SALIGN Webserver






Developers:

Hannes Braberg
M.S. Madhusudhan
Ursula Pieper
Ben Webb
Elina Tjioe
Andrej Sali


SALIGN: A multiple protein sequence/structure alignment server.

SALIGN is a general alignment module of the modeling program MODELLER. The alignments are computed using dynamic programming, making use of several features of the protein sequences and structures. SALIGN benchmarks from published papers are also available.

General information

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Input alignment information

Users can either upload their own sequences/structures to align or choose structures from the PDB.

Paste one sequence at a time, without header help

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SALIGN : A webserver for alignment of multiple protein sequences and structures.
Hannes Braberg, Ben Webb, Elina Tjioe, Ursula Pieper, Andrej Sali, Mallur S. Madhusudhan.