Structure Similarity pdbe.org/fold
Bringing Structure to Biology
wwPDB EMDB
 

 
Structure Alignment Results help  
 
Query: pdb2ls8.ent:A, 142 residues  

Examined 78163 entries (194715 chains),
Matches 1-20 of 131.
  
re-sort results
  
 ##   Scoring  help RMSD Nalign Ng %seq Query Target (PDB entry)
Q P Z %sse Match %sse Nres × Title
1 0.63 9.0 9.1 1.64 121 4 27 86 2py2:E 75 127 STRUCTURE OF HERRING TYPE II ANTIFREEZE PROTEIN
2 0.62 9.7 9.2 1.66 121 4 26 86 2py2:A 100 127 STRUCTURE OF HERRING TYPE II ANTIFREEZE PROTEIN
3 0.62 9.3 9.2 1.68 121 4 27 86 2py2:F 75 127 STRUCTURE OF HERRING TYPE II ANTIFREEZE PROTEIN
4 0.62 9.1 9.1 1.68 121 4 26 86 2py2:D 75 127 STRUCTURE OF HERRING TYPE II ANTIFREEZE PROTEIN
5 0.62 8.4 8.8 1.48 117 5 34 86 1tdq:B 75 126 STRUCTURAL BASIS FOR THE INTERACTIONS BETWEEN TENASCINS AND THE C-TYPE LECTIN DOMAINS FROM LECTICANS: EVIDENCE FOR A CROSS-LINKING ROLE FOR TENASCINS
6 0.62 9.4 9.0 1.70 121 4 27 86 2py2:C 100 127 STRUCTURE OF HERRING TYPE II ANTIFREEZE PROTEIN
7 0.61 9.4 9.0 1.59 119 4 28 86 2py2:B 100 127 STRUCTURE OF HERRING TYPE II ANTIFREEZE PROTEIN
8 0.60 9.2 8.9 1.62 120 5 27 86 2zib:A 100 130 CRYSTAL STRUCTURE ANALYSIS OF CALCIUM-INDEPENDENT TYPE II ANTIFREEZE PROTEIN
9 0.59 8.7 8.6 1.76 120 5 28 86 2bph:A 100 128 STRUCTURE OF MURINE DECTIN-1
10 0.59 5.8 7.0 1.54 116 6 37 86 1k9j:B 86 128 COMPLEX OF DC-SIGNR AND GLCNAC2MAN3
11 0.58 6.7 7.5 1.64 112 6 29 86 1e8i:B 100 117 HUMAN CD69 - TETRAGONAL FORM
12 0.58 6.6 7.5 1.38 113 5 28 86 1dv8:A 100 128 CRYSTAL STRUCTURE OF THE CARBOHYDRATE RECOGNITION DOMAIN OF THE H1 SUBUNIT OF THE ASIALOGLYCOPROTEIN RECEPTOR
13 0.58 6.3 7.3 1.67 112 7 29 86 1e87:A 100 117 HUMAN CD69 - TRIGONAL FORM
14 0.57 9.7 9.2 1.71 117 6 29 86 2bpd:A 100 127 STRUCTURE OF MURINE DECTIN-1
15 0.57 6.8 7.6 1.47 114 7 28 86 2ox8:A 100 129 HUMAN SCAVENGER RECEPTOR C-TYPE LECTIN CARBOHYDRATE- RECOGNITION DOMAIN.
16 0.57 7.9 8.5 1.70 117 7 26 86 2bph:B 75 128 STRUCTURE OF MURINE DECTIN-1
17 0.57 8.0 8.6 1.67 117 7 27 86 2bpd:B 75 129 STRUCTURE OF MURINE DECTIN-1
18 0.57 5.2 6.8 1.70 112 6 29 71 3cck:B 100 118 HUMAN CD69
19 0.57 6.4 7.4 1.70 112 6 29 71 3hup:B 83 118 HIGH-RESOLUTION STRUCTURE OF THE EXTRACELLULAR DOMAIN OF HUMAN CD69
20 0.57 6.5 7.6 1.54 114 6 37 86 3p5g:A 75 128 STRUCTURE OF THE CARBOHYDRATE-RECOGNITION DOMAIN OF HUMAN LANGERIN WITH BLOOD GROUP B TRISACCHARIDE (GAL ALPHA1-3(FUC ALPHA1-2)GAL)
Examined 78163 entries (194715 chains),
Matches 1-20 of 131.
  

Sort by       arrange by SCOP family     match  
   

DOWNLOAD:
Summary of all results as a plain text file   
All results as XML file
 
FOR ALL CHECKED MATCHES
Download target sequences (FASTA format)
Download aligned sequences (FASTA format)
Submit for Multiple Alignment    include query
Bring on top of results
Uncheck all
 

 

 DOWNLOAD  in match range from      to     :
Target sequences (FASTA format)
Aligned sequences (FASTA format)
 

 

 
 PDBe Fold v2.51 28 Mar 2012