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ModBase: Database of Comparative Protein Structure Models

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TARGETMODEL DATATEMPLATE
Model
Icon 		Model/Fold
Reliability 		Sequence
Database
Link 		Database AnnotationOrganismProtein
Size		Modeled
Segment		SizeSeq
Id(%)		PDB
code		PDB
Segment		PDB Comment
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		38215-382368213nxlA42-464crystal structure of
glucarate dehydratase
from burkholderia cepacia
complexed with magnesium
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		38218-350333292ps2A39-356crystal structure of
putative mandelate racemase/muconate
lactonizing enzyme from
aspergillus oryzae
290541similar to p. putida sugar
metabolism enzymes		Escherichia coli58714-133120142nqlA217-342crystal structure of
a member of the enolase
superfamily from agrobacterium
tumefaciens
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		38218-361344263i6tA40-368crystal structure of
muconate cycloisomerase
from jannaschia sp.
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-371371182hneA2-434crystal structure of
l-fuconate dehydratase
from xanthomonas campestris
pv. campestris str.
atcc 33913
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		38220-357338263nxlA47-427crystal structure of
glucarate dehydratase
from burkholderia cepacia
complexed with magnesium
290541similar to p. putida sugar
metabolism enzymes		Escherichia coli587206-576371182hneA2-434crystal structure of
l-fuconate dehydratase
from xanthomonas campestris
pv. campestris str.
atcc 33913
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		38223-366344273n6jA47-420crystal structure of
mandelate racemase/muconate
lactonizing protein
from actinobacillus
succinogenes 130z
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		38218-354337303mkcA34-380crystal structure of
a putative racemase
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		38255-378324162opjA13-310crystal structure of
o-succinylbenzoate synthase
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-360360302ox4A1-385crystal structure of
putative dehydratase
from zymomonas mobilis
zm4
290541similar to p. putida sugar
metabolism enzymes		Escherichia coli587260-583324162opjA13-310crystal structure of
o-succinylbenzoate synthase
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-368368222qgyA6-378crystal structure of
an enolase from the
environmental genome
shotgun sequencing of
the sargasso sea
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3827-360354143cawA10-325crystal structure of
o-succinylbenzoate synthase
from bdellovibrio bacteriovorus
liganded with mg
290541similar to p. putida sugar
metabolism enzymes		Escherichia coli587206-566361302pozA3-379crystal structure of
a putative dehydratase
from mesorhizobium loti
290541similar to p. putida sugar
metabolism enzymes		Escherichia coli587205-565361223fcpA4-370crystal structure of
muconate lactonizing
enzyme from klebsiella
pneumoniae
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-362362212pceA1-370crystal structure of
putative mandelate racemase/muconate
lactonizing enzyme from
roseovarius nubinhibens
ism
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-354354203r0kA3-359
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3823-339337171te6A2-425crystal structure of
human neuron specific
enolase at 1.8 angstrom
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-360360203eezA1-363crystal structure of
a putative mandelate
racemase/muconate lactonizing
enzyme from silicibacter
pomeroyi
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-354354283eezA1-357crystal structure of
a putative mandelate
racemase/muconate lactonizing
enzyme from silicibacter
pomeroyi
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3822-370369243dipA3-400crystal structure of
an enolase protein from
the environmental genome
shotgun sequencing of
the sargasso sea
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		38215-361347262ovlA33-361crystal structure of
a racemase from streptomyces
coelicolor a3(2)
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-367367202qyeA1-366
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-362362181wueA1001-1362crystal structure of
protein gi:29375081,
unknown member of enolase
superfamily from enterococcus
faecalis v583
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		38214-382369293gy1A22-401crystal structure of
putative mandelate racemase/muconate
lactonizing protein
from clostridium beijerinckii
ncimb 8052
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-379379201ec7A8-427e. coli glucarate dehydratase
native enzyme
290541similar to p. putida sugar
metabolism enzymes		Escherichia coli587195-583389263h12A10-392crystal structure of
putative mandelate racemase
from bordetella bronchiseptica
rb50
290541similar to p. putida sugar
metabolism enzymes		Escherichia coli587207-567361231mucA2-360structure of muconate
lactonizing enzyme at
1.85 angstroms resolution
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-360360313dfhA3-379crystal structure of
putative mandelate racemase
/ muconate lactonizing
enzyme from vibrionales
bacterium swat-3
290541similar to p. putida sugar
metabolism enzymes		Escherichia coli587219-575357242p0iA64-406crystal structure of
l-rhamnonate dehydratase
from gibberella zeae
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-361361223i6tA6-368crystal structure of
muconate cycloisomerase
from jannaschia sp.
