University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P34935.2
Original Database ID sp P34935
Organism Sus scrofa
Annotation grp78_pig recname: full=78 kda
glucose-regulated protein; short=grp-78;
altname: full=heat shock 70 kda
protein 5; altname: full=immunoglobulin
heavy ...
Sequence Length 262

Dataset Information:

The newest dataset for this sequence was created on 2011-01-17. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region58-259
Protein Length262
Template PDB Code1dkxA
Template Region389-586
Sequence Identity52.00%
E-Value1e-62
GA3411.00
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Template Structure
PDB1dkxthe substrate binding domain of dnak in complex with a substrate peptide, determined from type 1 selenomethionyl crystals ; PFAM: PF00012 ; SCOP: 43315
DBALI1dkxA 
CATH2.60.34.10 Domain: 1dkxA01 Substrate Binding Domain Of DNAk; Chain A, domain 1 (100%)
CATH1.20.1270.10 Domain: 1dkxA02 Substrate Binding Domain Of Dnak; Chain:A; Domain 2 (79%)
JenaImageLibrary1dkx 
Target Sequence
UniProtKBP34935RecName: Full=78 kDa glucose-regulated protein;Short=GRP-78;AltName: Full=Heat shock 70 kDa protein 5;AltName: Full=Immunoglobulin heavy chain-binding protein;Short=BiP;Flags: Fragment;
UniProtKBP34935 
PSI Structural Biology KnowledgebaseP34935 
Protein Model PortalP34935 
InterProP34935 
PFAMP34935 
ProdomP34935 
UniProtKBP34935RecName: Full=78 kDa glucose-regulated protein;Short=GRP-78;AltName: Full=Heat shock 70 kDa protein 5;AltName: Full=Immunoglobulin heavy chain-binding protein;Short=BiP;Flags: Fragment;
UniProtKBP34935 
PSI Structural Biology KnowledgebaseP34935 
Protein Model PortalP34935 
InterProP34935 
PFAMP34935 
ProdomP34935 
UniProtKBP34935.2GRP78_PIG RecName: Full=78 kDa glucose-regulated protein; Short=GRP-78; AltName: Full=Heat shock 70 kDa protein 5; AltName: Full=Immunoglobulin heavy chain-binding protein; Short=BiP
UniProtKBP34935.2 
PSI Structural Biology KnowledgebaseP34935.2 
Protein Model PortalP34935.2 
InterProP34935.2 
PFAMP34935.2 
ProdomP34935.2 
GenPept14916993GRP78_PIG RecName: Full=78 kDa glucose-regulated protein; Short=GRP-78; AltName: Full=Heat shock 70 kDa protein 5; AltName: Full=Immunoglobulin heavy chain-binding protein; Short=BiP