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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q9BSV6.1
Original Database ID EN ENSP00000480899.1
Organism Gorilla gorilla gorilla, Pan troglodytes, etc.
Annotation sen34_human recname: full=trna-splicing
endonuclease subunit sen34; altname:
ful l=leukocyte receptor cluster
member 5; altname: full=trna-intron
endo ...
Sequence Length 310

Dataset Information:

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Model Information

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Target Region162-309
Protein Length310
Template PDB Code2cv8B
Template Region34-180
Sequence Identity26.00%
E-Value0
GA3410.94
MPQS0.804419
z-DOPE-0.01
TSVMod MethodMSALL
TSVMod RMSD5.393
TSVMod NO350.648
DatasetMW-Human_D11
ModPipe VersionSVN.r1600
Model Date2016-06-12

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Cross-references

Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB2cv8crystal structure of trna-intron endonuclease from sulfolobus tokodaii
DBALI2cv8B 
JenaImageLibrary2cv8 
Target Sequence
UniProtKBA0A024R4N9RecName: Full=tRNA-splicing endonuclease subunit Sen34 {ECO:0000256|PIRNR:PIRNR017250};EC=4.6.1.16 {ECO:0000256|PIRNR:PIRNR017250};
UniProtKBA0A024R4N9 
PSI Structural Biology KnowledgebaseA0A024R4N9 
Protein Model PortalA0A024R4N9 
InterProA0A024R4N9 
PFAMA0A024R4N9 
ProdomA0A024R4N9 
UniProtKBA6NNB1RecName: Full=tRNA-splicing endonuclease subunit Sen34;EC=3.1.27.9;AltName: Full=Leukocyte receptor cluster member 5;AltName: Full=tRNA-intron endonuclease Sen34;Short=HsSen34;
UniProtKBA6NNB1 
PSI Structural Biology KnowledgebaseA6NNB1 
Protein Model PortalA6NNB1 
InterProA6NNB1 
PFAMA6NNB1 
ProdomA6NNB1 
UniProtKBB0V3J1RecName: Full=tRNA-splicing endonuclease subunit Sen34;EC=3.1.27.9;AltName: Full=Leukocyte receptor cluster member 5;AltName: Full=tRNA-intron endonuclease Sen34;Short=HsSen34;
UniProtKBB0V3J1 
PSI Structural Biology KnowledgebaseB0V3J1 
Protein Model PortalB0V3J1 
InterProB0V3J1 
PFAMB0V3J1 
ProdomB0V3J1 
UniProtKBG3QYS0RecName: Full=tRNA-splicing endonuclease subunit Sen34 {ECO:0000256|PIRNR:PIRNR017250};EC=4.6.1.16 {ECO:0000256|PIRNR:PIRNR017250};
UniProtKBG3QYS0 
PSI Structural Biology KnowledgebaseG3QYS0 
Protein Model PortalG3QYS0 
InterProG3QYS0 
PFAMG3QYS0 
ProdomG3QYS0 
UniProtKBH2R5V1RecName: Full=tRNA-splicing endonuclease subunit Sen34 {ECO:0000256|PIRNR:PIRNR017250};EC=4.6.1.16 {ECO:0000256|PIRNR:PIRNR017250};
UniProtKBH2R5V1 
PSI Structural Biology KnowledgebaseH2R5V1 
Protein Model PortalH2R5V1 
InterProH2R5V1 
PFAMH2R5V1 
ProdomH2R5V1 
UniProtKBQ9H6H5RecName: Full=tRNA-splicing endonuclease subunit Sen34;EC=3.1.27.9;AltName: Full=Leukocyte receptor cluster member 5;AltName: Full=tRNA-intron endonuclease Sen34;Short=HsSen34;
UniProtKBQ9H6H5 
PSI Structural Biology KnowledgebaseQ9H6H5 
Protein Model PortalQ9H6H5 
InterProQ9H6H5 
PFAMQ9H6H5 
ProdomQ9H6H5 
UniProtKBQ9BSV6RecName: Full=tRNA-splicing endonuclease subunit Sen34;EC=3.1.27.9;AltName: Full=Leukocyte receptor cluster member 5;AltName: Full=tRNA-intron endonuclease Sen34;Short=HsSen34;
