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ModBase Statistics
 
Current Modbase Version 7,127,257 Reliable Models or Fold
Assignments for domains in 1.869,571 proteins.
 
Last Update on 04/17/2009.
Genome Modeling Results
Organism # transcripts  #sequences modeled  # models  % sequences modeled
Cryptosporidium hominis 3886    3287  41.53%
Cryptosporidium parvum 3806  1918  3969  50.39%
Leishmania major 8274  3975  8285  48.04%
Trypanosoma cruzi 19607  7390  14858  37.69%
Mycobacterium leprae 1605  1178  2493  73.40%
Mycobacterium tuberculosis 3991  2808  5913  70.36%
Plasmodium falciparum 5363  2599  5053  48.46%
Trypanosoma brucei 9210  3900  8054  42.35%
Plasmodium vivax 5342  2359  4670  44.16%
Toxoplasma gondii 7793  1530  3064  19.63%
Homo sapiens 32010  21270  51084  66.45%
Drosophila melanogaster 17104  9381  24683  54.8%
Escherichia coli 4206  3150  5994  74.9%
Saccharomyces cerevisiae 6600  3035  5543  45.9%
Mycoplasma pneumoniae 687  425  857  61.9%
Pseudomonas aeruginosa 5559  3806  9222  68.5%
Canis familiaris 30264  22614  65617  74.7%
Query Sequences
Unique sequences processed 2,800,753 (2,476,262 in academic datasets)
Source Uniprot-sprot,uniprot-trembl, uniprot-varsplic
plus various genomes and updates through Apr, 2009.
Average length of modeled sequences 514 amino acids
Average model length 264 amino acids
Template Structures
Source PDB Apr 2009
Average length 322 amino acids
Structures used as templates 29,467
Models
Reliable Models or Fold Assignments 7,127,257 (5,222,507 in academic datasets)
Sequences with Reliable Models or Fold Assignments 1,869,571 (1,674,578 in academic datasets)