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Sequence Information
Primary Database Link Q8G534 (DEF1_BIFLO )
Original Database ID TR DEF1_BIFLO
Organism Bifidobacterium longum DJO10A, Bifidobacterium longum NCC2705, etc.
Annotation peptide deformylase 1 (ec 3.5.1.88) (pdf 1) (polypeptide deformylase1).
Sequence Length 217
Model Information
 
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Sequence Model Coverage
Sequence Identity36.00%
E-Value2e-41
Model Score1.00
Target Region28-197
Protein Length217
Template PDB Code1rn5A
Template Region2-170
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
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Cross-references
Template Structure
PDB 1rn5 mol_id: 1; molecule: peptide deformylase; chain: a, b; synonym: lipdf; ec: 3.5.1.88; engineered: yes
DBALI 1rn5A  
CATH 3.90.45.10 Domain: 1rn5A00 Peptide Deformylase (95%)
JenaImageLibrary 1rn5  
Target Sequence
UniProtKB B3DTC1 RecName: Full=Peptide deformylase;
UniProtKB B3DTC1  
InterPro B3DTC1  
PFAM B3DTC1  
Prodom B3DTC1  
UniProtKB C2GUU1 RecName: Full=Peptide deformylase;
UniProtKB C2GUU1  
InterPro C2GUU1  
PFAM C2GUU1  
Prodom C2GUU1  
UniProtKB C5E833 RecName: Full=Peptide deformylase;
UniProtKB C5E833  
InterPro C5E833  
PFAM C5E833  
Prodom C5E833  
UniProtKB Q8G534 RecName: Full=Peptide deformylase 1;Short=PDF 1;EC=3.5.1.88;AltName: Full=Polypeptide deformylase 1;
UniProtKB Q8G534  
InterPro Q8G534  
PFAM Q8G534  
Prodom Q8G534  
UniProtKB Q8G534.1 DEF1_BIFLO RecName: Full=Peptide deformylase 1; Short=PDF 1; AltName: Full=Polypeptide deformylase 1
UniProtKB Q8G534.1  
InterPro Q8G534.1  
PFAM Q8G534.1  
Prodom Q8G534.1  
RefSeq YP_001954888.1 peptide deformylase [Bifidobacterium longum DJO10A]
RefSeq NP_696355.1 peptide deformylase [Bifidobacterium longum NCC2705]
RefSeq ZP_00120599.1 COG0242: N-formylmethionyl-tRNA deformylase [Bifidobacterium longum DJO10A]
RefSeq ZP_03976414.1 peptide deformylase [Bifidobacterium longum subsp. infantis ATCC 55813]
RefSeq ZP_04665398.1 peptide deformylase [Bifidobacterium longum subsp. infantis CCUG 52486]
GenPept 189428242 N-formylmethionyl-tRNA deformylase [Bifidobacterium longum DJO10A]
GenPept 189439807 peptide deformylase [Bifidobacterium longum DJO10A]
GenPept 227213346 peptide deformylase [Bifidobacterium longum subsp. infantis ATCC 55813]
GenPept 227546365 peptide deformylase [Bifidobacterium longum subsp. infantis ATCC 55813]
GenPept 23326438 polypeptide deformylase [Bifidobacterium longum NCC2705]
GenPept 23335362 COG0242: N-formylmethionyl-tRNA deformylase [Bifidobacterium longum DJO10A]
GenPept 23465752 peptide deformylase [Bifidobacterium longum NCC2705]
GenPept 239514364 peptide deformylase [Bifidobacterium longum subsp. infantis CCUG 52486]
GenPept 239622367 peptide deformylase [Bifidobacterium longum subsp. infantis CCUG 52486]
GenPept 39931158 DEF1_BIFLO RecName: Full=Peptide deformylase 1; Short=PDF 1; AltName: Full=Polypeptide deformylase 1
GenBank EEQ54231.1 peptide deformylase [Bifidobacterium longum subsp. infantis CCUG 52486]
GenBank EEI81218.1 peptide deformylase [Bifidobacterium longum subsp. infantis ATCC 55813]
GenBank ACD98390.1 N-formylmethionyl-tRNA deformylase [Bifidobacterium longum DJO10A]
GenBank AAN24991.1 polypeptide deformylase [Bifidobacterium longum NCC2705]