UniProtKBQ9BSV6 
PSI Structural Biology KnowledgebaseQ9BSV6 
Protein Model PortalQ9BSV6 
InterProQ9BSV6 
PFAMQ9BSV6 
ProdomQ9BSV6 
UniProtKBQ9BVT1RecName: Full=tRNA-splicing endonuclease subunit Sen34;EC=3.1.27.9;AltName: Full=Leukocyte receptor cluster member 5;AltName: Full=tRNA-intron endonuclease Sen34;Short=HsSen34;
UniProtKBQ9BVT1 
PSI Structural Biology KnowledgebaseQ9BVT1 
Protein Model PortalQ9BVT1 
InterProQ9BVT1 
PFAMQ9BVT1 
ProdomQ9BVT1 
UniProtKBQ9BSV6LENG5 protein (Leukocyte receptor cluster (LRC) member 5)
UniProtKBQ9BSV6 
PSI Structural Biology KnowledgebaseQ9BSV6 
Protein Model PortalQ9BSV6 
InterProQ9BSV6 
PFAMQ9BSV6 
ProdomQ9BSV6 
UniProtKBH2R5V1SubName: Full=Uncharacterized protein;
UniProtKBH2R5V1 
PSI Structural Biology KnowledgebaseH2R5V1 
Protein Model PortalH2R5V1 
InterProH2R5V1 
PFAMH2R5V1 
ProdomH2R5V1 
UniProtKBA6NNB1Uncharacterized protein TSEN34 (TRNA splicing endonuclease 34 homolog(S. cerevisiae), isoform CRA_a) (tRNA splicing endonuclease 34homolog) (S. cerevisiae).
UniProtKBA6NNB1 
PSI Structural Biology KnowledgebaseA6NNB1 
Protein Model PortalA6NNB1 
InterProA6NNB1 
PFAMA6NNB1 
ProdomA6NNB1 
UniProtKBG3QYS0SubName: Full=Uncharacterized protein;
UniProtKBG3QYS0 
PSI Structural Biology KnowledgebaseG3QYS0 
Protein Model PortalG3QYS0 
InterProG3QYS0 
PFAMG3QYS0 
ProdomG3QYS0 
UniProtKBB0V3J1SubName: Full=tRNA splicing endonuclease 34 homolog (S. cerevisiae);
UniProtKBB0V3J1 
PSI Structural Biology KnowledgebaseB0V3J1 
Protein Model PortalB0V3J1 
InterProB0V3J1 
PFAMB0V3J1 
ProdomB0V3J1 
UniProtKBA6NNB1RecName: Full=tRNA-splicing endonuclease subunit Sen34;EC=4.6.1.16;AltName: Full=Leukocyte receptor cluster member 5;AltName: Full=tRNA-intron endonuclease Sen34;Short=HsSen34;
UniProtKBA6NNB1 
PSI Structural Biology KnowledgebaseA6NNB1 
Protein Model PortalA6NNB1 
InterProA6NNB1 
PFAMA6NNB1 
ProdomA6NNB1 
UniProtKBB0V3J1RecName: Full=tRNA-splicing endonuclease subunit Sen34;EC=4.6.1.16;AltName: Full=Leukocyte receptor cluster member 5;AltName: Full=tRNA-intron endonuclease Sen34;Short=HsSen34;
UniProtKBB0V3J1 
PSI Structural Biology KnowledgebaseB0V3J1 
Protein Model PortalB0V3J1 
InterProB0V3J1 
PFAMB0V3J1 
ProdomB0V3J1 
UniProtKBQ9BVT1RecName: Full=tRNA-splicing endonuclease subunit Sen34;EC=4.6.1.16;AltName: Full=Leukocyte receptor cluster member 5;AltName: Full=tRNA-intron endonuclease Sen34;Short=HsSen34;
UniProtKBQ9BVT1 
PSI Structural Biology KnowledgebaseQ9BVT1 
Protein Model PortalQ9BVT1 
InterProQ9BVT1 
PFAMQ9BVT1 
ProdomQ9BVT1 
UniProtKBQ9BSV6.1SEN34_HUMAN RecName: Full=tRNA-splicing endonuclease subunit Sen34; AltName: Full=Leukocyte receptor cluster member 5; AltName: Full=tRNA-intron endonuclease Sen34; Short=HsSen34
UniProtKBQ9BSV6.1 
PSI Structural Biology KnowledgebaseQ9BSV6.1 
Protein Model PortalQ9BSV6.1 
InterProQ9BSV6.1 
PFAMQ9BSV6.1 
ProdomQ9BSV6.1 
UniProtKBQ9H6H5RecName: Full=tRNA-splicing endonuclease subunit Sen34;EC=4.6.1.16;AltName: Full=Leukocyte receptor cluster member 5;AltName: Full=tRNA-intron endonuclease Sen34;Short=HsSen34;
