University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 21730362
Original Database ID GI 21730362
Organism Escherichia coli
Annotation p chain p, trpc stability mutant
containing an engineered disulphide
bridge and in complex with a
cdrp-related substrate
Sequence Length 259

Dataset Information:

The newest dataset for this sequence was created on 2013-06-24. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region1-250
Protein Length259
Template PDB Code1qpoA
Template Region27-283
Sequence Identity9%
E-Value5e-20
GA3410.02
DatasetTIMbarrel_templates
ModPipe VersionModPipe1.0
Model Date2003-05-28

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1qpoquinolinate phosphoribosyl transferase (qaprtase) apo-enzyme from mycobacterium tuberculosis ; EC: 2.4.2.19 ; PFAM: PF01729 PF02749 ; SCOP: 29561 38597
DBALI1qpoA 
CATH3.90.1170.20 Domain: 1qpoA01 Aldehyde Oxidoreductase; domain 3 (98%)
CATH3.20.20.70 Domain: 1qpoA02 Aldolase class I (100%)
JenaImageLibrary1qpo 
Target Sequence
PDB1JCMP Chain P, Trpc Stability Mutant Containing An Engineered Disulphide Bridge And In Complex With A Cdrp-Related Substrate
PDB1JCMPChain P, Trpc Stability Mutant Containing An Engineered Disulphide Bridge And In Complex With A Cdrp-Related Substrate
GenPept21730362P Chain P, Trpc Stability Mutant Containing An Engineered Disulphide Bridge And In Complex With A Cdrp-Related Substrate