu)
which exhibits enhanced
affinity and altered
specificity