Home
Home
Structure Similarity pdbe.org/fold
Bringing Structure to Biology
wwPDB EMDB
 

 
Structure Alignment Results help  
 
No non-identical matches were found at similarity levels of your query (70:70). The results below are only samples of matches with lower similarity. In order to get a full list of closest matches, repeat your query with similarity levels 50:60 or lower.
 
Query: pdb entry 2cfp:A , 417 residues  
SUGAR FREE LACTOSE PERMEASE AT ACIDIC PH 
Examined 76952 entries (192118 chains),
Matches 1-20 of 91. 		  
resort results  
 ##   Scoring  help  Rmsd  Nalgn Ng %seq Query Target (PDB entry)
 Q   P   Z  %sse Match %sse Nres × Title
1 1.00 79.6 26.9 0.00 417 0 100 100 2cfp:A 100 417 SUGAR FREE LACTOSE PERMEASE AT ACIDIC PH
2 0.67 7.6 9.0 1.18 367 19 98 53 2v8n:B 63 417 WILD-TYPE STRUCTURE OF LACTOSE PERMEASE
3 0.67 7.7 9.0 1.16 366 19 99 53 2v8n:A 63 417 WILD-TYPE STRUCTURE OF LACTOSE PERMEASE
4 0.63 12.0 10.2 1.06 351 14 99 37 1pv6:A 44 417 CRYSTAL STRUCTURE OF LACTOSE PERMEASE
5 0.63 11.9 10.2 1.06 351 14 99 37 1pv6:B 44 417 CRYSTAL STRUCTURE OF LACTOSE PERMEASE
6 0.35 4.8 8.1 1.87 291 15 96 32 2cfq:A 38 417 SUGAR FREE LACTOSE PERMEASE AT NEUTRAL PH
7 0.26 2.7 7.9 1.43 235 10 97 32 1pv7:A 38 417 CRYSTAL STRUCTURE OF LACTOSE PERMEASE WITH TDG
8 0.030 -0.0 1.1 4.88 143 11 8 21 2fec:B 22 441 STRUCTURE OF THE E203Q MUTANT OF THE CL-/H+ EXCHANGER CLC- EC1 FROM E.COLI
9 0.030 -0.0 1.1 4.88 142 12 8 21 2fec:A 22 444 STRUCTURE OF THE E203Q MUTANT OF THE CL-/H+ EXCHANGER CLC- EC1 FROM E.COLI
10 0.029 -0.0 1.0 4.87 139 12 9 21 2fed:B 22 441 STRUCTURE OF THE E203Q MUTANT OF THE CL-/H+ EXCHANGER CLC- EC1 FROM E.COLI
11 0.029 -0.0 1.0 4.68 135 11 9 21 2fed:A 22 444 STRUCTURE OF THE E203Q MUTANT OF THE CL-/H+ EXCHANGER CLC- EC1 FROM E.COLI
12 0.026 -0.0 0.9 5.19 107 6 3 21 3qhr:D 27 261 STRUCTURE OF A PCDK2/CYCLINA TRANSITION-STATE MIMIC
13 0.026 -0.0 0.2 4.92 115 12 6 21 1mkd:A 25 328 CRYSTAL STRUCTURE OF PDE4D CATALYTIC DOMAIN AND ZARDAVERINE COMPLEX
14 0.025 -0.0 0.2 5.02 115 9 8 21 1mkd:D 25 328 CRYSTAL STRUCTURE OF PDE4D CATALYTIC DOMAIN AND ZARDAVERINE COMPLEX
15 0.025 -0.0 0.2 5.02 115 9 8 21 1mkd:I 25 328 CRYSTAL STRUCTURE OF PDE4D CATALYTIC DOMAIN AND ZARDAVERINE COMPLEX
16 0.025 -0.0 0.2 4.81 111 9 7 21 1mkd:H 25 328 CRYSTAL STRUCTURE OF PDE4D CATALYTIC DOMAIN AND ZARDAVERINE COMPLEX
17 0.025 -0.0 0.2 4.81 111 9 7 21 1mkd:G 25 328 CRYSTAL STRUCTURE OF PDE4D CATALYTIC DOMAIN AND ZARDAVERINE COMPLEX
18 0.025 -0.0 0.2 4.81 111 9 7 21 1mkd:J 25 328 CRYSTAL STRUCTURE OF PDE4D CATALYTIC DOMAIN AND ZARDAVERINE COMPLEX
19 0.025 -0.0 0.2 4.59 107 11 7 21 1mkd:B 25 328 CRYSTAL STRUCTURE OF PDE4D CATALYTIC DOMAIN AND ZARDAVERINE COMPLEX
20 0.025 -0.0 0.2 4.59 107 11 7 21 1mkd:C 25 328 CRYSTAL STRUCTURE OF PDE4D CATALYTIC DOMAIN AND ZARDAVERINE COMPLEX
Examined 76952 entries (192118 chains),
Matches 1-20 of 91. 		  

Sort by       arrange by SCOP family     match  
   

DOWNLOAD:
Summary of all results as a plain text file   
All results as XML file
 
FOR ALL CHECKED MATCHES
Download target sequences (FASTA format)
Download aligned sequences (FASTA format)
Submit for Multiple Alignment    include query
Bring on top of results
Uncheck all
 

 
 DOWNLOAD  in match range from      to     :
Target sequences (FASTA format)
Aligned sequences (FASTA format)
 

 

 
 PDBe Fold v2.50 15 Nov 2011