UniProtKBQ9H6H5 
PSI Structural Biology KnowledgebaseQ9H6H5 
Protein Model PortalQ9H6H5 
InterProQ9H6H5 
PFAMQ9H6H5 
ProdomQ9H6H5 
UniProtKBQ9BSV6RecName: Full=tRNA-splicing endonuclease subunit Sen34;EC=4.6.1.16;AltName: Full=Leukocyte receptor cluster member 5;AltName: Full=tRNA-intron endonuclease Sen34;Short=HsSen34;
UniProtKBQ9BSV6 
PSI Structural Biology KnowledgebaseQ9BSV6 
Protein Model PortalQ9BSV6 
InterProQ9BSV6 
PFAMQ9BSV6 
ProdomQ9BSV6 
RefSeqXP_512887.2 PREDICTED: hypothetical protein isoform 6 [Pan troglodytes]
RefSeqNP_076980.2 tRNA-splicing endonuclease subunit Sen34 [Homo sapiens]
RefSeqNP_001070914.1 tRNA-splicing endonuclease subunit Sen34 [Homo sapiens]
RefSeqXP_001174912.1 PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
RefSeqXP_001174914.1 PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
RefSeqXP_001174919.1 PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
RefSeqXP_001174922.1 PREDICTED: hypothetical protein isoform 4 [Pan troglodytes]
RefSeqXP_001174924.1 PREDICTED: hypothetical protein isoform 5 [Pan troglodytes]
GenPept114679014 PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
GenPept114679012 PREDICTED: hypothetical protein isoform 5 [Pan troglodytes]
GenPept114679010 PREDICTED: tRNA-splicing endonuclease subunit Sen34 isoform 1 [Pan troglodytes]
GenPept114679008 PREDICTED: hypothetical protein isoform 6 [Pan troglodytes]
GenPept114679006 PREDICTED: hypothetical protein isoform 4 [Pan troglodytes]
GenPept114679004 PREDICTED: tRNA-splicing endonuclease subunit Sen34 isoform 3 [Pan troglodytes]
GenPept116875840 tRNA-splicing endonuclease subunit Sen34 [Homo sapiens]
GenPept116875842 tRNA-splicing endonuclease subunit Sen34 [Homo sapiens]
GenPept119592609tRNA splicing endonuclease 34 homolog (S. cerevisiae), isoform CRA_a
GenPept119592611tRNA splicing endonuclease 34 homolog (S. cerevisiae), isoform CRA_a
GenPept414691764Sequence 93 from patent US 8278085
GenPept18088781TRNA splicing endonuclease 34 homolog (S. cerevisiae)
GenPept169158360tRNA splicing endonuclease 34 homolog (S. cerevisiae)
GenPept159571310tRNA splicing endonuclease 34 homolog (S. cerevisiae)
GenPept14769539 LENG5 protein [Homo sapiens]
GenPept14769536 LENG5 protein [Homo sapiens]
GenPept13528654TSEN34 protein
GenPept119592613tRNA splicing endonuclease 34 homolog (S. cerevisiae), isoform CRA_a
GenPept50401668SEN34_HUMAN RecName: Full=tRNA-splicing endonuclease subunit Sen34; AltName: Full=Leukocyte receptor cluster member 5; AltName: Full=tRNA-intron endonuclease Sen34; Short=HsSen34
GenBankAAH20805.1 TRNA splicing endonuclease 34 homolog (S. cerevisiae) [Homo sapiens]
GenBankAAH04530.1 TSEN34 protein [Homo sapiens]
GenBankEAW72203.1 tRNA splicing endonuclease 34 homolog (S. cerevisiae), isoform CRA_a [Homo sapiens]
GenBankEAW72205.1 tRNA splicing endonuclease 34 homolog (S. cerevisiae), isoform CRA_a [Homo sapiens]
GenBankEAW72207.1 tRNA splicing endonuclease 34 homolog (S. cerevisiae), isoform CRA_a [Homo sapiens]
EMBLCAP19124.1 
EMBLCAQ09596.1 
UCSCGenomeBrowserQ9BSV6 
NP_001070914.1 
ENSEMBLENSP00000305524