SALIGN Webserver






Developers:

Hannes Braberg
M.S. Madhusudhan
Ursula Pieper
Ben Webb
Elina Tjioe
Andrej Sali


SALIGN: A multiple protein sequence/structure alignment server.

SALIGN is a general alignment module of the modeling program MODELLER. The alignments are computed using dynamic programming, making use of several features of the protein sequences and structures. SALIGN benchmarks from published papers are also available.

General information

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Users can either upload their own sequences/structures to align or choose structures from the PDB.

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SALIGN : A webserver for alignment of multiple protein sequences and structures. Bioinformatics 2012; doi: 10.1093/bioinformatics/bts302.
Hannes Braberg, Ben Webb, Elina Tjioe, Ursula Pieper, Andrej Sali, Mallur S. Madhusudhan. PDF