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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P49638
Original Database ID EN ENSP00000260116.4
Organism Homo sapiens
Annotation recname: full=alpha-tocopherol
transfer protein;short=alpha-ttp;
Sequence Length 278

Dataset Information:

The newest dataset for this sequence was created on 2016-06-12. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region9-274
Protein Length278
Template PDB Code1oizA
Template Region9-274
Sequence Identity100.00%
E-Value0
GA3411.00
MPQS2.21393
z-DOPE-1.62
TSVMod MethodMTALL
TSVMod RMSD0.156
TSVMod NO350.996
DatasetMW-Human_D11
ModPipe VersionSVN.r1600
Model Date2016-06-12

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Cross-references

Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1oizthe molecular basis of vitamin e retention: structure of human alpha-tocopherol transfer protein
DBALI1oizA 
JenaImageLibrary1oiz 
Target Sequence
UniProtKBQ71V64RecName: Full=Alpha-tocopherol transfer protein;Short=Alpha-TTP;
UniProtKBQ71V64 
PSI Structural Biology KnowledgebaseQ71V64 
Protein Model PortalQ71V64 
InterProQ71V64 
PFAMQ71V64 
ProdomQ71V64 
UniProtKBP49638RecName: Full=Alpha-tocopherol transfer protein;Short=Alpha-TTP;
UniProtKBP49638 
PSI Structural Biology KnowledgebaseP49638 
Protein Model PortalP49638 
InterProP49638 
PFAMP49638 
ProdomP49638 
UniProtKBQ71V64RecName: Full=Alpha-tocopherol transfer protein;Short=Alpha-TTP;
UniProtKBQ71V64 
PSI Structural Biology KnowledgebaseQ71V64 
Protein Model PortalQ71V64 
InterProQ71V64 
PFAMQ71V64 
ProdomQ71V64 
UniProtKBP49638RecName: Full=Alpha-tocopherol transfer protein;Short=Alpha-TTP;
UniProtKBP49638 
PSI Structural Biology KnowledgebaseP49638 
Protein Model PortalP49638 
InterProP49638 
PFAMP49638 
ProdomP49638 
UniProtKBP49638.1TTPA_HUMAN RecName: Full=Alpha-tocopherol transfer protein; Short=Alpha-TTP
UniProtKBP49638.1 
PSI Structural Biology KnowledgebaseP49638.1 
Protein Model PortalP49638.1 
InterProP49638.1 
PFAMP49638.1 
ProdomP49638.1 
RefSeqNP_000361.1 alpha-tocopherol transfer protein [Homo sapiens]
PDB1OIZBChain B, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-Tocopherol Transfer Protein
PDB1OIZAChain A, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-Tocopherol Transfer Protein
PDB1OIZB Chain B, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-Tocopherol Transfer Protein
PDB1OIPAChain A, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-tocopherol Transfer Protein
PDB1OIPA Chain A, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-Tocopherol Transfer Protein
GenPept699601alpha-tocopherol transfer protein
GenPept568558896Sequence 56305 from patent US 8586006
GenPept4507723 alpha-tocopherol transfer protein [Homo sapiens]
GenPept1351322TTPA_HUMAN RecName: Full=Alpha-tocopherol transfer protein; Short=Alpha-TTP
GenPept312151170tocopherol (alpha) transfer protein (ataxia (Friedreich-like) with vitamin E deficiency), partial
GenPept37046648Tocopherol (alpha) transfer protein
GenPept42543201A Chain A, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-tocopherol Transfer Protein
GenPept42543205A Chain A, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-Tocopherol Transfer Protein
GenPept42543206B Chain B, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-Tocopherol Transfer Protein
GenPept1082197S54352 alpha-tocopherol transfer protein - human
GenBankAAH58000.1 Tocopherol (alpha) transfer protein [Homo sapiens]
ENSEMBLENSP00000260116Alpha-tocopherol transfer protein (Alpha-TTP). [Homo sapiens]
UCSCGenomeBrowserP49638 
ENSEMBLENSP00000260116 
ENSEMBLENSP00000260116TDI sequence
NP_000361.1 
ENSEMBLENSP00000260116