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ModBase: Database of Comparative Protein Structure Models

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Database AnnotationOrganismProtein
Size
Modeled
Segment
SizeSeq
Id(%)
PDB
code
PDB
Segment
PDB Comment
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4651-462462121ejxA1062-1513crystal structure of
wild-type klebsiella
aerogenes urease at
100k
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4651-450450151po9A4-386crytsal structure of
isoaspartyl dipeptidase
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4613-418416142gokA19-416crystal structure of
the imidazolonepropionase
from agrobacterium tumefaciens
at 1.87 a resolution
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4656-401396131un7A4-374
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
46142-380339131i0bA38-364high resolution structure
of the manganese-containing
phosphotriesterase from
pseudomonas diminuta
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4613-461459371gkpA3-458d-hydantoinase (dihydropyrimidinase)
from thermus sp. in
space group c2221
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4654-462459123ubpC66-516diamidophosphate inhibited
bacillus pasteurii urease
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4656-447442132ogjA16-395crystal structure of
a dihydroorotase
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4614-453450141p1mA2-395structure of the hypothetical
protein tm0936 from
thermotoga maritima
at 1.5a bound to ni
and methionine
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-446446131onwA8-386crystal structure of
isoaspartyl dipeptidase
from e. coli
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
46147-427381141j79A4-346molecular structure
of dihydroorotase: a
paradigm for catalysis
through the use of a
binuclear metal center
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4614-396393143etkA37-497
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4613-453451173h4uA31-466
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-458458141e9zB66-515crystal structure of
helicobacter pylori
urease
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
46546-380335131pta38-360three-dimensional structure
of phosphotriesterase:
an enzyme capable of
detoxifying organophosphate
nerve agents
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
46147-427381161j79A4-346molecular structure
of dihydroorotase: a
paradigm for catalysis
through the use of a
binuclear metal center
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4651-450450141onxA4-386crystal structure of
isoaspartyl dipeptidase
from escherichia coli
complexed with aspartate
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-457457401k1dA1-459crystal structure of
d-hydantoinase
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4656-443438142r8cA3-413crystal structure of
uncharacterized protein
eaj56179
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
46142-376335141pta3-316three-dimensional structure
of phosphotriesterase:
an enzyme capable of
detoxifying organophosphate
nerve agents
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4655-460456391nfgA1-455structure of d-hydantoinase
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4612-453452291gkrA3-451l-hydantoinase (dihydropyrimidinase)
from arthrobacter aurescens
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4613-436434152icsA7-370crystal structure of
an adenine deaminase
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-458458131fweC66-513klebsiella aerogenes
urease, c319a variant
with acetohydroxamic
acid (aha) bound
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4657-457451161rk6A10-480the enzyme in complex
with 50mm cdcl2
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4612-456455321kcxA16-474x-ray structure of nysgrc
target t-45
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
46114-256243101ndwA19-288crystal structure of
adenosine deaminase
complexed with fr221647
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
46130-390361111ndwA17-349crystal structure of
adenosine deaminase
complexed with fr221647
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4651-462462141e9zB62-515crystal structure of
helicobacter pylori
urease
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4651-462462131e9yB62-515crystal structure of
helicobacter pylori
urease in complex with
acetohydroxamic acid
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
46142-376335131pta38-360three-dimensional structure
of phosphotriesterase:
an enzyme capable of
detoxifying organophosphate
nerve agents
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4654-462459144ubpC66-516structure of bacillus
pasteurii urease inhibited
with acetohydroxamic
acid at 1.55 a resolution
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4654-462459131e9yB65-515crystal structure of
helicobacter pylori
urease in complex with
acetohydroxamic acid
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
46515-394380121krmA13-346crystal structure of
bovine adenosine deaminase
complexed with 6-hydroxyl-1,6-dihydropurine
riboside
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-461461151e9yB66-479crystal structure of
helicobacter pylori
urease in complex with
acetohydroxamic acid
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4651-462462131ejwC1062-1513crystal structure of
wild-type klebsiella
aerogenes urease at
298k
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4614-396393163ighX21-488crystal structure of
an uncharacterized metal-dependent
hydrolase from pyrococcus
horikoshii ot3
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-443443132qt3A5-403crystal structure of
n-isopropylammelide
isopropylaminohydrolase
atzc from pseudomonas
sp. strain adp complexed
with zn
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4656-422417132oofA6-402the crystal structure
of 4-imidazolone-5-propanoate
amidohydrolase from
environmental sample
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
46111-390380101krmA13-346crystal structure of
bovine adenosine deaminase
complexed with 6-hydroxyl-1,6-dihydropurine
riboside
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
46515-394380121w1iE16-354crystal structure of
dipeptidyl peptidase
iv (dppiv or cd26) in
complex with adenosine
deaminase
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4613-397395131o12A1-347crystal structure of
n-acetylglucosamine-6-phosphate
deacetylase (tm0814)
from thermotoga maritima
at 2.5 a resolution
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-456456411k1dA1-458crystal structure of
d-hydantoinase
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4611-460460302ftyA4-533crystal structure of
dihydropyrimidinase
from saccharomyces kluyveri
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4614-402399153feqA5-386crystal structure of
uncharacterized protein
eah89906
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4612-460459351kcxA16-478x-ray structure of nysgrc
target t-45
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4613-439437142ogjA17-391crystal structure of
a dihydroorotase
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4612-453452281gkrA3-451l-hydantoinase (dihydropyrimidinase)
from arthrobacter aurescens
Q46806hypothetical 51.5 kda protein
in pbl-lyss intergenic region
Escherichia coli,
Escherichia coli K-12
4658-457450131p1mA2-395structure of the hypothetical
protein tm0936 from
thermotoga maritima
at 1.5a bound to ni
and methionine
A0A094VUQ1recname: full=d-phenylhydantoinase
{eco:0000256|hamap-rule:mf_01644};ec=3.5.2.-
{eco:0000256|hamap-rule:mf_01644};altname:
full=hydantoin-utilizing
enzyme hyua {eco:0000256|hamap-rule:mf_01644};
Escherichia coli,
Escherichia coli K-12,
etc.
4613-453451142plmA1-395crystal structure of
the protein tm0936 from
thermotoga maritima
complexed with zn and
s-inosylhomocysteine