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ModBase: Database of Comparative Protein Structure Models

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TARGETMODEL DATATEMPLATE
Model
Icon 		Model/Fold
Reliability 		Sequence
Database
Link 		Database AnnotationOrganismProtein
Size		Modeled
Segment		SizeSeq
Id(%)		PDB
code		PDB
Segment		PDB Comment
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2452-9089604gj1A4-92
41713unnamed protein productEscherichia coli24530-245216131rpxA24-226d-ribulose-5-phosphate
3-epimerase from solanum
tuberosum chloroplasts
41713unnamed protein productEscherichia coli245191-22939211wv2A1182-1220crystal structure of
thiamine biosynthesis
protein from pseudomonas
aeruginosa
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		24530-245216131rpxA24-226d-ribulose-5-phosphate
3-epimerase from solanum
tuberosum chloroplasts
41713unnamed protein productEscherichia coli24530-238209131dvjB10-202crystal structure of
orotidine monophosphate
decarboxylase complexed
with 6-azaump
41713unnamed protein productEscherichia coli2452-244243494gj1A4-243
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2452-244243281ka9F7-244imidazole glycerol phosphate
synthase
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		245191-22939211wv2A1182-1220crystal structure of
thiamine biosynthesis
protein from pseudomonas
aeruginosa
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		24530-238209131gox107-312refined structure of
spinach glycolate oxidase
at 2 angstroms resolution
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2452-223222321h5yA7-225hisf protein from pyrobaculum
aerophilum
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		24574-240167171eepA104-2602.4 a resolution crystal
structure of borrelia
burgdorferi inosine
5'-monphosphate dehydrogenase
in complex with a sulfate
ion
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2452-245244251h5yA7-247hisf protein from pyrobaculum
aerophilum
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2451-242242121kbiA202-454crystallographic study
of the recombinant flavin-binding
domain of baker's yeast
flavocytochrome b2:
comparison with the
intact wild-type enzyme
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		24530-240211161eunA28-198structure of 2-keto-3-deoxy-6-phosphogluconate
aldolase from escherichia
coli
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2451-244244322y88A5-245
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2451-240240101to3A16-267structure of yiht from
salmonella typhimurium
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2452-241240121pii39-252three-dimensional structure
of the bifunctional
enzyme phosphoribosylanthranilate
isomerase: indoleglycerolphosphate
synthase from escherichia
coli refined at 2.0
angstroms resolution
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2451-245245141b3oA36-463ternary complex of human
type-ii inosine monophosphate
dehydrogenase with 6-cl-imp
and selenazole adenine
dinucleotide
41713unnamed protein productEscherichia coli2452-240239101ak536-261inosine monophosphate
dehydrogenase (impdh)
from tritrichomonas
foetus
41713unnamed protein productEscherichia coli2452-129128161ep3A171-297crystal structure of
lactococcus lactis dihydroorotate
dehydrogenase b. data
collected under cryogenic
conditions.
41713unnamed protein productEscherichia coli24530-238209131gox107-312refined structure of
spinach glycolate oxidase
at 2 angstroms resolution
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2452-244243504gj1A4-243
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2452-240239241thfD6-239cyclase subunit of imidazoleglycerolphosphate
synthase from thermotoga
maritima
41713unnamed protein productEscherichia coli2452-240239241thfD6-239cyclase subunit of imidazoleglycerolphosphate
synthase from thermotoga
maritima
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2452-129128161ep3A171-297crystal structure of
lactococcus lactis dihydroorotate
dehydrogenase b. data
collected under cryogenic
conditions.
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2451-240240271qo2A2-238crystal structure of
n-((5'-phosphoribosyl)-formimino)-5-aminoimidazol-4-carboxamid
ribonucleotid isomerase
(ec 3.1.3.15., hisa)
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		24529-11385191wv2A1143-1227crystal structure of
thiamine biosynthesis
protein from pseudomonas
aeruginosa
41713unnamed protein productEscherichia coli24574-240167171eepA104-2602.4 a resolution crystal
structure of borrelia
burgdorferi inosine
5'-monphosphate dehydrogenase
in complex with a sulfate
ion
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		24530-238209172tpsA31-212thiamin phosphate synthase
41713unnamed protein productEscherichia coli24530-240211161eunA28-198structure of 2-keto-3-deoxy-6-phosphogluconate
aldolase from escherichia
coli
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2451-244244935a5wA1-244
41713unnamed protein productEscherichia coli2451-240240271qo2A2-238crystal structure of
n-((5'-phosphoribosyl)-formimino)-5-aminoimidazol-4-carboxamid
ribonucleotid isomerase
(ec 3.1.3.15., hisa)
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2452-240239131a5336-246complex of indole-3-glycerolphosphate
synthase from sulfolobus
solfataricus with indole-3-glycerolphosphate
at 2.0 a resolution
41713unnamed protein productEscherichia coli2452-240239131a5336-246complex of indole-3-glycerolphosphate
synthase from sulfolobus
solfataricus with indole-3-glycerolphosphate
at 2.0 a resolution
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2452-243242251thfD6-242cyclase subunit of imidazoleglycerolphosphate
synthase from thermotoga
maritima
41713unnamed protein productEscherichia coli2452-223222321h5yA7-225hisf protein from pyrobaculum
aerophilum
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		24571-11040421w0mA171-210triosephosphate isomerase
from thermoproteus tenax
41713unnamed protein productEscherichia coli24530-238209172tpsA31-212thiamin phosphate synthase
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		24530-238209131dvjB10-202crystal structure of
orotidine monophosphate
decarboxylase complexed
with 6-azaump
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		24575-229155133ktsA7-181crystal structure of
glycerol uptake operon
antiterminator regulatory
protein from listeria
monocytogenes str. 4b
f2365
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		24562-11049201to3A208-260structure of yiht from
salmonella typhimurium
41713unnamed protein productEscherichia coli2452-241240121pii39-252three-dimensional structure
of the bifunctional
enzyme phosphoribosylanthranilate
isomerase: indoleglycerolphosphate
synthase from escherichia
coli refined at 2.0
angstroms resolution
41713unnamed protein productEscherichia coli24529-11385201wv2A1143-1227crystal structure of
thiamine biosynthesis
protein from pseudomonas
aeruginosa
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2452-245244281ka9F7-245imidazole glycerol phosphate
synthase
A0A086TYR8recname: full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
i midazole-4-carboxamide
isomerase {eco:0000256|hamap-rule:mf_01014,
eco:0000256|rulebase:ru003658};ec=5.3.1.16
{eco:00002		Escherichia coli,
Escherichia coli K-12,
etc.		2451-240240271qo2A2-238crystal structure of
n-((5'-phosphoribosyl)-formimino)-5-aminoimidazol-4-carboxamid
ribonucleotid isomerase
(ec 3.1.3.15., hisa)