290541similar to p. putida sugar
metabolism enzymes		Escherichia coli587206-565360273bjsA37-406crystal structure of
a member of enolase
superfamily from polaromonas
sp. js666
290541similar to p. putida sugar
metabolism enzymes		Escherichia coli58714-130117142gshA229-353crystal structure of
l-rhamnonate dehydratase
from salmonella typhimurium
290541similar to p. putida sugar
metabolism enzymes		Escherichia coli587220-565346232i5qA69-401crystal structure of
apo l-rhamnonate dehydratase
from escherichia coli
290541similar to p. putida sugar
metabolism enzymes		Escherichia coli587206-565360233ct2A6-372crystal structure of
muconate cycloisomerase
from pseudomonas fluorescens
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		38218-359342273mznA36-404crystal structure of
probable glucarate dehydratase
from chromohalobacter
salexigens dsm 3043
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-357357142oktA1-330crystal structure of
o-succinylbenzoic acid
synthetase from staphylococcus
aureus, ligand-free
form
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		38218-272255211wufA1034-1277crystal structure of
protein gi:16801725,
member of enolase superfamily
from listeria innocua
clip11262
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-360360302gl5A1-394crystal structure of
putative dehydratase
from salmonella thyphimurium
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-372372231yeyA2-430crystal structure of
l-fuconate dehydratase
from xanthomonas campestris
pv. campestris str.
atcc 33913
290541similar to p. putida sugar
metabolism enzymes		Escherichia coli587206-567362302o56A2-393crystal structure of
a member of the enolase
superfamily from salmonella
typhimurium
290541similar to p. putida sugar
metabolism enzymes		Escherichia coli587219-567349272nqlA51-387crystal structure of
a member of the enolase
superfamily from agrobacterium
tumefaciens
290541similar to p. putida sugar
metabolism enzymes		Escherichia coli587205-565361292gl5A0-394crystal structure of
putative dehydratase
from salmonella thyphimurium
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-362362212oo6A1-387crystal structure of
putative l-alanine-dl-glutamate
epimerase from burkholderia
xenovorans strain lb400
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-361361201wueA1001-1361crystal structure of
protein gi:29375081,
unknown member of enolase
superfamily from enterococcus
faecalis v583
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		3821-368368222hneA2-428crystal structure of
l-fuconate dehydratase
from xanthomonas campestris
pv. campestris str.
atcc 33913
290541similar to p. putida sugar
metabolism enzymes		Escherichia coli58716-231216121pii64-291three-dimensional structure
of the bifunctional
enzyme phosphoribosylanthranilate
isomerase: indoleglycerolphosphate
synthase from escherichia
coli refined at 2.0
angstroms resolution
290541similar to p. putida sugar
metabolism enzymes		Escherichia coli58714-128115162oz3A217-340crystal structure of
l-rhamnonate dehydratase
from azotobacter vinelandii
Q6BF17galactonate dehydratase (ec
4.2.1.6)		Escherichia coli,
Escherichia fergusonii,
etc.		38216-285270312i5qA70-329crystal structure of
apo l-rhamnonate dehydratase
from escherichia coli