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ModBase: Database of Comparative Protein Structure Models

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Sequence
Database
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Database AnnotationOrganismProtein
Size
Modeled
Segment
SizeSeq
Id(%)
PDB
code
PDB
Segment
PDB Comment
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
4741-474474321e4iA3-4472-deoxy-2-fluoro-beta-d-glucosyl/enzyme
intermediate complex
of the beta-glucosidase
from bacillus polymyxa
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
47464-37130885bcaA22-331beta-amylase from bacillus
cereus var. mycoides
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
4741-474474231uwsA1-476structure of beta-glycosidase
from sulfolobus solfataricus
in complex with 2-deoxy-2-fluoro-glucose
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
4744-36736491eqcA4-379exo-b-(1,3)-glucanase
from candida albicans
in complex with castanospermine
at 1.85 a
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
47464-473410103d3aA50-463crystal structure of
a beta-galactosidase
from bacteroides thetaiotaomicron
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
47617-340324117a3hA1-289native endoglucanase
cel5a catalytic core
domain at 0.95 angstroms
resolution
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
47659-448390121cec11-328a common protein fold
and similar active site
in two distinct families
of beta-glycanases
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
47466-466401141taxA21-301
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
47415-338324117a3hA1-289native endoglucanase
cel5a catalytic core
domain at 0.95 angstroms
resolution
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
4744-465462291h49A24-498crystal strucure of
the inactive double
mutant of the maize
beta-glucosidase zmglu1-e191d-f198v
in complex with dimboa-glucoside
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
47668-465398133clwA69-420crystal structure of
conserved exported protein
from bacteroides fragilis
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
4766-36936491eqcA4-379exo-b-(1,3)-glucanase
from candida albicans
in complex with castanospermine
at 1.85 a
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
4741-473473514f66A1-477
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
4761-469469271e6qM18-498myrosinase from sinapis
alba with the bound
transition state analogue
gluco-tetrazole
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
47653-37031891qnrA17-336the 3-d structure of
a trichoderma reesei
b-mannanase from glycoside
hydrolase family 5
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
4741-473473513pn8A1-477
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
47615-37035671eceA2-358acidothermus cellulolyticus
endocellulase e1 catalytic
domain in complex with
a cellotetraose
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
47466-463398133clwA69-420crystal structure of
conserved exported protein
from bacteroides fragilis
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
4742-473472524iplA2-469
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
47668-47540893clwA69-496crystal structure of
conserved exported protein
from bacteroides fragilis
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
47451-474424123d3aA40-462crystal structure of
a beta-galactosidase
from bacteroides thetaiotaomicron
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
47665-268204111edg53-249single crystal structure
determination of the
catalytic domain of
celcca carried out at
15 degree c
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
4761-476476494gzeE3-478
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
47639-472434103fn9A166-602crystal structure of
putative beta-galactosidase
from bacteroides fragilis
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
4766-472467201qvbA3-469crystal structure of
the beta-glycosidase
from the hyperthermophile
thermosphaera aggregans
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
4763-475473514f66A1-477
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
47670-369300111bqcA29-291beta-mannanase from
thermomonospora fusca
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
47468-367300111bqcA29-291beta-mannanase from
thermomonospora fusca
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
47413-36835671eceA2-358acidothermus cellulolyticus
endocellulase e1 catalytic
domain in complex with
a cellotetraose
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
47466-47340893clwA69-496crystal structure of
conserved exported protein
from bacteroides fragilis
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
476212-396185223fn9A140-322crystal structure of
putative beta-galactosidase
from bacteroides fragilis
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
47668-468401141taxA21-301
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
47463-266204111edg53-249single crystal structure
determination of the
catalytic domain of
celcca carried out at
15 degree c
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
47459-366308151bhgA331-607human beta-glucuronidase
at 2.6 a resolution
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
47451-474424123d3aA40-462crystal structure of
a beta-galactosidase
from bacteroides thetaiotaomicron
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
47659-475417103cmgA191-611crystal structure of
putative beta-galactosidase
from bacteroides fragilis
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
47437-470434103fn9A166-602crystal structure of
putative beta-galactosidase
from bacteroides fragilis
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
47457-473417103cmgA191-611crystal structure of
putative beta-galactosidase
from bacteroides fragilis
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
47451-36831891qnrA17-336the 3-d structure of
a trichoderma reesei
b-mannanase from glycoside
hydrolase family 5
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
4744-470467201qvbA3-469crystal structure of
the beta-glycosidase
from the hyperthermophile
thermosphaera aggregans
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
47457-446390121cec11-328a common protein fold
and similar active site
in two distinct families
of beta-glycanases
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
4762-475474522xhyA4-479
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
4741-472472322cbuA3-445beta-glucosidase from
thermotoga maritima
in complex with castanospermine
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
4741-467467271e6qM20-498myrosinase from sinapis
alba with the bound
transition state analogue
gluco-tetrazole
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
47666-37330885bcaA22-331beta-amylase from bacillus
cereus var. mycoides
A0A069XH07subname: full=glycosyl hydrolase
1 family protein {eco:0000313|embl:kdu29157.1};
Escherichia coli,
Shigella boydii, etc.
4741-474474241uwsA1-473structure of beta-glycosidase
from sulfolobus solfataricus
in complex with 2-deoxy-2-fluoro-glucose
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
47661-368308151bhgA331-607human beta-glucuronidase
at 2.6 a resolution
8826096-phospho-beta-glucosidaseEscherichia coli,
Escherichia coli H386,
etc.
47653-476424123d3aA40-462crystal structure of
a beta-galactosidase
from bacteroides thetaiotaomicron