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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A024R8Z9
Original Database ID EN ENSP00000355086.4
Organism Homo sapiens
Annotation subname: full=aspartyl-trna synthetase
2 (mitochondrial), isoform cra_b
{eco:000 0313|embl:eaw90961.1};
Sequence Length 645

Dataset Information:

The newest dataset for this sequence was created on 2016-06-12. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region42-630
Protein Length645
Template PDB Code4ah6A
Template Region42-630
Sequence Identity100.00%
E-Value0
GA3411.00
MPQS2.03088
z-DOPE-0.28
TSVMod MethodMSALL
TSVMod RMSD4.289
TSVMod NO350.984
DatasetMW-Human_D11
ModPipe VersionSVN.r1600
Model Date2016-06-12

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Cross-references

Mutation Data
LS-Mut Somatic mutation found in glioblastoma multiforme for CCDS1311.1 E277G
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB4ah6
DBALI4ah6A 
JenaImageLibrary4ah6 
Target Sequence
UniProtKBA0A024R8Z9SubName: Full=Aspartyl-tRNA synthetase 2 (Mitochondrial), isoform CRA_b {ECO:0000313|EMBL:EAW90961.1};
UniProtKBA0A024R8Z9 
PSI Structural Biology KnowledgebaseA0A024R8Z9 
Protein Model PortalA0A024R8Z9 
InterProA0A024R8Z9 
PFAMA0A024R8Z9 
ProdomA0A024R8Z9 
UniProtKBQ6PI48RecName: Full=Aspartate--tRNA ligase, mitochondrial;EC=6.1.1.12;AltName: Full=Aspartyl-tRNA synthetase;Short=AspRS;Flags: Precursor;
UniProtKBQ6PI48 
PSI Structural Biology KnowledgebaseQ6PI48 
Protein Model PortalQ6PI48 
InterProQ6PI48 
PFAMQ6PI48 
ProdomQ6PI48 
UniProtKBQ6PI48DARS2 protein (Novel protein)
UniProtKBQ6PI48 
PSI Structural Biology KnowledgebaseQ6PI48 
Protein Model PortalQ6PI48 
InterProQ6PI48 
PFAMQ6PI48 
ProdomQ6PI48 
UniProtKBQ6PI48.1SYDM_HUMAN RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName: Full=Aspartate--tRNA ligase; Short=AspRS; Flags: Precursor
UniProtKBQ6PI48.1 
PSI Structural Biology KnowledgebaseQ6PI48.1 
Protein Model PortalQ6PI48.1 
InterProQ6PI48.1 
PFAMQ6PI48.1 
ProdomQ6PI48.1 
UniProtKBQ6PI48RecName: Full=Aspartate--tRNA ligase, mitochondrial;EC=6.1.1.12;AltName: Full=Aspartyl-tRNA synthetase;Short=AspRS;Flags: Precursor;
UniProtKBQ6PI48 
PSI Structural Biology KnowledgebaseQ6PI48 
Protein Model PortalQ6PI48 
InterProQ6PI48 
PFAMQ6PI48 
ProdomQ6PI48 
RefSeqNP_060592.2 aspartyl-tRNA synthetase, mitochondrial precursor [Homo sapiens]
GenPept74758347SYDM_HUMAN RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName: Full=Aspartate--tRNA ligase; Short=AspRS; Flags: Precursor
GenPept649109769DARS2, partial
GenPept568532409Sequence 15605 from patent US 8586006
GenPept56203852aspartyl-tRNA synthetase 2, mitochondrial
GenPept40789249 aspartyl-tRNA synthetase, mitochondrial precursor [Homo sapiens]
GenPept119611368aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b
GenPept281037648Sequence 1805 from patent US 7608413
GenPept281037649Sequence 1806 from patent US 7608413
GenPept314881819Sequence 2061 from patent US 7842467
GenPept119611367aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b
GenPept314881820Sequence 2062 from patent US 7842467
GenPept344968999Sequence 1805 from patent US 7998689
GenPept344969000Sequence 1806 from patent US 7998689
GenPept34783643DARS2 protein
GenBankAAH45173.1 DARS2 protein [Homo sapiens]
GenBankEAW90962.1 aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b [Homo sapiens]
GenBankEAW90961.1 aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b [Homo sapiens]
ENSEMBLENSP00000354704Ensembl Family: AMBIGUOUS [Homo sapiens]
EMBLCAI20380.1 
UCSCGenomeBrowserQ6PI48 
ENSEMBLENSP00000354704 
ENSEMBLENSP00000354704TDI sequence
NP_060592.2 
ENSEMBLENSP00000355086