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ModBase: Database of Comparative Protein Structure Models

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Sequence
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Database AnnotationOrganismProtein
Size
Modeled
Segment
SizeSeq
Id(%)
PDB
code
PDB
Segment
PDB Comment
39654107a chain a, crystal structure
of a d,l-lysine complex of
diaminopimelate decarbox
ylase
Escherichia coli4252-4224211001knwA2-422crystal structure of
diaminopimelate decarboxylase
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
4202-4204191001knwA2-420crystal structure of
diaminopimelate decarboxylase
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
4201-420420303n2bA1-4141.8 angstrom resolution
crystal structure of
diaminopimelate decarboxylase
(lysa) from vibrio cholerae.
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
42032-232201163cpgA60-252crystal structure of
an unknown protein from
bifidobacterium adolescentis
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
42020-407388133co8A2-368crystal structure of
alanine racemase from
oenococcus oeni
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
42024-406383131bd0A3-377alanine racemase complexed
with alanine phosphonate
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
4202-4204191001knwA2-420crystal structure of
diaminopimelate decarboxylase
39654107a chain a, crystal structure
of a d,l-lysine complex of
diaminopimelate decarbox
ylase
Escherichia coli4259-420412281tufA25-443crystal structure of
diaminopimelate decarboxylase
from m. jannaschi
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
42027-396370153co8A9-358crystal structure of
alanine racemase from
oenococcus oeni
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
4201-418418283n2bA1-4121.8 angstrom resolution
crystal structure of
diaminopimelate decarboxylase
(lysa) from vibrio cholerae.
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
42034-232199131ct5A20-229crystal structure of
yeast hypothetical protein
ybl036c-selenomet crystal
39654107a chain a, crystal structure
of a d,l-lysine complex of
diaminopimelate decarbox
ylase
Escherichia coli42520-407388133co8A2-368crystal structure of
alanine racemase from
oenococcus oeni
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
42018-420403331tufA36-443crystal structure of
diaminopimelate decarboxylase
from m. jannaschi
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
42022-396375221f3tC15-368crystal structure of
trypanosoma brucei ornithine
decarboxylase (odc)
complexed with putrescine,
odc's reaction product.
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
4201-420420291tufA16-443crystal structure of
diaminopimelate decarboxylase
from m. jannaschi
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
42022-407386123hurA3-384crystal structure of
alanine racemase from
oenococcus oeni
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
42022-410389211f3tA15-378crystal structure of
trypanosoma brucei ornithine
decarboxylase (odc)
complexed with putrescine,
odc's reaction product.
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
4201-420420281twiA16-443crystal structure of
diaminopimelate decarboxylase
from m. jannaschii in
co-complex with l-lysine
39654107a chain a, crystal structure
of a d,l-lysine complex of
diaminopimelate decarbox
ylase
Escherichia coli42534-232199131ct5A20-229crystal structure of
yeast hypothetical protein
ybl036c-selenomet crystal
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
42027-194168213hurA8-167crystal structure of
alanine racemase from
oenococcus oeni
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
4202-4204191001knwA2-420crystal structure of
diaminopimelate decarboxylase
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
4201-418418333n2bA1-4121.8 angstrom resolution
crystal structure of
diaminopimelate decarboxylase
(lysa) from vibrio cholerae.
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
4202-4204191001knwA2-420crystal structure of
diaminopimelate decarboxylase
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
4202-4204191001knwA2-420crystal structure of
diaminopimelate decarboxylase
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
4202-4204191001knwA2-420crystal structure of
diaminopimelate decarboxylase
P00861.1dcda_ecoli recname: full=diaminopimelate
decarboxylase; short=dap
decarboxylase
Escherichia coli,
Shigella boydii, etc.
4209-420412281tufA25-443crystal structure of
diaminopimelate decarboxylase
from m. jannaschi